RNA–Protein interactions for RNA: ENST00000557871.1

AC090971.3-201, humanhuman

BASIC

Gene AC090971.3, Length 1,041 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090971.3-201ENST00000557871 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
AC090971.3-201ENST00000557871 PYGBP11216 843 aa11.09□□□□□ -0.63
AC090971.3-201ENST00000557871 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
AC090971.3-201ENST00000557871 DHX29Q7Z478 1369 aaKnown RBP11.08□□□□□ -0.64
AC090971.3-201ENST00000557871 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.64
AC090971.3-201ENST00000557871 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
AC090971.3-201ENST00000557871 EIF2AK4Q9P2K8 1649 aaKnown RBP11.06□□□□□ -0.64
AC090971.3-201ENST00000557871 KIF15Q9NS87 1388 aa11.05□□□□□ -0.64
AC090971.3-201ENST00000557871 DUOX2Q9NRD8 1548 aa11.05□□□□□ -0.64
AC090971.3-201ENST00000557871 GSE1Q14687 1217 aa11.05□□□□□ -0.64
AC090971.3-201ENST00000557871 CNTLNQ9NXG0 1405 aa11.05□□□□□ -0.64
AC090971.3-201ENST00000557871 RNF17Q9BXT8 1623 aaKnown RBP11.04□□□□□ -0.64
AC090971.3-201ENST00000557871 ADGRL2O95490 1459 aa11.04□□□□□ -0.64
AC090971.3-201ENST00000557871 MROH2AA6NES4 1674 aa11.04□□□□□ -0.64
AC090971.3-201ENST00000557871 C3P01024 1663 aa11.04□□□□□ -0.64
AC090971.3-201ENST00000557871 KIF3BO15066 747 aa11.03□□□□□ -0.64
AC090971.3-201ENST00000557871 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
AC090971.3-201ENST00000557871 CLTCQ00610 1675 aaKnown RBP11.03□□□□□ -0.64
AC090971.3-201ENST00000557871 FAM135AQ9P2D6 1515 aa11.03□□□□□ -0.64
AC090971.3-201ENST00000557871 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
AC090971.3-201ENST00000557871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC090971.3-201ENST00000557871 ERBINQ96RT1 1412 aa11.02□□□□□ -0.64
AC090971.3-201ENST00000557871 RRBP1Q9P2E9 1410 aaKnown RBP11.02□□□□□ -0.64
AC090971.3-201ENST00000557871 GGT6Q6P531 493 aa11.02□□□□□ -0.65
AC090971.3-201ENST00000557871 CHIC2Q9UKJ5 165 aa11.02□□□□□ -0.65
AC090971.3-201ENST00000557871 KDM5DQ9BY66 1539 aa11.02□□□□□ -0.65
AC090971.3-201ENST00000557871 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
AC090971.3-201ENST00000557871 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
AC090971.3-201ENST00000557871 RRP7BPQ9NSQ0 103 aa11.01□□□□□ -0.65
AC090971.3-201ENST00000557871 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
AC090971.3-201ENST00000557871 MROH1Q8NDA8 1641 aa11.01□□□□□ -0.65
AC090971.3-201ENST00000557871 POTEMA6NI47 508 aa11□□□□□ -0.65
AC090971.3-201ENST00000557871 CEBPAP49715 358 aaPredicted RBP11□□□□□ -0.65
AC090971.3-201ENST00000557871 LMTK3Q96Q04 1460 aa10.99□□□□□ -0.65
AC090971.3-201ENST00000557871 PRDM15P57071 1507 aaPredicted RBP10.99□□□□□ -0.65
AC090971.3-201ENST00000557871 DEPDC5O75140 1603 aa10.98□□□□□ -0.65
AC090971.3-201ENST00000557871 ZC3H13Q5T200 1668 aaKnown RBP10.98□□□□□ -0.65
AC090971.3-201ENST00000557871 PREX1Q8TCU6 1659 aa10.98□□□□□ -0.65
AC090971.3-201ENST00000557871 ZMYM3Q14202 1370 aa10.98□□□□□ -0.65
AC090971.3-201ENST00000557871 ABCC3O15438 1527 aa10.98□□□□□ -0.65
AC090971.3-201ENST00000557871 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
AC090971.3-201ENST00000557871 POTEGQ6S5H5 508 aa10.97□□□□□ -0.65
AC090971.3-201ENST00000557871 ROCK1Q13464 1354 aa10.97□□□□□ -0.65
AC090971.3-201ENST00000557871 NPATQ14207 1427 aa10.97□□□□□ -0.65
AC090971.3-201ENST00000557871 CEP152O94986 1710 aa10.96□□□□□ -0.65
AC090971.3-201ENST00000557871 ANKRD50Q9ULJ7 1429 aa10.96□□□□□ -0.65
AC090971.3-201ENST00000557871 WASHC2CQ9Y4E1 1318 aa10.96□□□□□ -0.65
AC090971.3-201ENST00000557871 PLCG2P16885 1265 aa10.96□□□□□ -0.65
AC090971.3-201ENST00000557871 ITGAEP38570 1179 aa10.96□□□□□ -0.65
AC090971.3-201ENST00000557871 IRX5P78411 483 aaPredicted RBP10.96□□□□□ -0.65
AC090971.3-201ENST00000557871 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
AC090971.3-201ENST00000557871 PZPP20742 1482 aa10.95□□□□□ -0.66
AC090971.3-201ENST00000557871 UHRF1BP1Q6BDS2 1440 aa10.95□□□□□ -0.66
AC090971.3-201ENST00000557871 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
AC090971.3-201ENST00000557871 FAM163AQ96GL9 167 aaPredicted RBP10.95□□□□□ -0.66
AC090971.3-201ENST00000557871 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
AC090971.3-201ENST00000557871 CAMSAP1Q5T5Y3 1602 aa10.94□□□□□ -0.66
AC090971.3-201ENST00000557871 MYO3AQ8NEV4 1616 aa10.94□□□□□ -0.66
AC090971.3-201ENST00000557871 SPOCK2Q92563 424 aa10.93□□□□□ -0.66
AC090971.3-201ENST00000557871 OCEL1Q9H607 264 aa10.93□□□□□ -0.66
AC090971.3-201ENST00000557871 VWDEQ8N2E2 1590 aa10.93□□□□□ -0.66
AC090971.3-201ENST00000557871 KANK1Q14678 1352 aa10.92□□□□□ -0.66
AC090971.3-201ENST00000557871 UNC13BO14795 1591 aa10.92□□□□□ -0.66
AC090971.3-201ENST00000557871 ZNF142P52746 1687 aaPredicted RBP10.92□□□□□ -0.66
AC090971.3-201ENST00000557871 GCC2Q8IWJ2 1684 aa10.91□□□□□ -0.66
AC090971.3-201ENST00000557871 LMTK2Q8IWU2 1503 aa10.9□□□□□ -0.66
AC090971.3-201ENST00000557871 HSPA2P54652 639 aa10.9□□□□□ -0.66
AC090971.3-201ENST00000557871 LCE2DQ5TA82 110 aaPredicted RBP10.9□□□□□ -0.66
AC090971.3-201ENST00000557871 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.66
AC090971.3-201ENST00000557871 SPATA31D1Q6ZQQ2 1576 aa10.9□□□□□ -0.67
AC090971.3-201ENST00000557871 CEP170BQ9Y4F5 1589 aaPredicted RBP10.9□□□□□ -0.67
AC090971.3-201ENST00000557871 TNRQ92752 1358 aa10.9□□□□□ -0.67
AC090971.3-201ENST00000557871 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
AC090971.3-201ENST00000557871 ERVK-7P63135 1459 aa10.89□□□□□ -0.67
AC090971.3-201ENST00000557871 FBXO31Q5XUX0 539 aaPredicted RBP10.89□□□□□ -0.67
AC090971.3-201ENST00000557871 ARHGAP31Q2M1Z3 1444 aa10.89□□□□□ -0.67
AC090971.3-201ENST00000557871 HFM1A2PYH4 1435 aa10.88□□□□□ -0.67
AC090971.3-201ENST00000557871 NAIPQ13075 1403 aa10.88□□□□□ -0.67
AC090971.3-201ENST00000557871 SLAIN1Q8ND83 568 aa10.87□□□□□ -0.67
AC090971.3-201ENST00000557871 PCDH10Q9P2E7 1040 aa10.87□□□□□ -0.67
AC090971.3-201ENST00000557871 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
AC090971.3-201ENST00000557871 TET3O43151 1660 aa10.87□□□□□ -0.67
AC090971.3-201ENST00000557871 IQGAP3Q86VI3 1631 aa10.87□□□□□ -0.67
AC090971.3-201ENST00000557871 A2ML1A8K2U0 1454 aa10.87□□□□□ -0.67
AC090971.3-201ENST00000557871 NLRP1Q9C000 1473 aa10.86□□□□□ -0.67
AC090971.3-201ENST00000557871 PSEN1P49768 467 aa10.85□□□□□ -0.67
AC090971.3-201ENST00000557871 CFAP65Q6ZU64 1925 aaKnown RBP10.85□□□□□ -0.67
AC090971.3-201ENST00000557871 GOLGA2Q08379 1002 aa10.84□□□□□ -0.67
AC090971.3-201ENST00000557871 RPRD2Q5VT52 1461 aaKnown RBP10.84□□□□□ -0.67
AC090971.3-201ENST00000557871 STRCQ7RTU9 1775 aa10.84□□□□□ -0.67
AC090971.3-201ENST00000557871 PLA2R1Q13018 1463 aa10.83□□□□□ -0.68
AC090971.3-201ENST00000557871 NUP155O75694 1391 aa10.83□□□□□ -0.68
AC090971.3-201ENST00000557871 MKRN3Q13064 507 aaKnown RBP10.83□□□□□ -0.68
AC090971.3-201ENST00000557871 E9PCH4 1651 aa10.82□□□□□ -0.68
AC090971.3-201ENST00000557871 SYNMO15061 1565 aa10.82□□□□□ -0.68
AC090971.3-201ENST00000557871 UGGT1Q9NYU2 1555 aa10.82□□□□□ -0.68
AC090971.3-201ENST00000557871 NOS1P29475 1434 aa10.82□□□□□ -0.68
AC090971.3-201ENST00000557871 PDAP1Q13442 181 aaKnown RBP10.8□□□□□ -0.68
AC090971.3-201ENST00000557871 UBR1Q8IWV7 1749 aa10.8□□□□□ -0.68
AC090971.3-201ENST00000557871 PIK3C2BO00750 1634 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms