RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.05
PSMA4-207ENST00000558635 IDI1Q13907 227 aa15.32■□□□□ 0.04
PSMA4-207ENST00000558635 PTPRTO14522 1441 aa15.32■□□□□ 0.04
PSMA4-207ENST00000558635 SYNMO15061 1565 aa15.32■□□□□ 0.04
PSMA4-207ENST00000558635 SLC52A1Q9NWF4 448 aa15.31■□□□□ 0.04
PSMA4-207ENST00000558635 LMTK3Q96Q04 1460 aa15.31■□□□□ 0.04
PSMA4-207ENST00000558635 NLRP1Q9C000 1473 aa15.31■□□□□ 0.04
PSMA4-207ENST00000558635 A2ML1A8K2U0 1454 aa15.3■□□□□ 0.04
PSMA4-207ENST00000558635 HSPA2P54652 639 aa15.3■□□□□ 0.04
PSMA4-207ENST00000558635 MYO3AQ8NEV4 1616 aa15.3■□□□□ 0.04
PSMA4-207ENST00000558635 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
PSMA4-207ENST00000558635 PLA2R1Q13018 1463 aa15.29■□□□□ 0.04
PSMA4-207ENST00000558635 CEP170BQ9Y4F5 1589 aaPredicted RBP15.28■□□□□ 0.04
PSMA4-207ENST00000558635 UGGT1Q9NYU2 1555 aa15.27■□□□□ 0.03
PSMA4-207ENST00000558635 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
PSMA4-207ENST00000558635 SPHKAPQ2M3C7 1700 aa15.26■□□□□ 0.03
PSMA4-207ENST00000558635 CHGAP10645 457 aaKnown RBP15.25■□□□□ 0.03
PSMA4-207ENST00000558635 THEMISQ8N1K5 641 aaPredicted RBP15.25■□□□□ 0.03
PSMA4-207ENST00000558635 TRPM2O94759 1503 aa15.25■□□□□ 0.03
PSMA4-207ENST00000558635 ZNF142P52746 1687 aaPredicted RBP15.25■□□□□ 0.03
PSMA4-207ENST00000558635 PIK3C2BO00750 1634 aa15.24■□□□□ 0.03
PSMA4-207ENST00000558635 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
PSMA4-207ENST00000558635 DHX57Q6P158 1386 aaKnown RBP15.23■□□□□ 0.03
PSMA4-207ENST00000558635 SSUH2Q9Y2M2 353 aa15.22■□□□□ 0.03
PSMA4-207ENST00000558635 CLTCL1P53675 1640 aa15.21■□□□□ 0.03
PSMA4-207ENST00000558635 CCDC144AA2RUR9 1427 aa15.21■□□□□ 0.03
PSMA4-207ENST00000558635 PITPNM1O00562 1244 aa15.2■□□□□ 0.02
PSMA4-207ENST00000558635 ADGRB3O60242 1522 aa15.2■□□□□ 0.02
PSMA4-207ENST00000558635 UBR1Q8IWV7 1749 aa15.2■□□□□ 0.02
PSMA4-207ENST00000558635 NCKAP5LQ9HCH0 1330 aa15.18■□□□□ 0.02
PSMA4-207ENST00000558635 TMEM131LA2VDJ0 1609 aa15.18■□□□□ 0.02
PSMA4-207ENST00000558635 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
PSMA4-207ENST00000558635 ZNF326Q5BKZ1 582 aaKnown RBP15.17■□□□□ 0.02
PSMA4-207ENST00000558635 ANKLE2Q86XL3 938 aa15.17■□□□□ 0.02
PSMA4-207ENST00000558635 KDM5AP29375 1690 aaKnown RBP15.16■□□□□ 0.02
PSMA4-207ENST00000558635 LTKP29376 864 aa15.16■□□□□ 0.02
PSMA4-207ENST00000558635 TXNDC2Q86VQ3 553 aa15.16■□□□□ 0.02
PSMA4-207ENST00000558635 ARHGAP23Q9P227 1491 aa15.15■□□□□ 0.02
PSMA4-207ENST00000558635 RGL3Q3MIN7 710 aa15.15■□□□□ 0.02
PSMA4-207ENST00000558635 EID1Q9Y6B2 187 aa15.15■□□□□ 0.02
PSMA4-207ENST00000558635 SLIT1O75093 1534 aa15.15■□□□□ 0.02
PSMA4-207ENST00000558635 RIMS2Q9UQ26 1411 aa15.14■□□□□ 0.01
PSMA4-207ENST00000558635 HDGFP51858 240 aaKnown RBP15.13■□□□□ 0.01
PSMA4-207ENST00000558635 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
PSMA4-207ENST00000558635 SPATA31E1Q6ZUB1 1445 aa15.13■□□□□ 0.01
PSMA4-207ENST00000558635 MYO5BQ9ULV0 1848 aa15.13■□□□□ 0.01
PSMA4-207ENST00000558635 ZFYVE9O95405 1425 aa15.12■□□□□ 0.01
PSMA4-207ENST00000558635 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
PSMA4-207ENST00000558635 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
PSMA4-207ENST00000558635 SCAF11Q99590 1463 aaKnown RBP15.12■□□□□ 0.01
PSMA4-207ENST00000558635 KIF1BO60333 1816 aa15.12■□□□□ 0.01
PSMA4-207ENST00000558635 STRCQ7RTU9 1775 aa15.11■□□□□ 0.01
PSMA4-207ENST00000558635 PPP1R15AO75807 674 aaPredicted RBP15.11■□□□□ 0.01
PSMA4-207ENST00000558635 RPGRIP1LQ68CZ1 1315 aa15.11■□□□□ 0.01
PSMA4-207ENST00000558635 NEUROD1Q13562 356 aa15.1■□□□□ 0.01
PSMA4-207ENST00000558635 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
PSMA4-207ENST00000558635 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
PSMA4-207ENST00000558635 MED14O60244 1454 aa15.08■□□□□ 0.01
PSMA4-207ENST00000558635 NEURL4Q96JN8 1562 aa15.08■□□□□ 0
PSMA4-207ENST00000558635 NEXMIFQ5QGS0 1516 aa15.07■□□□□ 0
PSMA4-207ENST00000558635 VGFO15240 615 aaPredicted RBP15.07■□□□□ 0
PSMA4-207ENST00000558635 CCER1Q8TC90 406 aaPredicted RBP15.07■□□□□ 0
PSMA4-207ENST00000558635 BCANQ96GW7 911 aa15.07■□□□□ 0
PSMA4-207ENST00000558635 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
PSMA4-207ENST00000558635 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
PSMA4-207ENST00000558635 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
PSMA4-207ENST00000558635 PLEKHG1Q9ULL1 1385 aa15.06■□□□□ 0
PSMA4-207ENST00000558635 DCAF11Q8TEB1 546 aa15.04■□□□□ -0
PSMA4-207ENST00000558635 SLC26A8Q96RN1 970 aa15.04■□□□□ -0
PSMA4-207ENST00000558635 ADGRF5Q8IZF2 1346 aa15.03■□□□□ -0
PSMA4-207ENST00000558635 CLSPNQ9HAW4 1339 aa15.03■□□□□ -0
PSMA4-207ENST00000558635 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
PSMA4-207ENST00000558635 FXR2P51116 673 aaKnown RBP eCLIP15.02■□□□□ -0
PSMA4-207ENST00000558635 IQGAP1P46940 1657 aa15.02□□□□□ -0.01
PSMA4-207ENST00000558635 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
PSMA4-207ENST00000558635 PPLO60437 1756 aa15.01□□□□□ -0.01
PSMA4-207ENST00000558635 TBX22Q9Y458 520 aa15□□□□□ -0.01
PSMA4-207ENST00000558635 ADAMTS13Q76LX8 1427 aa15□□□□□ -0.01
PSMA4-207ENST00000558635 STAC3Q96MF2 364 aa14.99□□□□□ -0.01
PSMA4-207ENST00000558635 IFT172Q9UG01 1749 aa14.98□□□□□ -0.01
PSMA4-207ENST00000558635 MYOM2P54296 1465 aa14.98□□□□□ -0.01
PSMA4-207ENST00000558635 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
PSMA4-207ENST00000558635 ZNF335Q9H4Z2 1342 aaPredicted RBP14.97□□□□□ -0.01
PSMA4-207ENST00000558635 SETBP1Q9Y6X0 1596 aa14.97□□□□□ -0.01
PSMA4-207ENST00000558635 NRXN1Q9ULB1 1477 aa14.96□□□□□ -0.01
PSMA4-207ENST00000558635 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.01
PSMA4-207ENST00000558635 PIK3C2GO75747 1445 aa14.96□□□□□ -0.01
PSMA4-207ENST00000558635 NRXN3Q9Y4C0 1643 aa14.95□□□□□ -0.02
PSMA4-207ENST00000558635 CFAP70Q5T0N1 1121 aa14.94□□□□□ -0.02
PSMA4-207ENST00000558635 C14orf93Q9H972 538 aaKnown RBP14.94□□□□□ -0.02
PSMA4-207ENST00000558635 METP08581 1390 aa14.94□□□□□ -0.02
PSMA4-207ENST00000558635 DIP2AQ14689 1571 aa14.94□□□□□ -0.02
PSMA4-207ENST00000558635 ALKQ9UM73 1620 aa14.93□□□□□ -0.02
PSMA4-207ENST00000558635 KCNA6P17658 529 aa14.93□□□□□ -0.02
PSMA4-207ENST00000558635 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
PSMA4-207ENST00000558635 PIK3R4Q99570 1358 aa14.91□□□□□ -0.02
PSMA4-207ENST00000558635 TMEM132EQ6IEE7 984 aa14.91□□□□□ -0.02
PSMA4-207ENST00000558635 TIMELESSQ9UNS1 1208 aa14.91□□□□□ -0.02
PSMA4-207ENST00000558635 AMOTL2Q9Y2J4 779 aa14.91□□□□□ -0.02
PSMA4-207ENST00000558635 PTPRUQ92729 1446 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms