RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 NOS1P29475 1434 aa10.6□□□□□ -0.71
MAP1LC3B-205ENST00000564638 PIK3C2BO00750 1634 aa10.6□□□□□ -0.71
MAP1LC3B-205ENST00000564638 CHGAP10645 457 aaKnown RBP10.59□□□□□ -0.71
MAP1LC3B-205ENST00000564638 MPHOSPH9Q99550 1183 aa10.59□□□□□ -0.71
MAP1LC3B-205ENST00000564638 UBR1Q8IWV7 1749 aa10.58□□□□□ -0.72
MAP1LC3B-205ENST00000564638 PPP1R15AO75807 674 aaPredicted RBP10.58□□□□□ -0.72
MAP1LC3B-205ENST00000564638 IDI1Q13907 227 aa10.58□□□□□ -0.72
MAP1LC3B-205ENST00000564638 MYO5BQ9ULV0 1848 aa10.58□□□□□ -0.72
MAP1LC3B-205ENST00000564638 PLA2R1Q13018 1463 aa10.57□□□□□ -0.72
MAP1LC3B-205ENST00000564638 POTEAQ6S8J7 498 aa10.57□□□□□ -0.72
MAP1LC3B-205ENST00000564638 THEMISQ8N1K5 641 aaPredicted RBP10.57□□□□□ -0.72
MAP1LC3B-205ENST00000564638 SCAF1Q9H7N4 1312 aaKnown RBP10.57□□□□□ -0.72
MAP1LC3B-205ENST00000564638 SLC52A1Q9NWF4 448 aa10.56□□□□□ -0.72
MAP1LC3B-205ENST00000564638 ADGRB3O60242 1522 aa10.56□□□□□ -0.72
MAP1LC3B-205ENST00000564638 POLR1AO95602 1720 aaPredicted RBP10.55□□□□□ -0.72
MAP1LC3B-205ENST00000564638 CLTCL1P53675 1640 aa10.55□□□□□ -0.72
MAP1LC3B-205ENST00000564638 ANKRD30BQ9BXX2 1392 aa10.54□□□□□ -0.72
MAP1LC3B-205ENST00000564638 TRPM2O94759 1503 aa10.54□□□□□ -0.72
MAP1LC3B-205ENST00000564638 TOM1O60784 492 aa10.54□□□□□ -0.72
MAP1LC3B-205ENST00000564638 KIF1BO60333 1816 aa10.54□□□□□ -0.72
MAP1LC3B-205ENST00000564638 NEURL4Q96JN8 1562 aa10.53□□□□□ -0.72
MAP1LC3B-205ENST00000564638 ANKLE2Q86XL3 938 aa10.53□□□□□ -0.72
MAP1LC3B-205ENST00000564638 KDM5AP29375 1690 aaKnown RBP10.53□□□□□ -0.72
MAP1LC3B-205ENST00000564638 TMEM131LA2VDJ0 1609 aa10.52□□□□□ -0.73
MAP1LC3B-205ENST00000564638 SETD1AO15047 1707 aaKnown RBP10.52□□□□□ -0.73
MAP1LC3B-205ENST00000564638 CENPBP07199 599 aaPredicted RBP10.51□□□□□ -0.73
MAP1LC3B-205ENST00000564638 ZNF326Q5BKZ1 582 aaKnown RBP10.51□□□□□ -0.73
MAP1LC3B-205ENST00000564638 MIER1Q8N108 512 aa10.51□□□□□ -0.73
MAP1LC3B-205ENST00000564638 EID1Q9Y6B2 187 aa10.51□□□□□ -0.73
MAP1LC3B-205ENST00000564638 CPS1P31327 1500 aa10.51□□□□□ -0.73
MAP1LC3B-205ENST00000564638 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
MAP1LC3B-205ENST00000564638 TXNDC2Q86VQ3 553 aa10.5□□□□□ -0.73
MAP1LC3B-205ENST00000564638 TMEM2Q9UHN6 1383 aa10.5□□□□□ -0.73
MAP1LC3B-205ENST00000564638 RIMS2Q9UQ26 1411 aa10.5□□□□□ -0.73
MAP1LC3B-205ENST00000564638 SCAF11Q99590 1463 aaKnown RBP10.49□□□□□ -0.73
MAP1LC3B-205ENST00000564638 ARHGAP23Q9P227 1491 aa10.49□□□□□ -0.73
MAP1LC3B-205ENST00000564638 SLIT1O75093 1534 aa10.49□□□□□ -0.73
MAP1LC3B-205ENST00000564638 LTKP29376 864 aa10.49□□□□□ -0.73
MAP1LC3B-205ENST00000564638 NUTM2DQ5VT03 806 aaPredicted RBP10.49□□□□□ -0.73
MAP1LC3B-205ENST00000564638 BCANQ96GW7 911 aa10.49□□□□□ -0.73
MAP1LC3B-205ENST00000564638 NPHP4O75161 1426 aaPredicted RBP10.49□□□□□ -0.73
MAP1LC3B-205ENST00000564638 IQGAP1P46940 1657 aa10.48□□□□□ -0.73
MAP1LC3B-205ENST00000564638 STRCP1A6NGW2 1772 aa10.48□□□□□ -0.73
MAP1LC3B-205ENST00000564638 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
MAP1LC3B-205ENST00000564638 RGL3Q3MIN7 710 aa10.46□□□□□ -0.73
MAP1LC3B-205ENST00000564638 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.46□□□□□ -0.73
MAP1LC3B-205ENST00000564638 ZFYVE9O95405 1425 aa10.46□□□□□ -0.74
MAP1LC3B-205ENST00000564638 MED14O60244 1454 aa10.45□□□□□ -0.74
MAP1LC3B-205ENST00000564638 L3MBTL2Q969R5 705 aa10.45□□□□□ -0.74
MAP1LC3B-205ENST00000564638 NEXMIFQ5QGS0 1516 aa10.44□□□□□ -0.74
MAP1LC3B-205ENST00000564638 LRRC7Q96NW7 1537 aa10.43□□□□□ -0.74
MAP1LC3B-205ENST00000564638 UPF1Q92900 1129 aaKnown RBP eCLIP10.43□□□□□ -0.74
MAP1LC3B-205ENST00000564638 SLC26A8Q96RN1 970 aa10.43□□□□□ -0.74
MAP1LC3B-205ENST00000564638 PPLO60437 1756 aa10.43□□□□□ -0.74
MAP1LC3B-205ENST00000564638 PLEKHG1Q9ULL1 1385 aa10.42□□□□□ -0.74
MAP1LC3B-205ENST00000564638 EIF4G2P78344 907 aaKnown RBP eCLIP10.41□□□□□ -0.74
MAP1LC3B-205ENST00000564638 SPATA31E1Q6ZUB1 1445 aa10.41□□□□□ -0.74
MAP1LC3B-205ENST00000564638 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.74
MAP1LC3B-205ENST00000564638 YTHDC1Q96MU7 727 aaKnown RBP10.4□□□□□ -0.74
MAP1LC3B-205ENST00000564638 IFT172Q9UG01 1749 aa10.4□□□□□ -0.74
MAP1LC3B-205ENST00000564638 RALGAPBQ86X10 1494 aa10.39□□□□□ -0.75
MAP1LC3B-205ENST00000564638 VGFO15240 615 aaPredicted RBP10.39□□□□□ -0.75
MAP1LC3B-205ENST00000564638 HSPA5P11021 654 aaKnown RBP10.39□□□□□ -0.75
MAP1LC3B-205ENST00000564638 DDX10Q13206 875 aaKnown RBP10.39□□□□□ -0.75
MAP1LC3B-205ENST00000564638 NRXN3Q9Y4C0 1643 aa10.38□□□□□ -0.75
MAP1LC3B-205ENST00000564638 HIRIP3Q9BW71 556 aaPredicted RBP10.38□□□□□ -0.75
MAP1LC3B-205ENST00000564638 KDM2AQ9Y2K7 1162 aa10.38□□□□□ -0.75
MAP1LC3B-205ENST00000564638 DIP2AQ14689 1571 aa10.38□□□□□ -0.75
MAP1LC3B-205ENST00000564638 XIRP1Q702N8 1843 aaKnown RBP10.37□□□□□ -0.75
MAP1LC3B-205ENST00000564638 ADGRF5Q8IZF2 1346 aa10.37□□□□□ -0.75
MAP1LC3B-205ENST00000564638 NBPF8Q3BBV2 869 aa10.37□□□□□ -0.75
MAP1LC3B-205ENST00000564638 ADAMTS13Q76LX8 1427 aa10.37□□□□□ -0.75
MAP1LC3B-205ENST00000564638 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
MAP1LC3B-205ENST00000564638 KCNA4P22459 653 aa10.36□□□□□ -0.75
MAP1LC3B-205ENST00000564638 DCAF11Q8TEB1 546 aa10.36□□□□□ -0.75
MAP1LC3B-205ENST00000564638 TBX22Q9Y458 520 aa10.36□□□□□ -0.75
MAP1LC3B-205ENST00000564638 CHD2O14647 1828 aaKnown RBP10.35□□□□□ -0.75
MAP1LC3B-205ENST00000564638 ANP32CO43423 234 aa10.35□□□□□ -0.75
MAP1LC3B-205ENST00000564638 LAMC1P11047 1609 aa10.34□□□□□ -0.75
MAP1LC3B-205ENST00000564638 TRPM1Q7Z4N2 1603 aa10.34□□□□□ -0.75
MAP1LC3B-205ENST00000564638 KCNA6P17658 529 aa10.34□□□□□ -0.75
MAP1LC3B-205ENST00000564638 MYOM2P54296 1465 aa10.34□□□□□ -0.75
MAP1LC3B-205ENST00000564638 PPP4R3CPQ6ZMV5 832 aa10.33□□□□□ -0.76
MAP1LC3B-205ENST00000564638 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
MAP1LC3B-205ENST00000564638 USP47Q96K76 1375 aa10.33□□□□□ -0.76
MAP1LC3B-205ENST00000564638 CCDC7Q96M83 1385 aa10.33□□□□□ -0.76
MAP1LC3B-205ENST00000564638 NWD1Q149M9 1564 aa10.33□□□□□ -0.76
MAP1LC3B-205ENST00000564638 FAM135BQ49AJ0 1406 aa10.33□□□□□ -0.76
MAP1LC3B-205ENST00000564638 METP08581 1390 aa10.32□□□□□ -0.76
MAP1LC3B-205ENST00000564638 RBM33Q96EV2 1170 aaKnown RBP10.32□□□□□ -0.76
MAP1LC3B-205ENST00000564638 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
MAP1LC3B-205ENST00000564638 PIK3C2GO75747 1445 aa10.32□□□□□ -0.76
MAP1LC3B-205ENST00000564638 PTPRUQ92729 1446 aa10.32□□□□□ -0.76
MAP1LC3B-205ENST00000564638 WASHC2AQ641Q2 1341 aa10.32□□□□□ -0.76
MAP1LC3B-205ENST00000564638 NKTRP30414 1462 aaKnown RBP10.31□□□□□ -0.76
MAP1LC3B-205ENST00000564638 PIK3R4Q99570 1358 aa10.31□□□□□ -0.76
MAP1LC3B-205ENST00000564638 CCER2I3L3R5 266 aa10.31□□□□□ -0.76
MAP1LC3B-205ENST00000564638 PRAG1Q86YV5 1406 aa10.31□□□□□ -0.76
MAP1LC3B-205ENST00000564638 EP400Q96L91 3159 aa10.3□□□□□ -0.76
MAP1LC3B-205ENST00000564638 MSH5O43196 834 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms