RNA–Protein interactions for RNA: ENST00000560503.2

AC009654.1-201, humanhuman

TSL 3 BASIC

Gene AC009654.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009654.1-201ENST00000560503 NISCHQ9Y2I1 1504 aa29.18■■■□□ 2.26
AC009654.1-201ENST00000560503 AEBP2Q6ZN18 517 aaPredicted RBP27.52■■■□□ 2
AC009654.1-201ENST00000560503 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
AC009654.1-201ENST00000560503 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
AC009654.1-201ENST00000560503 ABCC9O60706 1549 aa25.3■■□□□ 1.64
AC009654.1-201ENST00000560503 RB1CC1Q8TDY2 1594 aa24.47■■□□□ 1.51
AC009654.1-201ENST00000560503 NACADO15069 1562 aa24.44■■□□□ 1.5
AC009654.1-201ENST00000560503 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
AC009654.1-201ENST00000560503 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
AC009654.1-201ENST00000560503 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
AC009654.1-201ENST00000560503 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.46
AC009654.1-201ENST00000560503 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
AC009654.1-201ENST00000560503 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
AC009654.1-201ENST00000560503 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
AC009654.1-201ENST00000560503 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
AC009654.1-201ENST00000560503 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
AC009654.1-201ENST00000560503 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
AC009654.1-201ENST00000560503 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
AC009654.1-201ENST00000560503 EIF4G1Q04637 1599 aaKnown RBP23.04■■□□□ 1.28
AC009654.1-201ENST00000560503 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
AC009654.1-201ENST00000560503 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
AC009654.1-201ENST00000560503 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
AC009654.1-201ENST00000560503 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
AC009654.1-201ENST00000560503 SMARCA4P51532 1647 aa22.68■■□□□ 1.22
AC009654.1-201ENST00000560503 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
AC009654.1-201ENST00000560503 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
AC009654.1-201ENST00000560503 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
AC009654.1-201ENST00000560503 HMGXB3Q12766 1538 aa22.45■■□□□ 1.18
AC009654.1-201ENST00000560503 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
AC009654.1-201ENST00000560503 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
AC009654.1-201ENST00000560503 BAZ1BQ9UIG0 1483 aaKnown RBP22.37■■□□□ 1.17
AC009654.1-201ENST00000560503 WIZO95785 1651 aa22.24■■□□□ 1.15
AC009654.1-201ENST00000560503 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
AC009654.1-201ENST00000560503 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
AC009654.1-201ENST00000560503 LAMC3Q9Y6N6 1575 aa21.96■■□□□ 1.11
AC009654.1-201ENST00000560503 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
AC009654.1-201ENST00000560503 FOXD1Q16676 465 aa21.88■■□□□ 1.09
AC009654.1-201ENST00000560503 NESP48681 1621 aa21.87■■□□□ 1.09
AC009654.1-201ENST00000560503 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
AC009654.1-201ENST00000560503 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
AC009654.1-201ENST00000560503 KIF21AQ7Z4S6 1674 aa21.73■■□□□ 1.07
AC009654.1-201ENST00000560503 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
AC009654.1-201ENST00000560503 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
AC009654.1-201ENST00000560503 CFTRP13569 1480 aa21.71■■□□□ 1.07
AC009654.1-201ENST00000560503 CUX2O14529 1486 aa21.65■■□□□ 1.06
AC009654.1-201ENST00000560503 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
AC009654.1-201ENST00000560503 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
AC009654.1-201ENST00000560503 CEP164Q9UPV0 1460 aa21.61■■□□□ 1.05
AC009654.1-201ENST00000560503 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
AC009654.1-201ENST00000560503 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
AC009654.1-201ENST00000560503 WDR62O43379 1518 aa21.48■■□□□ 1.03
AC009654.1-201ENST00000560503 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
AC009654.1-201ENST00000560503 URB2Q14146 1524 aaKnown RBP21.33■■□□□ 1
AC009654.1-201ENST00000560503 DNMBPQ6XZF7 1577 aa21.28■■□□□ 1
AC009654.1-201ENST00000560503 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
AC009654.1-201ENST00000560503 IFT140Q96RY7 1462 aa21.14■□□□□ 0.98
AC009654.1-201ENST00000560503 CUX1P39880 1505 aa21.08■□□□□ 0.96
AC009654.1-201ENST00000560503 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
AC009654.1-201ENST00000560503 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
AC009654.1-201ENST00000560503 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
AC009654.1-201ENST00000560503 TARBP1Q13395 1621 aaKnown RBP21.01■□□□□ 0.95
AC009654.1-201ENST00000560503 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
AC009654.1-201ENST00000560503 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
AC009654.1-201ENST00000560503 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
AC009654.1-201ENST00000560503 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
AC009654.1-201ENST00000560503 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
AC009654.1-201ENST00000560503 SOGA1O94964 1423 aa20.96■□□□□ 0.95
AC009654.1-201ENST00000560503 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
AC009654.1-201ENST00000560503 RAD54L2Q9Y4B4 1467 aa20.92■□□□□ 0.94
AC009654.1-201ENST00000560503 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
AC009654.1-201ENST00000560503 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
AC009654.1-201ENST00000560503 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.93
AC009654.1-201ENST00000560503 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
AC009654.1-201ENST00000560503 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
AC009654.1-201ENST00000560503 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
AC009654.1-201ENST00000560503 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
AC009654.1-201ENST00000560503 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
AC009654.1-201ENST00000560503 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
AC009654.1-201ENST00000560503 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
AC009654.1-201ENST00000560503 CHD1O14646 1710 aa20.73■□□□□ 0.91
AC009654.1-201ENST00000560503 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
AC009654.1-201ENST00000560503 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
AC009654.1-201ENST00000560503 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
AC009654.1-201ENST00000560503 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
AC009654.1-201ENST00000560503 FBLN2P98095 1184 aa20.61■□□□□ 0.89
AC009654.1-201ENST00000560503 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
AC009654.1-201ENST00000560503 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.89
AC009654.1-201ENST00000560503 KIF27Q86VH2 1401 aa20.58■□□□□ 0.88
AC009654.1-201ENST00000560503 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
AC009654.1-201ENST00000560503 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
AC009654.1-201ENST00000560503 CUL7Q14999 1698 aa20.51■□□□□ 0.87
AC009654.1-201ENST00000560503 TRIM41Q8WV44 630 aa20.5■□□□□ 0.87
AC009654.1-201ENST00000560503 PIAS4Q8N2W9 510 aaPredicted RBP20.49■□□□□ 0.87
AC009654.1-201ENST00000560503 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
AC009654.1-201ENST00000560503 MSH5O43196 834 aa20.48■□□□□ 0.87
AC009654.1-201ENST00000560503 ADRA2BP18089 450 aa20.48■□□□□ 0.87
AC009654.1-201ENST00000560503 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
AC009654.1-201ENST00000560503 RIMBP3CA6NJZ7 1639 aa20.39■□□□□ 0.86
AC009654.1-201ENST00000560503 RIMBP3BA6NNM3 1639 aa20.39■□□□□ 0.86
AC009654.1-201ENST00000560503 RIMBP3Q9UFD9 1639 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms