RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 E2F4Q16254 413 aa12.95□□□□□ -0.34
AC009090.1-201ENST00000562409 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
AC009090.1-201ENST00000562409 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
AC009090.1-201ENST00000562409 CDK13Q14004 1512 aaKnown RBP12.91□□□□□ -0.34
AC009090.1-201ENST00000562409 AKNAQ7Z591 1439 aa12.9□□□□□ -0.34
AC009090.1-201ENST00000562409 EFCAB2Q5VUJ9 269 aa12.89□□□□□ -0.35
AC009090.1-201ENST00000562409 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
AC009090.1-201ENST00000562409 FANCAO15360 1455 aa12.89□□□□□ -0.35
AC009090.1-201ENST00000562409 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
AC009090.1-201ENST00000562409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.88□□□□□ -0.35
AC009090.1-201ENST00000562409 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
AC009090.1-201ENST00000562409 KCNV2Q8TDN2 545 aa12.88□□□□□ -0.35
AC009090.1-201ENST00000562409 CAMK2BQ13554 666 aa12.87□□□□□ -0.35
AC009090.1-201ENST00000562409 HECW1Q76N89 1606 aa12.87□□□□□ -0.35
AC009090.1-201ENST00000562409 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
AC009090.1-201ENST00000562409 PLCH2O75038 1416 aa12.86□□□□□ -0.35
AC009090.1-201ENST00000562409 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
AC009090.1-201ENST00000562409 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
AC009090.1-201ENST00000562409 HOXB1P14653 301 aaPredicted RBP12.84□□□□□ -0.35
AC009090.1-201ENST00000562409 CLIP1P30622 1438 aa12.84□□□□□ -0.35
AC009090.1-201ENST00000562409 SCAPERQ9BY12 1400 aa12.84□□□□□ -0.35
AC009090.1-201ENST00000562409 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
AC009090.1-201ENST00000562409 CFAP74Q9C0B2 1584 aa12.83□□□□□ -0.36
AC009090.1-201ENST00000562409 TROQ12816 1431 aaPredicted RBP12.83□□□□□ -0.36
AC009090.1-201ENST00000562409 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
AC009090.1-201ENST00000562409 ERBB3P21860 1342 aa12.83□□□□□ -0.36
AC009090.1-201ENST00000562409 SLC34A2O95436 690 aa12.82□□□□□ -0.36
AC009090.1-201ENST00000562409 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
AC009090.1-201ENST00000562409 MYT1LQ9UL68 1186 aa12.82□□□□□ -0.36
AC009090.1-201ENST00000562409 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
AC009090.1-201ENST00000562409 DPYSL4O14531 572 aa12.81□□□□□ -0.36
AC009090.1-201ENST00000562409 TBC1D12O60347 775 aa12.8□□□□□ -0.36
AC009090.1-201ENST00000562409 OXER1Q8TDS5 423 aa12.8□□□□□ -0.36
AC009090.1-201ENST00000562409 PTCD2Q8WV60 388 aaKnown RBP12.8□□□□□ -0.36
AC009090.1-201ENST00000562409 FRMPD1Q5SYB0 1578 aa12.8□□□□□ -0.36
AC009090.1-201ENST00000562409 MLECQ14165 292 aa12.79□□□□□ -0.36
AC009090.1-201ENST00000562409 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
AC009090.1-201ENST00000562409 POGZQ7Z3K3 1410 aa12.79□□□□□ -0.36
AC009090.1-201ENST00000562409 PCDHGA4Q9Y5G9 962 aa12.78□□□□□ -0.36
AC009090.1-201ENST00000562409 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
AC009090.1-201ENST00000562409 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
AC009090.1-201ENST00000562409 KIF14Q15058 1648 aa12.77□□□□□ -0.36
AC009090.1-201ENST00000562409 RICTORQ6R327 1708 aa12.77□□□□□ -0.36
AC009090.1-201ENST00000562409 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
AC009090.1-201ENST00000562409 AFAP1Q8N556 730 aa12.77□□□□□ -0.37
AC009090.1-201ENST00000562409 PTPRMP28827 1452 aa12.77□□□□□ -0.37
AC009090.1-201ENST00000562409 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.37
AC009090.1-201ENST00000562409 ARSIQ5FYB1 569 aa12.76□□□□□ -0.37
AC009090.1-201ENST00000562409 YEATS2Q9ULM3 1422 aa12.76□□□□□ -0.37
AC009090.1-201ENST00000562409 ZFYVE16Q7Z3T8 1539 aa12.76□□□□□ -0.37
AC009090.1-201ENST00000562409 HECW2Q9P2P5 1572 aa12.76□□□□□ -0.37
AC009090.1-201ENST00000562409 ADAMTSL3P82987 1691 aa12.75□□□□□ -0.37
AC009090.1-201ENST00000562409 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
AC009090.1-201ENST00000562409 MYO5CQ9NQX4 1742 aa12.75□□□□□ -0.37
AC009090.1-201ENST00000562409 ZNF777Q9ULD5 760 aaPredicted RBP12.75□□□□□ -0.37
AC009090.1-201ENST00000562409 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
AC009090.1-201ENST00000562409 ZMYM4Q5VZL5 1548 aa12.74□□□□□ -0.37
AC009090.1-201ENST00000562409 ARHGEF40Q8TER5 1519 aa12.74□□□□□ -0.37
AC009090.1-201ENST00000562409 KHSRPQ92945 711 aaKnown RBP eCLIP12.74□□□□□ -0.37
AC009090.1-201ENST00000562409 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
AC009090.1-201ENST00000562409 ATP10AO60312 1499 aa12.73□□□□□ -0.37
AC009090.1-201ENST00000562409 FYCO1Q9BQS8 1478 aa12.73□□□□□ -0.37
AC009090.1-201ENST00000562409 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
AC009090.1-201ENST00000562409 LRRIQ1Q96JM4 1722 aa12.72□□□□□ -0.37
AC009090.1-201ENST00000562409 ZNF518AQ6AHZ1 1483 aa12.72□□□□□ -0.37
AC009090.1-201ENST00000562409 ZNF316A6NFI3 1004 aaPredicted RBP12.71□□□□□ -0.37
AC009090.1-201ENST00000562409 EVI5O60447 810 aa12.71□□□□□ -0.37
AC009090.1-201ENST00000562409 NUDT7P0C024 238 aa12.71□□□□□ -0.37
AC009090.1-201ENST00000562409 NBR1Q14596 966 aa12.71□□□□□ -0.37
AC009090.1-201ENST00000562409 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
AC009090.1-201ENST00000562409 MADDQ8WXG6 1647 aa12.7□□□□□ -0.38
AC009090.1-201ENST00000562409 C9orf84Q5VXU9 1444 aa12.7□□□□□ -0.38
AC009090.1-201ENST00000562409 SPDYE16A6NNV3 312 aaPredicted RBP12.69□□□□□ -0.38
AC009090.1-201ENST00000562409 CFDP1Q9UEE9 299 aaPredicted RBP12.69□□□□□ -0.38
AC009090.1-201ENST00000562409 MTUS2Q5JR59 1369 aa12.69□□□□□ -0.38
AC009090.1-201ENST00000562409 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
AC009090.1-201ENST00000562409 LOC105371045A0A1W2PR82 267 aa12.67□□□□□ -0.38
AC009090.1-201ENST00000562409 HNRNPMP52272 730 aaKnown RBP eCLIP12.67□□□□□ -0.38
AC009090.1-201ENST00000562409 PDIA6Q15084 440 aa12.67□□□□□ -0.38
AC009090.1-201ENST00000562409 CCNB3Q8WWL7 1395 aa12.67□□□□□ -0.38
AC009090.1-201ENST00000562409 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
AC009090.1-201ENST00000562409 CDC42BPBQ9Y5S2 1711 aa12.66□□□□□ -0.38
AC009090.1-201ENST00000562409 TRAPPC8Q9Y2L5 1435 aa12.66□□□□□ -0.38
AC009090.1-201ENST00000562409 CEP162Q5TB80 1403 aa12.65□□□□□ -0.38
AC009090.1-201ENST00000562409 GPATCH8Q9UKJ3 1502 aaKnown RBP12.65□□□□□ -0.38
AC009090.1-201ENST00000562409 PREX2Q70Z35 1606 aa12.65□□□□□ -0.38
AC009090.1-201ENST00000562409 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
AC009090.1-201ENST00000562409 SPAG9O60271 1321 aaKnown RBP12.64□□□□□ -0.39
AC009090.1-201ENST00000562409 ARHGEF12Q9NZN5 1544 aa12.64□□□□□ -0.39
AC009090.1-201ENST00000562409 CEBPAP49715 358 aaPredicted RBP12.64□□□□□ -0.39
AC009090.1-201ENST00000562409 HSPA2P54652 639 aa12.64□□□□□ -0.39
AC009090.1-201ENST00000562409 KDM5CP41229 1560 aa12.64□□□□□ -0.39
AC009090.1-201ENST00000562409 SEMA3EO15041 775 aa12.63□□□□□ -0.39
AC009090.1-201ENST00000562409 BCANQ96GW7 911 aa12.63□□□□□ -0.39
AC009090.1-201ENST00000562409 ABCC1P33527 1531 aa12.62□□□□□ -0.39
AC009090.1-201ENST00000562409 SIGLEC1Q9BZZ2 1709 aa12.62□□□□□ -0.39
AC009090.1-201ENST00000562409 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
AC009090.1-201ENST00000562409 CDC42BPAQ5VT25 1732 aa12.61□□□□□ -0.39
AC009090.1-201ENST00000562409 PLEKHH2Q8IVE3 1493 aa12.6□□□□□ -0.39
AC009090.1-201ENST00000562409 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms