RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 NLRP13Q86W25 1043 aa10.54□□□□□ -0.72
SAMD4A-211ENST00000557013 FANCAO15360 1455 aa10.53□□□□□ -0.72
SAMD4A-211ENST00000557013 GOLGA6L3A6NEY3 463 aa10.53□□□□□ -0.72
SAMD4A-211ENST00000557013 BCORL1Q5H9F3 1711 aa10.53□□□□□ -0.72
SAMD4A-211ENST00000557013 NUP155O75694 1391 aa10.53□□□□□ -0.72
SAMD4A-211ENST00000557013 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
SAMD4A-211ENST00000557013 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
SAMD4A-211ENST00000557013 LRPPRCP42704 1394 aaKnown RBP10.52□□□□□ -0.72
SAMD4A-211ENST00000557013 VGLL3A8MV65 326 aa10.52□□□□□ -0.73
SAMD4A-211ENST00000557013 CLCN1P35523 988 aa10.52□□□□□ -0.73
SAMD4A-211ENST00000557013 CRBNQ96SW2 442 aa10.52□□□□□ -0.73
SAMD4A-211ENST00000557013 PANK2Q9BZ23 570 aa10.52□□□□□ -0.73
SAMD4A-211ENST00000557013 TNNT2P45379 298 aaPredicted RBP10.52□□□□□ -0.73
SAMD4A-211ENST00000557013 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
SAMD4A-211ENST00000557013 ANKRD30AQ9BXX3 1397 aa10.51□□□□□ -0.73
SAMD4A-211ENST00000557013 DNMT1P26358 1616 aaKnown RBP10.51□□□□□ -0.73
SAMD4A-211ENST00000557013 CDK11BP21127 795 aaKnown RBP10.51□□□□□ -0.73
SAMD4A-211ENST00000557013 RGL3Q3MIN7 710 aa10.51□□□□□ -0.73
SAMD4A-211ENST00000557013 ANP32BQ92688 251 aaKnown RBP10.51□□□□□ -0.73
SAMD4A-211ENST00000557013 ARHGAP5Q13017 1502 aa10.5□□□□□ -0.73
SAMD4A-211ENST00000557013 PRDM4Q9UKN5 801 aa10.5□□□□□ -0.73
SAMD4A-211ENST00000557013 POLR1AO95602 1720 aaPredicted RBP10.5□□□□□ -0.73
SAMD4A-211ENST00000557013 MYO5CQ9NQX4 1742 aa10.49□□□□□ -0.73
SAMD4A-211ENST00000557013 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
SAMD4A-211ENST00000557013 KIAA1211Q6ZU35 1233 aa10.49□□□□□ -0.73
SAMD4A-211ENST00000557013 MYH16Q9H6N6 1097 aa10.49□□□□□ -0.73
SAMD4A-211ENST00000557013 ANKRD50Q9ULJ7 1429 aa10.49□□□□□ -0.73
SAMD4A-211ENST00000557013 TSPY4P0CV99 314 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 TSPY10P0CW01 314 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 EFCAB2Q5VUJ9 269 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 ADGRL1O94910 1474 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 NEO1Q92859 1461 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 PLCH2O75038 1416 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 KDM5CP41229 1560 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 CAMSAP2Q08AD1 1489 aa10.48□□□□□ -0.73
SAMD4A-211ENST00000557013 SCAPERQ9BY12 1400 aa10.47□□□□□ -0.73
SAMD4A-211ENST00000557013 ESPNB1AK53 854 aa10.47□□□□□ -0.73
SAMD4A-211ENST00000557013 TPM2P07951 284 aa10.47□□□□□ -0.73
SAMD4A-211ENST00000557013 RALGAPBQ86X10 1494 aa10.47□□□□□ -0.73
SAMD4A-211ENST00000557013 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
SAMD4A-211ENST00000557013 KDM4FA0A1W2PPD8 638 aa10.46□□□□□ -0.73
SAMD4A-211ENST00000557013 ARAP3Q8WWN8 1544 aa10.46□□□□□ -0.73
SAMD4A-211ENST00000557013 XRCC6P12956 609 aaKnown RBP eCLIP10.46□□□□□ -0.73
SAMD4A-211ENST00000557013 ZBTB7CA1YPR0 619 aa10.46□□□□□ -0.74
SAMD4A-211ENST00000557013 C20orf194Q5TEA3 1177 aa10.46□□□□□ -0.74
SAMD4A-211ENST00000557013 GTF2E1P29083 439 aaPredicted RBP10.45□□□□□ -0.74
SAMD4A-211ENST00000557013 AFAP1Q8N556 730 aa10.45□□□□□ -0.74
SAMD4A-211ENST00000557013 NBPF1Q3BBV0 1214 aa10.45□□□□□ -0.74
SAMD4A-211ENST00000557013 UHRF1BP1Q6BDS2 1440 aa10.44□□□□□ -0.74
SAMD4A-211ENST00000557013 PANK3Q9H999 370 aa10.44□□□□□ -0.74
SAMD4A-211ENST00000557013 CFAP74Q9C0B2 1584 aa10.44□□□□□ -0.74
SAMD4A-211ENST00000557013 CDC42BPBQ9Y5S2 1711 aa10.44□□□□□ -0.74
SAMD4A-211ENST00000557013 FRMPD1Q5SYB0 1578 aa10.44□□□□□ -0.74
SAMD4A-211ENST00000557013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.43□□□□□ -0.742e-9■■■□□ 16.9
SAMD4A-211ENST00000557013 PARD3Q8TEW0 1356 aa10.43□□□□□ -0.74
SAMD4A-211ENST00000557013 CDC42BPAQ5VT25 1732 aa10.43□□□□□ -0.74
SAMD4A-211ENST00000557013 GPATCH8Q9UKJ3 1502 aaKnown RBP10.43□□□□□ -0.74
SAMD4A-211ENST00000557013 YEATS2Q9ULM3 1422 aa10.43□□□□□ -0.74
SAMD4A-211ENST00000557013 HNRNPMP52272 730 aaKnown RBP eCLIP10.43□□□□□ -0.74
SAMD4A-211ENST00000557013 STAC3Q96MF2 364 aa10.42□□□□□ -0.74
SAMD4A-211ENST00000557013 PREX2Q70Z35 1606 aa10.42□□□□□ -0.74
SAMD4A-211ENST00000557013 RICTORQ6R327 1708 aa10.42□□□□□ -0.74
SAMD4A-211ENST00000557013 PER1O15534 1290 aaPredicted RBP10.42□□□□□ -0.74
SAMD4A-211ENST00000557013 WDR43Q15061 677 aaKnown RBP eCLIP10.42□□□□□ -0.74
SAMD4A-211ENST00000557013 SENP3Q9H4L4 574 aaPredicted RBP10.42□□□□□ -0.74
SAMD4A-211ENST00000557013 ADAMTS8Q9UP79 889 aa10.41□□□□□ -0.74
SAMD4A-211ENST00000557013 R3HCC1Q9Y3T6 440 aaKnown RBP10.41□□□□□ -0.74
SAMD4A-211ENST00000557013 POGZQ7Z3K3 1410 aa10.41□□□□□ -0.74
SAMD4A-211ENST00000557013 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
SAMD4A-211ENST00000557013 CENPQQ7L2Z9 268 aaPredicted RBP10.41□□□□□ -0.74
SAMD4A-211ENST00000557013 DHX37Q8IY37 1157 aaKnown RBP10.4□□□□□ -0.74
SAMD4A-211ENST00000557013 C9orf84Q5VXU9 1444 aa10.4□□□□□ -0.74
SAMD4A-211ENST00000557013 E9PSI1 815 aa10.4□□□□□ -0.75
SAMD4A-211ENST00000557013 DNTTIP2Q5QJE6 756 aaKnown RBP10.4□□□□□ -0.75
SAMD4A-211ENST00000557013 GGT6Q6P531 493 aa10.4□□□□□ -0.75
SAMD4A-211ENST00000557013 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.4□□□□□ -0.75
SAMD4A-211ENST00000557013 CHMP4AQ9BY43 222 aa10.4□□□□□ -0.75
SAMD4A-211ENST00000557013 TRAPPC8Q9Y2L5 1435 aa10.39□□□□□ -0.75
SAMD4A-211ENST00000557013 MSNP26038 577 aaKnown RBP10.39□□□□□ -0.75
SAMD4A-211ENST00000557013 TMF1P82094 1093 aa10.39□□□□□ -0.75
SAMD4A-211ENST00000557013 SYCP2Q9BX26 1530 aa10.39□□□□□ -0.75
SAMD4A-211ENST00000557013 BECN1Q14457 450 aa10.39□□□□□ -0.75
SAMD4A-211ENST00000557013 ADGRL2O95490 1459 aa10.39□□□□□ -0.75
SAMD4A-211ENST00000557013 ARHGEF12Q9NZN5 1544 aa10.38□□□□□ -0.75
SAMD4A-211ENST00000557013 PHF23Q9BUL5 403 aaPredicted RBP10.38□□□□□ -0.75
SAMD4A-211ENST00000557013 ZFYVE16Q7Z3T8 1539 aa10.38□□□□□ -0.75
SAMD4A-211ENST00000557013 IPO4Q8TEX9 1081 aaKnown RBP10.38□□□□□ -0.75
SAMD4A-211ENST00000557013 KNSTRNQ9Y448 316 aa10.38□□□□□ -0.75
SAMD4A-211ENST00000557013 CCDC144AA2RUR9 1427 aa10.38□□□□□ -0.75
SAMD4A-211ENST00000557013 SAMD9LQ8IVG5 1584 aa10.38□□□□□ -0.75
SAMD4A-211ENST00000557013 ZNF518AQ6AHZ1 1483 aa10.37□□□□□ -0.75
SAMD4A-211ENST00000557013 ABCC1P33527 1531 aa10.37□□□□□ -0.75
SAMD4A-211ENST00000557013 ARHGEF40Q8TER5 1519 aa10.37□□□□□ -0.75
SAMD4A-211ENST00000557013 DISP3Q9P2K9 1392 aa10.37□□□□□ -0.75
SAMD4A-211ENST00000557013 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
SAMD4A-211ENST00000557013 KDM2BQ8NHM5 1336 aa10.36□□□□□ -0.75
SAMD4A-211ENST00000557013 C8orf34Q49A92 452 aa10.36□□□□□ -0.75
SAMD4A-211ENST00000557013 ADGBQ8N7X0 1667 aa10.36□□□□□ -0.75
SAMD4A-211ENST00000557013 DUSP27Q5VZP5 1158 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms