RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
MAP1LC3B-205ENST00000564638 ABCC9O60706 1549 aa15.33■□□□□ 0.05
MAP1LC3B-205ENST00000564638 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
MAP1LC3B-205ENST00000564638 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
MAP1LC3B-205ENST00000564638 AEBP2Q6ZN18 517 aaPredicted RBP14.48□□□□□ -0.09
MAP1LC3B-205ENST00000564638 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
MAP1LC3B-205ENST00000564638 CHIC1Q5VXU3 224 aa14.31□□□□□ -0.12
MAP1LC3B-205ENST00000564638 ZCCHC6Q5VYS8 1495 aaKnown RBP14.28□□□□□ -0.12
MAP1LC3B-205ENST00000564638 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
MAP1LC3B-205ENST00000564638 NACADO15069 1562 aa14.25□□□□□ -0.13
MAP1LC3B-205ENST00000564638 DNAJC5Q9H3Z4 198 aa14.24□□□□□ -0.13
MAP1LC3B-205ENST00000564638 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
MAP1LC3B-205ENST00000564638 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
MAP1LC3B-205ENST00000564638 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
MAP1LC3B-205ENST00000564638 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
MAP1LC3B-205ENST00000564638 BICRAQ9NZM4 1560 aa14.01□□□□□ -0.17
MAP1LC3B-205ENST00000564638 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
MAP1LC3B-205ENST00000564638 CECR2Q9BXF3 1484 aa13.86□□□□□ -0.19
MAP1LC3B-205ENST00000564638 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
MAP1LC3B-205ENST00000564638 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
MAP1LC3B-205ENST00000564638 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
MAP1LC3B-205ENST00000564638 CUX2O14529 1486 aa13.42□□□□□ -0.26
MAP1LC3B-205ENST00000564638 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
MAP1LC3B-205ENST00000564638 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.29
MAP1LC3B-205ENST00000564638 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
MAP1LC3B-205ENST00000564638 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.29
MAP1LC3B-205ENST00000564638 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
MAP1LC3B-205ENST00000564638 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
MAP1LC3B-205ENST00000564638 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
MAP1LC3B-205ENST00000564638 NCAPD3P42695 1498 aa13.11□□□□□ -0.31
MAP1LC3B-205ENST00000564638 WIZO95785 1651 aa13.11□□□□□ -0.31
MAP1LC3B-205ENST00000564638 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
MAP1LC3B-205ENST00000564638 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
MAP1LC3B-205ENST00000564638 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
MAP1LC3B-205ENST00000564638 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
MAP1LC3B-205ENST00000564638 NESP48681 1621 aa13.05□□□□□ -0.32
MAP1LC3B-205ENST00000564638 THOC2Q8NI27 1593 aaKnown RBP13.01□□□□□ -0.33
MAP1LC3B-205ENST00000564638 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
MAP1LC3B-205ENST00000564638 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
MAP1LC3B-205ENST00000564638 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
MAP1LC3B-205ENST00000564638 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
MAP1LC3B-205ENST00000564638 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
MAP1LC3B-205ENST00000564638 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
MAP1LC3B-205ENST00000564638 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.38
MAP1LC3B-205ENST00000564638 CFTRP13569 1480 aa12.7□□□□□ -0.38
MAP1LC3B-205ENST00000564638 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
MAP1LC3B-205ENST00000564638 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
MAP1LC3B-205ENST00000564638 RIMBP3CA6NJZ7 1639 aa12.66□□□□□ -0.38
MAP1LC3B-205ENST00000564638 RIMBP3BA6NNM3 1639 aa12.66□□□□□ -0.38
MAP1LC3B-205ENST00000564638 RIMBP3Q9UFD9 1639 aa12.66□□□□□ -0.38
MAP1LC3B-205ENST00000564638 WDR62O43379 1518 aa12.65□□□□□ -0.38
MAP1LC3B-205ENST00000564638 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
MAP1LC3B-205ENST00000564638 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
MAP1LC3B-205ENST00000564638 CEP164Q9UPV0 1460 aa12.63□□□□□ -0.39
MAP1LC3B-205ENST00000564638 MRC2Q9UBG0 1479 aa12.62□□□□□ -0.39
MAP1LC3B-205ENST00000564638 ARHGEF11O15085 1522 aa12.55□□□□□ -0.4
MAP1LC3B-205ENST00000564638 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
MAP1LC3B-205ENST00000564638 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.41
MAP1LC3B-205ENST00000564638 DNMBPQ6XZF7 1577 aa12.45□□□□□ -0.42
MAP1LC3B-205ENST00000564638 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
MAP1LC3B-205ENST00000564638 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
MAP1LC3B-205ENST00000564638 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
MAP1LC3B-205ENST00000564638 ARAP1Q96P48 1450 aa12.41□□□□□ -0.42
MAP1LC3B-205ENST00000564638 CUX1P39880 1505 aa12.39□□□□□ -0.43
MAP1LC3B-205ENST00000564638 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
MAP1LC3B-205ENST00000564638 POLA1P09884 1462 aaPredicted RBP12.35□□□□□ -0.43
MAP1LC3B-205ENST00000564638 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
MAP1LC3B-205ENST00000564638 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
MAP1LC3B-205ENST00000564638 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
MAP1LC3B-205ENST00000564638 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
MAP1LC3B-205ENST00000564638 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
MAP1LC3B-205ENST00000564638 BIVM-ERCC5R4GMW8 1640 aa12.31□□□□□ -0.44
MAP1LC3B-205ENST00000564638 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
MAP1LC3B-205ENST00000564638 SOGA1O94964 1423 aa12.3□□□□□ -0.44
MAP1LC3B-205ENST00000564638 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
MAP1LC3B-205ENST00000564638 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
MAP1LC3B-205ENST00000564638 ILDR1Q86SU0 546 aaPredicted RBP12.26□□□□□ -0.45
MAP1LC3B-205ENST00000564638 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
MAP1LC3B-205ENST00000564638 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
MAP1LC3B-205ENST00000564638 TDRD9Q8NDG6 1382 aaKnown RBP12.23□□□□□ -0.45
MAP1LC3B-205ENST00000564638 CHD1O14646 1710 aa12.21□□□□□ -0.45
MAP1LC3B-205ENST00000564638 ABCA10Q8WWZ4 1543 aa12.2□□□□□ -0.46
MAP1LC3B-205ENST00000564638 PBRM1Q86U86 1689 aa12.18□□□□□ -0.46
MAP1LC3B-205ENST00000564638 SENP3Q9H4L4 574 aaPredicted RBP12.17□□□□□ -0.46
MAP1LC3B-205ENST00000564638 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
MAP1LC3B-205ENST00000564638 ABCA5Q8WWZ7 1642 aa12.16□□□□□ -0.46
MAP1LC3B-205ENST00000564638 GRIN2BQ13224 1484 aa12.14□□□□□ -0.47
MAP1LC3B-205ENST00000564638 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
MAP1LC3B-205ENST00000564638 FBLN2P98095 1184 aa12.13□□□□□ -0.47
MAP1LC3B-205ENST00000564638 CLASP1Q7Z460 1538 aa12.11□□□□□ -0.47
MAP1LC3B-205ENST00000564638 MAGI1Q96QZ7 1491 aaPredicted RBP12.09□□□□□ -0.47
MAP1LC3B-205ENST00000564638 KIF27Q86VH2 1401 aa12.08□□□□□ -0.48
MAP1LC3B-205ENST00000564638 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
MAP1LC3B-205ENST00000564638 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
MAP1LC3B-205ENST00000564638 ADAMTS12P58397 1594 aa12.05□□□□□ -0.48
MAP1LC3B-205ENST00000564638 SYNJ2O15056 1496 aa12.05□□□□□ -0.48
MAP1LC3B-205ENST00000564638 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.49
MAP1LC3B-205ENST00000564638 FHAD1B1AJZ9 1412 aa12.02□□□□□ -0.49
MAP1LC3B-205ENST00000564638 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
MAP1LC3B-205ENST00000564638 CUL7Q14999 1698 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms