RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 MED14O60244 1454 aa17.4■□□□□ 0.38
FANCA-209ENST00000562424 HFM1A2PYH4 1435 aa17.39■□□□□ 0.38
FANCA-209ENST00000562424 SLIT1O75093 1534 aa17.39■□□□□ 0.37
FANCA-209ENST00000562424 IDI1Q13907 227 aa17.39■□□□□ 0.37
FANCA-209ENST00000562424 ARHGAP23Q9P227 1491 aa17.38■□□□□ 0.37
FANCA-209ENST00000562424 IQGAP1P46940 1657 aa17.38■□□□□ 0.37
FANCA-209ENST00000562424 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
FANCA-209ENST00000562424 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
FANCA-209ENST00000562424 ADGRB3O60242 1522 aa17.37■□□□□ 0.37
FANCA-209ENST00000562424 SCAF11Q99590 1463 aaKnown RBP17.36■□□□□ 0.37
FANCA-209ENST00000562424 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
FANCA-209ENST00000562424 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
FANCA-209ENST00000562424 TMEM2Q9UHN6 1383 aa17.34■□□□□ 0.37
FANCA-209ENST00000562424 LTKP29376 864 aa17.32■□□□□ 0.36
FANCA-209ENST00000562424 SPHKAPQ2M3C7 1700 aa17.32■□□□□ 0.36
FANCA-209ENST00000562424 TMEM131LA2VDJ0 1609 aa17.32■□□□□ 0.36
FANCA-209ENST00000562424 TOM1O60784 492 aa17.31■□□□□ 0.36
FANCA-209ENST00000562424 TXNDC2Q86VQ3 553 aa17.31■□□□□ 0.36
FANCA-209ENST00000562424 EID1Q9Y6B2 187 aa17.31■□□□□ 0.36
FANCA-209ENST00000562424 HSPA1LP34931 641 aa17.3■□□□□ 0.36
FANCA-209ENST00000562424 CPS1P31327 1500 aa17.29■□□□□ 0.36
FANCA-209ENST00000562424 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
FANCA-209ENST00000562424 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
FANCA-209ENST00000562424 STRCP1A6NGW2 1772 aa17.26■□□□□ 0.35
FANCA-209ENST00000562424 ZFYVE9O95405 1425 aa17.25■□□□□ 0.35
FANCA-209ENST00000562424 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
FANCA-209ENST00000562424 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
FANCA-209ENST00000562424 TRPM2O94759 1503 aa17.23■□□□□ 0.35
FANCA-209ENST00000562424 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
FANCA-209ENST00000562424 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
FANCA-209ENST00000562424 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
FANCA-209ENST00000562424 KIF1BO60333 1816 aa17.2■□□□□ 0.34
FANCA-209ENST00000562424 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
FANCA-209ENST00000562424 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
FANCA-209ENST00000562424 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
FANCA-209ENST00000562424 PLEKHG1Q9ULL1 1385 aa17.18■□□□□ 0.34
FANCA-209ENST00000562424 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
FANCA-209ENST00000562424 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
FANCA-209ENST00000562424 MED1Q15648 1581 aaPredicted RBP17.17■□□□□ 0.34
FANCA-209ENST00000562424 ALKQ9UM73 1620 aa17.17■□□□□ 0.34
FANCA-209ENST00000562424 ACIN1Q9UKV3 1341 aaKnown RBP17.17■□□□□ 0.34
FANCA-209ENST00000562424 LRRC7Q96NW7 1537 aa17.16■□□□□ 0.34
FANCA-209ENST00000562424 SLC26A8Q96RN1 970 aa17.16■□□□□ 0.34
FANCA-209ENST00000562424 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.34
FANCA-209ENST00000562424 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.33
FANCA-209ENST00000562424 BCANQ96GW7 911 aa17.13■□□□□ 0.33
FANCA-209ENST00000562424 MPHOSPH9Q99550 1183 aa17.13■□□□□ 0.33
FANCA-209ENST00000562424 NWD1Q149M9 1564 aa17.13■□□□□ 0.33
FANCA-209ENST00000562424 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
FANCA-209ENST00000562424 DIP2AQ14689 1571 aa17.12■□□□□ 0.33
FANCA-209ENST00000562424 KCNA6P17658 529 aa17.12■□□□□ 0.33
FANCA-209ENST00000562424 NUTM2DQ5VT03 806 aaPredicted RBP17.12■□□□□ 0.33
FANCA-209ENST00000562424 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
FANCA-209ENST00000562424 ADAMTS13Q76LX8 1427 aa17.11■□□□□ 0.33
FANCA-209ENST00000562424 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
FANCA-209ENST00000562424 TBX22Q9Y458 520 aa17.1■□□□□ 0.33
FANCA-209ENST00000562424 NKTRP30414 1462 aaKnown RBP17.09■□□□□ 0.33
FANCA-209ENST00000562424 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
FANCA-209ENST00000562424 NRXN3Q9Y4C0 1643 aa17.09■□□□□ 0.33
FANCA-209ENST00000562424 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
FANCA-209ENST00000562424 PIK3R4Q99570 1358 aa17.06■□□□□ 0.32
FANCA-209ENST00000562424 PPLO60437 1756 aa17.06■□□□□ 0.32
FANCA-209ENST00000562424 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
FANCA-209ENST00000562424 HRCP23327 699 aa17.04■□□□□ 0.32
FANCA-209ENST00000562424 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
FANCA-209ENST00000562424 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
FANCA-209ENST00000562424 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
FANCA-209ENST00000562424 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
FANCA-209ENST00000562424 VGFO15240 615 aaPredicted RBP17.01■□□□□ 0.31
FANCA-209ENST00000562424 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
FANCA-209ENST00000562424 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
FANCA-209ENST00000562424 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
FANCA-209ENST00000562424 XRN1Q8IZH2 1706 aaKnown RBP17■□□□□ 0.31
FANCA-209ENST00000562424 PTPRUQ92729 1446 aa17■□□□□ 0.31
FANCA-209ENST00000562424 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
FANCA-209ENST00000562424 RBM33Q96EV2 1170 aaKnown RBP16.99■□□□□ 0.31
FANCA-209ENST00000562424 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
FANCA-209ENST00000562424 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
FANCA-209ENST00000562424 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
FANCA-209ENST00000562424 METP08581 1390 aa16.97■□□□□ 0.31
FANCA-209ENST00000562424 MSH6P52701 1360 aa16.96■□□□□ 0.31
FANCA-209ENST00000562424 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
FANCA-209ENST00000562424 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
FANCA-209ENST00000562424 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
FANCA-209ENST00000562424 ADGRF5Q8IZF2 1346 aa16.92■□□□□ 0.3
FANCA-209ENST00000562424 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
FANCA-209ENST00000562424 C14orf37Q86TY3 774 aa16.89■□□□□ 0.29
FANCA-209ENST00000562424 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
FANCA-209ENST00000562424 PIK3C2GO75747 1445 aa16.88■□□□□ 0.29
FANCA-209ENST00000562424 PRAG1Q86YV5 1406 aa16.88■□□□□ 0.29
FANCA-209ENST00000562424 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
FANCA-209ENST00000562424 PTCH1Q13635 1447 aa16.87■□□□□ 0.29
FANCA-209ENST00000562424 MYOM2P54296 1465 aa16.87■□□□□ 0.29
FANCA-209ENST00000562424 SLAIN2Q9P270 581 aa16.87■□□□□ 0.29
FANCA-209ENST00000562424 DCCP43146 1447 aa16.87■□□□□ 0.29
FANCA-209ENST00000562424 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
FANCA-209ENST00000562424 CADPS2Q86UW7 1296 aa16.86■□□□□ 0.29
FANCA-209ENST00000562424 NALCNQ8IZF0 1738 aa16.86■□□□□ 0.29
FANCA-209ENST00000562424 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
FANCA-209ENST00000562424 ATF3P18847 181 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms