RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
CHD8-214ENST00000557727 PROM2Q8N271 834 aa13.62□□□□□ -0.23
CHD8-214ENST00000557727 PREX1Q8TCU6 1659 aa13.62□□□□□ -0.23
CHD8-214ENST00000557727 PZPP20742 1482 aa13.61□□□□□ -0.23
CHD8-214ENST00000557727 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
CHD8-214ENST00000557727 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
CHD8-214ENST00000557727 SETD5Q9C0A6 1442 aa13.6□□□□□ -0.23
CHD8-214ENST00000557727 NPATQ14207 1427 aa13.59□□□□□ -0.23
CHD8-214ENST00000557727 CEBPAP49715 358 aaPredicted RBP13.59□□□□□ -0.23
CHD8-214ENST00000557727 WASHC2CQ9Y4E1 1318 aa13.59□□□□□ -0.23
CHD8-214ENST00000557727 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
CHD8-214ENST00000557727 RAB3GAP2Q9H2M9 1393 aa13.58□□□□□ -0.24
CHD8-214ENST00000557727 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
CHD8-214ENST00000557727 ZNF142P52746 1687 aaPredicted RBP13.57□□□□□ -0.24
CHD8-214ENST00000557727 SYNMO15061 1565 aa13.57□□□□□ -0.24
CHD8-214ENST00000557727 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
CHD8-214ENST00000557727 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
CHD8-214ENST00000557727 NUP155O75694 1391 aa13.56□□□□□ -0.24
CHD8-214ENST00000557727 KANK1Q14678 1352 aa13.56□□□□□ -0.24
CHD8-214ENST00000557727 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
CHD8-214ENST00000557727 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
CHD8-214ENST00000557727 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
CHD8-214ENST00000557727 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
CHD8-214ENST00000557727 PIK3C2BO00750 1634 aa13.54□□□□□ -0.24
CHD8-214ENST00000557727 SPHKAPQ2M3C7 1700 aa13.54□□□□□ -0.24
CHD8-214ENST00000557727 FBXO31Q5XUX0 539 aaPredicted RBP13.54□□□□□ -0.24
CHD8-214ENST00000557727 NOS1P29475 1434 aa13.54□□□□□ -0.24
CHD8-214ENST00000557727 ESF1Q9H501 851 aaKnown RBP13.52□□□□□ -0.25
CHD8-214ENST00000557727 CEP170BQ9Y4F5 1589 aaPredicted RBP13.51□□□□□ -0.25
CHD8-214ENST00000557727 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
CHD8-214ENST00000557727 PLA2R1Q13018 1463 aa13.5□□□□□ -0.25
CHD8-214ENST00000557727 PTPRTO14522 1441 aa13.5□□□□□ -0.25
CHD8-214ENST00000557727 HRCP23327 699 aa13.5□□□□□ -0.25
CHD8-214ENST00000557727 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
CHD8-214ENST00000557727 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
CHD8-214ENST00000557727 TNRQ92752 1358 aa13.49□□□□□ -0.25
CHD8-214ENST00000557727 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
CHD8-214ENST00000557727 TRPM2O94759 1503 aa13.48□□□□□ -0.25
CHD8-214ENST00000557727 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
CHD8-214ENST00000557727 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
CHD8-214ENST00000557727 A2ML1A8K2U0 1454 aa13.47□□□□□ -0.25
CHD8-214ENST00000557727 NLRP1Q9C000 1473 aa13.47□□□□□ -0.25
CHD8-214ENST00000557727 STRCQ7RTU9 1775 aa13.46□□□□□ -0.25
CHD8-214ENST00000557727 UHRF1BP1Q6BDS2 1440 aa13.46□□□□□ -0.26
CHD8-214ENST00000557727 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
CHD8-214ENST00000557727 TMEM131LA2VDJ0 1609 aa13.45□□□□□ -0.26
CHD8-214ENST00000557727 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
CHD8-214ENST00000557727 ACIN1Q9UKV3 1341 aaKnown RBP13.43□□□□□ -0.26
CHD8-214ENST00000557727 PKD2Q13563 968 aa13.43□□□□□ -0.26
CHD8-214ENST00000557727 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
CHD8-214ENST00000557727 ADGRB3O60242 1522 aa13.43□□□□□ -0.26
CHD8-214ENST00000557727 KIF1BO60333 1816 aa13.41□□□□□ -0.26
CHD8-214ENST00000557727 IDI1Q13907 227 aa13.41□□□□□ -0.26
CHD8-214ENST00000557727 POLR1AO95602 1720 aaPredicted RBP13.41□□□□□ -0.26
CHD8-214ENST00000557727 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
CHD8-214ENST00000557727 SLIT1O75093 1534 aa13.39□□□□□ -0.27
CHD8-214ENST00000557727 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
CHD8-214ENST00000557727 ANKRD30BQ9BXX2 1392 aa13.38□□□□□ -0.27
CHD8-214ENST00000557727 HSPA2P54652 639 aa13.38□□□□□ -0.27
CHD8-214ENST00000557727 PCGF6Q9BYE7 350 aa13.38□□□□□ -0.27
CHD8-214ENST00000557727 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
CHD8-214ENST00000557727 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
CHD8-214ENST00000557727 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
CHD8-214ENST00000557727 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
CHD8-214ENST00000557727 SPATA31E1Q6ZUB1 1445 aa13.35□□□□□ -0.27
CHD8-214ENST00000557727 PPLO60437 1756 aa13.35□□□□□ -0.27
CHD8-214ENST00000557727 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
CHD8-214ENST00000557727 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
CHD8-214ENST00000557727 MED14O60244 1454 aa13.32□□□□□ -0.28
CHD8-214ENST00000557727 CCDC144AA2RUR9 1427 aa13.31□□□□□ -0.28
CHD8-214ENST00000557727 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
CHD8-214ENST00000557727 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
CHD8-214ENST00000557727 IQGAP1P46940 1657 aa13.31□□□□□ -0.28
CHD8-214ENST00000557727 THEMISQ8N1K5 641 aaPredicted RBP13.3□□□□□ -0.28
CHD8-214ENST00000557727 SCAF11Q99590 1463 aaKnown RBP13.29□□□□□ -0.28
CHD8-214ENST00000557727 LTKP29376 864 aa13.29□□□□□ -0.28
CHD8-214ENST00000557727 MIER1Q8N108 512 aa13.29□□□□□ -0.28
CHD8-214ENST00000557727 SETD1AO15047 1707 aaKnown RBP13.28□□□□□ -0.28
CHD8-214ENST00000557727 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
CHD8-214ENST00000557727 RIMS2Q9UQ26 1411 aa13.28□□□□□ -0.28
CHD8-214ENST00000557727 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
CHD8-214ENST00000557727 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
CHD8-214ENST00000557727 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
CHD8-214ENST00000557727 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
CHD8-214ENST00000557727 SETBP1Q9Y6X0 1596 aa13.25□□□□□ -0.29
CHD8-214ENST00000557727 NPHP4O75161 1426 aaPredicted RBP13.24□□□□□ -0.29
CHD8-214ENST00000557727 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
CHD8-214ENST00000557727 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
CHD8-214ENST00000557727 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
CHD8-214ENST00000557727 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
CHD8-214ENST00000557727 ADAMTS13Q76LX8 1427 aa13.22□□□□□ -0.29
CHD8-214ENST00000557727 PLEKHG1Q9ULL1 1385 aa13.22□□□□□ -0.29
CHD8-214ENST00000557727 TXNDC2Q86VQ3 553 aa13.22□□□□□ -0.29
CHD8-214ENST00000557727 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
CHD8-214ENST00000557727 MYOM2P54296 1465 aa13.22□□□□□ -0.29
CHD8-214ENST00000557727 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
CHD8-214ENST00000557727 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
CHD8-214ENST00000557727 RPGRIP1LQ68CZ1 1315 aa13.2□□□□□ -0.3
CHD8-214ENST00000557727 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
CHD8-214ENST00000557727 LTBP4Q8N2S1 1624 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms