RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ZFYVE16Q7Z3T8 1539 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 ADGRF5Q8IZF2 1346 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 WWC1Q8IX03 1113 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 CHD1O14646 1710 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 SLC4A3P48751 1232 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.46□□□□□ -1.79e-7■■□□□ 12.9
CHD9-213ENST00000564845 PRKRIP1Q9H875 184 aaPredicted RBP4.46□□□□□ -1.7
CHD9-213ENST00000564845 KIF15Q9NS87 1388 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 SYCP2Q9BX26 1530 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 DISP3Q9P2K9 1392 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 DMRT2Q9Y5R5 561 aa4.46□□□□□ -1.7
CHD9-213ENST00000564845 LAMA2P24043 3122 aaKnown RBP4.45□□□□□ -1.7
CHD9-213ENST00000564845 CABP2Q9NPB3 220 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 SZT2Q5T011 3432 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 IQGAP3Q86VI3 1631 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 FAM69CQ0P6D2 419 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 MYOM1P52179 1685 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 COL17A1Q9UMD9 1497 aaPredicted RBP4.45□□□□□ -1.7
CHD9-213ENST00000564845 TRPM1Q7Z4N2 1603 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 WAPLQ7Z5K2 1190 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 ZRANB1Q9UGI0 708 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 USP47Q96K76 1375 aa4.45□□□□□ -1.7
CHD9-213ENST00000564845 HMGB1P09429 215 aaKnown RBP4.45□□□□□ -1.7
CHD9-213ENST00000564845 ANKRD50Q9ULJ7 1429 aa4.44□□□□□ -1.7
CHD9-213ENST00000564845 ELL2O00472 640 aaPredicted RBP4.44□□□□□ -1.7
CHD9-213ENST00000564845 SLC12A5Q9H2X9 1139 aa4.44□□□□□ -1.7
CHD9-213ENST00000564845 CLUAP1Q96AJ1 413 aa4.44□□□□□ -1.7
CHD9-213ENST00000564845 ARXQ96QS3 562 aa4.44□□□□□ -1.7
CHD9-213ENST00000564845 RALGAPBQ86X10 1494 aa4.44□□□□□ -1.7
CHD9-213ENST00000564845 FAM135AQ9P2D6 1515 aa4.44□□□□□ -1.7
CHD9-213ENST00000564845 LAS1LQ9Y4W2 734 aaKnown RBP4.44□□□□□ -1.7
CHD9-213ENST00000564845 MINK1Q8N4C8 1332 aaPredicted RBP4.44□□□□□ -1.7
CHD9-213ENST00000564845 NLRP1Q9C000 1473 aa4.44□□□□□ -1.7
CHD9-213ENST00000564845 SPINK5Q9NQ38 1064 aaPredicted RBP4.44□□□□□ -1.7
CHD9-213ENST00000564845 XPCQ01831 940 aaPredicted RBP4.43□□□□□ -1.7
CHD9-213ENST00000564845 STAG3Q9UJ98 1225 aa4.43□□□□□ -1.7
CHD9-213ENST00000564845 LAMC1P11047 1609 aa4.43□□□□□ -1.7
CHD9-213ENST00000564845 KIDINS220Q9ULH0 1771 aa4.43□□□□□ -1.7
CHD9-213ENST00000564845 PLCH2O75038 1416 aa4.43□□□□□ -1.7
CHD9-213ENST00000564845 ZBTB47Q9UFB7 747 aaPredicted RBP4.43□□□□□ -1.7
CHD9-213ENST00000564845 SPAG9O60271 1321 aaKnown RBP4.43□□□□□ -1.7
CHD9-213ENST00000564845 EYSQ5T1H1 3165 aa4.43□□□□□ -1.7
CHD9-213ENST00000564845 C9orf84Q5VXU9 1444 aa4.43□□□□□ -1.7
CHD9-213ENST00000564845 NPM1P06748 294 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHD9-213ENST00000564845 PRAG1Q86YV5 1406 aa4.43□□□□□ -1.7
CHD9-213ENST00000564845 EXOC6Q8TAG9 804 aa4.43□□□□□ -1.7
CHD9-213ENST00000564845 CDCA8Q53HL2 280 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 DTNBO60941 627 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 STAC3Q96MF2 364 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 ASXL1Q8IXJ9 1541 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 OSCARQ8IYS5 282 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 IFT172Q9UG01 1749 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 LMTK2Q8IWU2 1503 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 CARMIL2Q6F5E8 1435 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 MSH5O43196 834 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 ADAMTS8Q9UP79 889 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 CCDC7Q96M83 1385 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 ZNF521Q96K83 1311 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 SPRYD3Q8NCJ5 442 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 GGNBP2Q9H3C7 697 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 PIK3C2BO00750 1634 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 PRKCSHP14314 528 aaPredicted RBP4.42□□□□□ -1.7
CHD9-213ENST00000564845 TSPOAP1O95153 1857 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 WASHC2CQ9Y4E1 1318 aa4.42□□□□□ -1.7
CHD9-213ENST00000564845 FRAT1Q92837 279 aaPredicted RBP4.42□□□□□ -1.7
CHD9-213ENST00000564845 NECTIN2Q92692 538 aa4.41□□□□□ -1.7
CHD9-213ENST00000564845 IL27Q8NEV9 243 aa4.41□□□□□ -1.7
CHD9-213ENST00000564845 SLC26A8Q96RN1 970 aa4.41□□□□□ -1.7
CHD9-213ENST00000564845 MADDQ8WXG6 1647 aa4.41□□□□□ -1.7
CHD9-213ENST00000564845 BCAR3O75815 825 aa4.41□□□□□ -1.7
CHD9-213ENST00000564845 THUMPD2Q9BTF0 503 aaKnown RBP4.41□□□□□ -1.7
CHD9-213ENST00000564845 RBM19Q9Y4C8 960 aaKnown RBP4.41□□□□□ -1.7
CHD9-213ENST00000564845 ERBINQ96RT1 1412 aa4.41□□□□□ -1.7
CHD9-213ENST00000564845 DDX17Q92841 729 aaKnown RBP4.41□□□□□ -1.7
CHD9-213ENST00000564845 ZCCHC11Q5TAX3 1644 aaKnown RBP4.41□□□□□ -1.7
CHD9-213ENST00000564845 C14orf37Q86TY3 774 aa4.41□□□□□ -1.7
CHD9-213ENST00000564845 HMOX1P09601 288 aa4.4□□□□□ -1.7
CHD9-213ENST00000564845 TXNDC2Q86VQ3 553 aa4.4□□□□□ -1.7
CHD9-213ENST00000564845 USP35Q9P2H5 1018 aa4.4□□□□□ -1.7
CHD9-213ENST00000564845 ADGBQ8N7X0 1667 aa4.4□□□□□ -1.7
CHD9-213ENST00000564845 PMFBP1Q8TBY8 1022 aa4.4□□□□□ -1.7
CHD9-213ENST00000564845 ANP32BQ92688 251 aaKnown RBP4.4□□□□□ -1.7
CHD9-213ENST00000564845 ABCC3O15438 1527 aa4.4□□□□□ -1.7
CHD9-213ENST00000564845 U2SURPO15042 1029 aaKnown RBP4.4□□□□□ -1.7
CHD9-213ENST00000564845 ITSN2Q9NZM3 1697 aa4.4□□□□□ -1.7
CHD9-213ENST00000564845 ANKRD30AQ9BXX3 1397 aa4.4□□□□□ -1.7
CHD9-213ENST00000564845 IQGAP1P46940 1657 aa4.4□□□□□ -1.71
CHD9-213ENST00000564845 ZMYM4Q5VZL5 1548 aa4.4□□□□□ -1.71
CHD9-213ENST00000564845 SRPK2P78362 688 aaKnown RBP4.4□□□□□ -1.71
CHD9-213ENST00000564845 PARD3Q8TEW0 1356 aa4.4□□□□□ -1.71
CHD9-213ENST00000564845 RGS3P49796 1198 aa4.4□□□□□ -1.71
CHD9-213ENST00000564845 DCTN1Q14203 1278 aa4.4□□□□□ -1.71
CHD9-213ENST00000564845 LMOD2Q6P5Q4 547 aa4.4□□□□□ -1.71
CHD9-213ENST00000564845 PHF23Q9BUL5 403 aaPredicted RBP4.4□□□□□ -1.71
CHD9-213ENST00000564845 TPRNQ4KMQ1 711 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 CCDC141Q6ZP82 1450 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 PKNOX2Q96KN3 472 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 TRPM2O94759 1503 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 APAF1O14727 1248 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 HDGFP51858 240 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms