RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CCER1Q8TC90 406 aaPredicted RBP14.97□□□□□ -0.01
LRRC28-221ENST00000561276 STRCQ7RTU9 1775 aa14.96□□□□□ -0.02
LRRC28-221ENST00000561276 ANKLE2Q86XL3 938 aa14.95□□□□□ -0.02
LRRC28-221ENST00000561276 TMEM2Q9UHN6 1383 aa14.95□□□□□ -0.02
LRRC28-221ENST00000561276 SLIT1O75093 1534 aa14.94□□□□□ -0.02
LRRC28-221ENST00000561276 LTKP29376 864 aa14.94□□□□□ -0.02
LRRC28-221ENST00000561276 HDGFP51858 240 aaKnown RBP14.94□□□□□ -0.02
LRRC28-221ENST00000561276 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
LRRC28-221ENST00000561276 NCKAP5LQ9HCH0 1330 aa14.93□□□□□ -0.02
LRRC28-221ENST00000561276 SPATA31E1Q6ZUB1 1445 aa14.93□□□□□ -0.02
LRRC28-221ENST00000561276 POLR1AO95602 1720 aaPredicted RBP14.93□□□□□ -0.02
LRRC28-221ENST00000561276 EID1Q9Y6B2 187 aa14.93□□□□□ -0.02
LRRC28-221ENST00000561276 ARHGAP23Q9P227 1491 aa14.93□□□□□ -0.02
LRRC28-221ENST00000561276 NUTM2DQ5VT03 806 aaPredicted RBP14.92□□□□□ -0.02
LRRC28-221ENST00000561276 NEURL4Q96JN8 1562 aa14.92□□□□□ -0.02
LRRC28-221ENST00000561276 PPLO60437 1756 aa14.92□□□□□ -0.02
LRRC28-221ENST00000561276 RIMS2Q9UQ26 1411 aa14.92□□□□□ -0.02
LRRC28-221ENST00000561276 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
LRRC28-221ENST00000561276 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
LRRC28-221ENST00000561276 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.91□□□□□ -0.02
LRRC28-221ENST00000561276 IFT172Q9UG01 1749 aa14.91□□□□□ -0.02
LRRC28-221ENST00000561276 ZFYVE9O95405 1425 aa14.91□□□□□ -0.02
LRRC28-221ENST00000561276 NEXMIFQ5QGS0 1516 aa14.89□□□□□ -0.03
LRRC28-221ENST00000561276 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
LRRC28-221ENST00000561276 PPP1R15AO75807 674 aaPredicted RBP14.89□□□□□ -0.03
LRRC28-221ENST00000561276 DCAF11Q8TEB1 546 aa14.89□□□□□ -0.03
LRRC28-221ENST00000561276 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
LRRC28-221ENST00000561276 SCAF11Q99590 1463 aaKnown RBP14.88□□□□□ -0.03
LRRC28-221ENST00000561276 L3MBTL2Q969R5 705 aa14.86□□□□□ -0.03
LRRC28-221ENST00000561276 BCANQ96GW7 911 aa14.86□□□□□ -0.03
LRRC28-221ENST00000561276 MED14O60244 1454 aa14.86□□□□□ -0.03
LRRC28-221ENST00000561276 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
LRRC28-221ENST00000561276 STAC3Q96MF2 364 aa14.84□□□□□ -0.03
LRRC28-221ENST00000561276 ADGRF5Q8IZF2 1346 aa14.84□□□□□ -0.03
LRRC28-221ENST00000561276 NPHP4O75161 1426 aaPredicted RBP14.83□□□□□ -0.03
LRRC28-221ENST00000561276 HOXD11P31277 338 aaPredicted RBP14.83□□□□□ -0.04
LRRC28-221ENST00000561276 TONSLQ96HA7 1378 aa14.83□□□□□ -0.04
LRRC28-221ENST00000561276 PLEKHG1Q9ULL1 1385 aa14.83□□□□□ -0.04
LRRC28-221ENST00000561276 SLC26A8Q96RN1 970 aa14.82□□□□□ -0.04
LRRC28-221ENST00000561276 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
LRRC28-221ENST00000561276 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
LRRC28-221ENST00000561276 MYOM2P54296 1465 aa14.79□□□□□ -0.04
LRRC28-221ENST00000561276 TIMELESSQ9UNS1 1208 aa14.79□□□□□ -0.04
LRRC28-221ENST00000561276 TBX22Q9Y458 520 aa14.79□□□□□ -0.04
LRRC28-221ENST00000561276 NRXN3Q9Y4C0 1643 aa14.79□□□□□ -0.04
LRRC28-221ENST00000561276 SETBP1Q9Y6X0 1596 aa14.78□□□□□ -0.04
LRRC28-221ENST00000561276 NRXN1Q9ULB1 1477 aa14.77□□□□□ -0.04
LRRC28-221ENST00000561276 ADAMTS13Q76LX8 1427 aa14.77□□□□□ -0.04
LRRC28-221ENST00000561276 ALKQ9UM73 1620 aa14.77□□□□□ -0.05
LRRC28-221ENST00000561276 PIK3C2GO75747 1445 aa14.76□□□□□ -0.05
LRRC28-221ENST00000561276 C14orf93Q9H972 538 aaKnown RBP14.76□□□□□ -0.05
LRRC28-221ENST00000561276 CHD2O14647 1828 aaKnown RBP14.76□□□□□ -0.05
LRRC28-221ENST00000561276 SETD1AO15047 1707 aaKnown RBP14.75□□□□□ -0.05
LRRC28-221ENST00000561276 CFAP70Q5T0N1 1121 aa14.75□□□□□ -0.05
LRRC28-221ENST00000561276 DIP2AQ14689 1571 aa14.74□□□□□ -0.05
LRRC28-221ENST00000561276 NBPF8Q3BBV2 869 aa14.73□□□□□ -0.05
LRRC28-221ENST00000561276 TMEM132EQ6IEE7 984 aa14.73□□□□□ -0.05
LRRC28-221ENST00000561276 PRAG1Q86YV5 1406 aa14.73□□□□□ -0.05
LRRC28-221ENST00000561276 LAMC1P11047 1609 aa14.73□□□□□ -0.05
LRRC28-221ENST00000561276 METP08581 1390 aa14.73□□□□□ -0.05
LRRC28-221ENST00000561276 STRCP1A6NGW2 1772 aa14.72□□□□□ -0.05
LRRC28-221ENST00000561276 KIAA1210Q9ULL0 1709 aa14.72□□□□□ -0.05
LRRC28-221ENST00000561276 TRPM1Q7Z4N2 1603 aa14.7□□□□□ -0.06
LRRC28-221ENST00000561276 ZNF335Q9H4Z2 1342 aaPredicted RBP14.7□□□□□ -0.06
LRRC28-221ENST00000561276 KCNA6P17658 529 aa14.7□□□□□ -0.06
LRRC28-221ENST00000561276 KCNA4P22459 653 aa14.7□□□□□ -0.06
LRRC28-221ENST00000561276 NBPF1Q3BBV0 1214 aa14.7□□□□□ -0.06
LRRC28-221ENST00000561276 AMOTL2Q9Y2J4 779 aa14.7□□□□□ -0.06
LRRC28-221ENST00000561276 PIK3R4Q99570 1358 aa14.7□□□□□ -0.06
LRRC28-221ENST00000561276 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
LRRC28-221ENST00000561276 PTPRUQ92729 1446 aa14.68□□□□□ -0.06
LRRC28-221ENST00000561276 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
LRRC28-221ENST00000561276 STK26Q9P289 416 aa14.67□□□□□ -0.06
LRRC28-221ENST00000561276 ASXL1Q8IXJ9 1541 aa14.66□□□□□ -0.06
LRRC28-221ENST00000561276 ADGRB1O14514 1584 aa14.65□□□□□ -0.06
LRRC28-221ENST00000561276 PROSER2Q86WR7 435 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-221ENST00000561276 XRN1Q8IZH2 1706 aaKnown RBP14.65□□□□□ -0.06
LRRC28-221ENST00000561276 LTBP4Q8N2S1 1624 aa14.65□□□□□ -0.06
LRRC28-221ENST00000561276 YTHDC2Q9H6S0 1430 aaKnown RBP14.65□□□□□ -0.06
LRRC28-221ENST00000561276 NWD1Q149M9 1564 aa14.64□□□□□ -0.07
LRRC28-221ENST00000561276 ROCK2O75116 1388 aaKnown RBP14.63□□□□□ -0.07
LRRC28-221ENST00000561276 LRPPRCP42704 1394 aaKnown RBP14.63□□□□□ -0.07
LRRC28-221ENST00000561276 TRAK1Q9UPV9 953 aa14.63□□□□□ -0.07
LRRC28-221ENST00000561276 ABCC11Q96J66 1382 aa14.62□□□□□ -0.07
LRRC28-221ENST00000561276 XIRP1Q702N8 1843 aaKnown RBP14.62□□□□□ -0.07
LRRC28-221ENST00000561276 KNDC1Q76NI1 1749 aa14.62□□□□□ -0.07
LRRC28-221ENST00000561276 RBM33Q96EV2 1170 aaKnown RBP14.62□□□□□ -0.07
LRRC28-221ENST00000561276 CPS1P31327 1500 aa14.61□□□□□ -0.07
LRRC28-221ENST00000561276 NKTRP30414 1462 aaKnown RBP14.61□□□□□ -0.07
LRRC28-221ENST00000561276 WAPLQ7Z5K2 1190 aa14.6□□□□□ -0.07
LRRC28-221ENST00000561276 SIRT1Q96EB6 747 aa14.6□□□□□ -0.07
LRRC28-221ENST00000561276 CARD11Q9BXL7 1154 aa14.6□□□□□ -0.07
LRRC28-221ENST00000561276 RALGAPBQ86X10 1494 aa14.6□□□□□ -0.07
LRRC28-221ENST00000561276 LRRC7Q96NW7 1537 aa14.6□□□□□ -0.07
LRRC28-221ENST00000561276 ROBO2Q9HCK4 1378 aa14.6□□□□□ -0.07
LRRC28-221ENST00000561276 ARHGEF28Q8N1W1 1705 aaKnown RBP14.59□□□□□ -0.07
LRRC28-221ENST00000561276 TECPR2O15040 1411 aa14.58□□□□□ -0.07
LRRC28-221ENST00000561276 POGKQ9P215 609 aa14.58□□□□□ -0.08
LRRC28-221ENST00000561276 GPRASP1Q5JY77 1395 aa14.58□□□□□ -0.08
LRRC28-221ENST00000561276 CERKQ8TCT0 537 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms