RNA–Protein interactions for RNA: ENST00000560503.2

AC009654.1-201, humanhuman

TSL 3 BASIC

Gene AC009654.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009654.1-201ENST00000560503 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
AC009654.1-201ENST00000560503 MED14O60244 1454 aa17.92■□□□□ 0.46
AC009654.1-201ENST00000560503 NPHP4O75161 1426 aaPredicted RBP17.91■□□□□ 0.46
AC009654.1-201ENST00000560503 RNF216Q9NWF9 866 aaPredicted RBP17.9■□□□□ 0.46
AC009654.1-201ENST00000560503 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
AC009654.1-201ENST00000560503 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
AC009654.1-201ENST00000560503 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
AC009654.1-201ENST00000560503 HRCP23327 699 aa17.87■□□□□ 0.45
AC009654.1-201ENST00000560503 TXNDC2Q86VQ3 553 aa17.87■□□□□ 0.45
AC009654.1-201ENST00000560503 MPHOSPH9Q99550 1183 aa17.86■□□□□ 0.45
AC009654.1-201ENST00000560503 PPP1R15AO75807 674 aaPredicted RBP17.85■□□□□ 0.45
AC009654.1-201ENST00000560503 CCDC144AA2RUR9 1427 aa17.84■□□□□ 0.45
AC009654.1-201ENST00000560503 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
AC009654.1-201ENST00000560503 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.84■□□□□ 0.45
AC009654.1-201ENST00000560503 ZFYVE9O95405 1425 aa17.82■□□□□ 0.44
AC009654.1-201ENST00000560503 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
AC009654.1-201ENST00000560503 LTKP29376 864 aa17.81■□□□□ 0.44
AC009654.1-201ENST00000560503 ZNF326Q5BKZ1 582 aaKnown RBP17.8■□□□□ 0.44
AC009654.1-201ENST00000560503 CPS1P31327 1500 aa17.8■□□□□ 0.44
AC009654.1-201ENST00000560503 BCANQ96GW7 911 aa17.79■□□□□ 0.44
AC009654.1-201ENST00000560503 LTBP4Q8N2S1 1624 aa17.79■□□□□ 0.44
AC009654.1-201ENST00000560503 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
AC009654.1-201ENST00000560503 IQSEC2Q5JU85 1478 aa17.78■□□□□ 0.44
AC009654.1-201ENST00000560503 TRIM26Q12899 539 aaPredicted RBP17.78■□□□□ 0.44
AC009654.1-201ENST00000560503 DIP2AQ14689 1571 aa17.78■□□□□ 0.44
AC009654.1-201ENST00000560503 ZNF335Q9H4Z2 1342 aaPredicted RBP17.77■□□□□ 0.44
AC009654.1-201ENST00000560503 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
AC009654.1-201ENST00000560503 NEXMIFQ5QGS0 1516 aa17.75■□□□□ 0.43
AC009654.1-201ENST00000560503 PPLO60437 1756 aa17.75■□□□□ 0.43
AC009654.1-201ENST00000560503 RPGRIP1LQ68CZ1 1315 aa17.73■□□□□ 0.43
AC009654.1-201ENST00000560503 SETBP1Q9Y6X0 1596 aa17.71■□□□□ 0.43
AC009654.1-201ENST00000560503 STRCP1A6NGW2 1772 aa17.7■□□□□ 0.42
AC009654.1-201ENST00000560503 NWD1Q149M9 1564 aa17.7■□□□□ 0.42
AC009654.1-201ENST00000560503 IFT172Q9UG01 1749 aa17.69■□□□□ 0.42
AC009654.1-201ENST00000560503 VGFO15240 615 aaPredicted RBP17.69■□□□□ 0.42
AC009654.1-201ENST00000560503 NUTM2DQ5VT03 806 aaPredicted RBP17.69■□□□□ 0.42
AC009654.1-201ENST00000560503 CHD2O14647 1828 aaKnown RBP17.69■□□□□ 0.42
AC009654.1-201ENST00000560503 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
AC009654.1-201ENST00000560503 SPATA31E1Q6ZUB1 1445 aa17.68■□□□□ 0.42
AC009654.1-201ENST00000560503 FBXO41Q8TF61 875 aa17.68■□□□□ 0.42
AC009654.1-201ENST00000560503 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
AC009654.1-201ENST00000560503 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
AC009654.1-201ENST00000560503 ANKRD30BQ9BXX2 1392 aa17.67■□□□□ 0.42
AC009654.1-201ENST00000560503 NRXN3Q9Y4C0 1643 aa17.66■□□□□ 0.42
AC009654.1-201ENST00000560503 TBX22Q9Y458 520 aa17.66■□□□□ 0.42
AC009654.1-201ENST00000560503 ADAMTS13Q76LX8 1427 aa17.65■□□□□ 0.42
AC009654.1-201ENST00000560503 KCNA6P17658 529 aa17.64■□□□□ 0.41
AC009654.1-201ENST00000560503 LRRC7Q96NW7 1537 aa17.63■□□□□ 0.41
AC009654.1-201ENST00000560503 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
AC009654.1-201ENST00000560503 MYOM2P54296 1465 aa17.6■□□□□ 0.41
AC009654.1-201ENST00000560503 LAMC1P11047 1609 aa17.6■□□□□ 0.41
AC009654.1-201ENST00000560503 XIRP1Q702N8 1843 aaKnown RBP17.59■□□□□ 0.41
AC009654.1-201ENST00000560503 SETD1AO15047 1707 aaKnown RBP17.59■□□□□ 0.41
AC009654.1-201ENST00000560503 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.41
AC009654.1-201ENST00000560503 ALKQ9UM73 1620 aa17.58■□□□□ 0.41
AC009654.1-201ENST00000560503 PROSER2Q86WR7 435 aaPredicted RBP17.57■□□□□ 0.4
AC009654.1-201ENST00000560503 UBAP1LF5GYI3 381 aa17.56■□□□□ 0.4
AC009654.1-201ENST00000560503 TOM1O60784 492 aa17.56■□□□□ 0.4
AC009654.1-201ENST00000560503 ILDR1Q86SU0 546 aaPredicted RBP17.56■□□□□ 0.4
AC009654.1-201ENST00000560503 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
AC009654.1-201ENST00000560503 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
AC009654.1-201ENST00000560503 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
AC009654.1-201ENST00000560503 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
AC009654.1-201ENST00000560503 MSH6P52701 1360 aa17.53■□□□□ 0.4
AC009654.1-201ENST00000560503 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
AC009654.1-201ENST00000560503 CACNB1Q02641 598 aaPredicted RBP17.53■□□□□ 0.4
AC009654.1-201ENST00000560503 AMOTL2Q9Y2J4 779 aa17.53■□□□□ 0.4
AC009654.1-201ENST00000560503 METP08581 1390 aa17.53■□□□□ 0.4
AC009654.1-201ENST00000560503 DHX57Q6P158 1386 aaKnown RBP17.53■□□□□ 0.4
AC009654.1-201ENST00000560503 NRXN1Q9ULB1 1477 aa17.52■□□□□ 0.4
AC009654.1-201ENST00000560503 PTCH1Q13635 1447 aa17.51■□□□□ 0.39
AC009654.1-201ENST00000560503 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
AC009654.1-201ENST00000560503 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
AC009654.1-201ENST00000560503 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
AC009654.1-201ENST00000560503 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
AC009654.1-201ENST00000560503 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
AC009654.1-201ENST00000560503 DCAF11Q8TEB1 546 aa17.49■□□□□ 0.39
AC009654.1-201ENST00000560503 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
AC009654.1-201ENST00000560503 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
AC009654.1-201ENST00000560503 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
AC009654.1-201ENST00000560503 DCCP43146 1447 aa17.46■□□□□ 0.39
AC009654.1-201ENST00000560503 KIAA1210Q9ULL0 1709 aa17.45■□□□□ 0.38
AC009654.1-201ENST00000560503 KDM2AQ9Y2K7 1162 aa17.45■□□□□ 0.38
AC009654.1-201ENST00000560503 LRPPRCP42704 1394 aaKnown RBP17.44■□□□□ 0.38
AC009654.1-201ENST00000560503 ASXL1Q8IXJ9 1541 aa17.44■□□□□ 0.38
AC009654.1-201ENST00000560503 PIP4K2BP78356 416 aa17.44■□□□□ 0.38
AC009654.1-201ENST00000560503 C14orf93Q9H972 538 aaKnown RBP17.44■□□□□ 0.38
AC009654.1-201ENST00000560503 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
AC009654.1-201ENST00000560503 CADPS2Q86UW7 1296 aa17.43■□□□□ 0.38
AC009654.1-201ENST00000560503 C19orf44Q9H6X5 657 aa17.43■□□□□ 0.38
AC009654.1-201ENST00000560503 TECPR2O15040 1411 aa17.43■□□□□ 0.38
AC009654.1-201ENST00000560503 YTHDC2Q9H6S0 1430 aaKnown RBP17.43■□□□□ 0.38
AC009654.1-201ENST00000560503 ADGRL3Q9HAR2 1447 aa17.43■□□□□ 0.38
AC009654.1-201ENST00000560503 ATF3P18847 181 aa17.42■□□□□ 0.38
AC009654.1-201ENST00000560503 RBM33Q96EV2 1170 aaKnown RBP17.42■□□□□ 0.38
AC009654.1-201ENST00000560503 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
AC009654.1-201ENST00000560503 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
AC009654.1-201ENST00000560503 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
AC009654.1-201ENST00000560503 ROBO2Q9HCK4 1378 aa17.4■□□□□ 0.38
AC009654.1-201ENST00000560503 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms