RNA–Protein interactions for RNA: ENST00000556884.5

PPP4R4-206, Transcript of protein phosphatase 4 regulatory subunit 4, human

TSL 4

Gene PPP4R4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R4-206	ENST00000556884	IPO9	Q96P70	1041 aa	Known RBP	4.95	□□□□□ -1.62
PPP4R4-206	ENST00000556884	TSKS	Q9UJT2	592 aa		4.95	□□□□□ -1.62
PPP4R4-206	ENST00000556884		A0A0U1RQG5	324 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R4-206	ENST00000556884	ITGAE	P38570	1179 aa		4.94	□□□□□ -1.62
PPP4R4-206	ENST00000556884	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R4-206	ENST00000556884	PLA2G2E	Q9NZK7	142 aa		4.94	□□□□□ -1.62
PPP4R4-206	ENST00000556884	ONECUT3	O60422	494 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	NEFM	P07197	916 aa		4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	BCAM	P50895	628 aa		4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	HAP1	P54257	671 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	ANKK1	Q8NFD2	765 aa		4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	CDCA7L	Q96GN5	454 aa		4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	PPP4R2	Q9NY27	417 aa		4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	TIMELESS	Q9UNS1	1208 aa		4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R4-206	ENST00000556884	EEA1	Q15075	1411 aa		4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	C3orf80	F5H4A9	247 aa		4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	CCER2	I3L3R5	266 aa		4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	SMAP	O00193	183 aa		4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	PRSS12	P56730	875 aa		4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	LAPTM4B	Q86VI4	370 aa		4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	P3H3	Q8IVL6	736 aa		4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	ZFR	Q96KR1	1074 aa	Known RBP	4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	FAM198A	Q9UFP1	575 aa		4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP4R4-206	ENST00000556884	HSP90AA1	P07900	732 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R4-206	ENST00000556884	CALD1	Q05682	793 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R4-206	ENST00000556884	FAM98C	Q17RN3	349 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R4-206	ENST00000556884	PACS2	Q86VP3	889 aa		4.91	□□□□□ -1.62
PPP4R4-206	ENST00000556884	CERK	Q8TCT0	537 aa		4.91	□□□□□ -1.62
PPP4R4-206	ENST00000556884	SOWAHB	A6NEL2	793 aa		4.9	□□□□□ -1.63
PPP4R4-206	ENST00000556884	SEMA3E	O15041	775 aa		4.9	□□□□□ -1.63
PPP4R4-206	ENST00000556884	NPDC1	Q9NQX5	325 aa	Predicted RBP	4.9	□□□□□ -1.63
PPP4R4-206	ENST00000556884	BRPF3	Q9ULD4	1205 aa		4.9	□□□□□ -1.63
PPP4R4-206	ENST00000556884	NCL	P19338	710 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R4-206	ENST00000556884	RSPH4A	Q5TD94	716 aa		4.89	□□□□□ -1.63
PPP4R4-206	ENST00000556884	PADI6	Q6TGC4	694 aa		4.89	□□□□□ -1.63
PPP4R4-206	ENST00000556884	PNMA3	Q9UL41	463 aa		4.89	□□□□□ -1.63
PPP4R4-206	ENST00000556884	NBPF26	B4DH59	902 aa		4.88	□□□□□ -1.63
PPP4R4-206	ENST00000556884	NUDT18	Q6ZVK8	323 aa		4.88	□□□□□ -1.63
PPP4R4-206	ENST00000556884	TATDN2	Q93075	761 aa		4.88	□□□□□ -1.63
PPP4R4-206	ENST00000556884	LRCH3	Q96II8	777 aa		4.88	□□□□□ -1.63
PPP4R4-206	ENST00000556884	WBP1L	Q9NX94	342 aa		4.88	□□□□□ -1.63
PPP4R4-206	ENST00000556884	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R4-206	ENST00000556884	RBM27	Q9P2N5	1060 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R4-206	ENST00000556884	KDM2A	Q9Y2K7	1162 aa		4.88	□□□□□ -1.63
PPP4R4-206	ENST00000556884	SAMD7	Q7Z3H4	446 aa		4.87	□□□□□ -1.63
PPP4R4-206	ENST00000556884	TTC13	Q8NBP0	860 aa		4.87	□□□□□ -1.63
PPP4R4-206	ENST00000556884	HPS5	Q9UPZ3	1129 aa		4.87	□□□□□ -1.63
PPP4R4-206	ENST00000556884	NUTM2F	A1L443	756 aa		4.86	□□□□□ -1.63
PPP4R4-206	ENST00000556884	PDCL3	Q9H2J4	239 aa		4.86	□□□□□ -1.63
PPP4R4-206	ENST00000556884	TSR3	Q9UJK0	312 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R4-206	ENST00000556884	RNF40	O75150	1001 aa		4.85	□□□□□ -1.63
PPP4R4-206	ENST00000556884	BRD2	P25440	801 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R4-206	ENST00000556884	PTGDR	Q13258	359 aa		4.85	□□□□□ -1.63
PPP4R4-206	ENST00000556884	HOMEZ	Q8IX15	550 aa		4.85	□□□□□ -1.63
PPP4R4-206	ENST00000556884	IPO4	Q8TEX9	1081 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R4-206	ENST00000556884	PRDM4	Q9UKN5	801 aa		4.85	□□□□□ -1.63
PPP4R4-206	ENST00000556884	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.85	□□□□□ -1.63
PPP4R4-206	ENST00000556884	TESPA1	A2RU30	521 aa	Predicted RBP	4.84	□□□□□ -1.63
PPP4R4-206	ENST00000556884	TPM2	P07951	284 aa		4.84	□□□□□ -1.63
PPP4R4-206	ENST00000556884	PPP4C	P60510	307 aa		4.84	□□□□□ -1.63
PPP4R4-206	ENST00000556884	RBM26	Q5T8P6	1007 aa	Known RBP	4.84	□□□□□ -1.63
PPP4R4-206	ENST00000556884	NYAP1	Q6ZVC0	841 aa		4.84	□□□□□ -1.63
PPP4R4-206	ENST00000556884	DDRGK1	Q96HY6	314 aa		4.84	□□□□□ -1.63
PPP4R4-206	ENST00000556884	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.84	□□□□□ -1.63
PPP4R4-206	ENST00000556884	PNN	Q9H307	717 aa	Known RBP	4.84	□□□□□ -1.63
PPP4R4-206	ENST00000556884	ITGBL1	O95965	494 aa	Predicted RBP	4.83	□□□□□ -1.64
PPP4R4-206	ENST00000556884	CANX	P27824	592 aa	Known RBP	4.83	□□□□□ -1.64
PPP4R4-206	ENST00000556884	CNGB1	Q14028	1251 aa	Predicted RBP	4.83	□□□□□ -1.64
PPP4R4-206	ENST00000556884	FAM161A	Q3B820	660 aa		4.83	□□□□□ -1.64
PPP4R4-206	ENST00000556884	IFFO2	Q5TF58	517 aa		4.83	□□□□□ -1.64
PPP4R4-206	ENST00000556884	MAP7D2	Q96T17	732 aa		4.83	□□□□□ -1.64
PPP4R4-206	ENST00000556884	ANP32C	O43423	234 aa		4.82	□□□□□ -1.64
PPP4R4-206	ENST00000556884	CLCN1	P35523	988 aa		4.82	□□□□□ -1.64
PPP4R4-206	ENST00000556884	SWT1	Q5T5J6	900 aa	Known RBP	4.82	□□□□□ -1.64
PPP4R4-206	ENST00000556884	L1TD1	Q5T7N2	865 aa	Known RBP	4.82	□□□□□ -1.64
PPP4R4-206	ENST00000556884	EYA1	Q99502	592 aa		4.82	□□□□□ -1.64
PPP4R4-206	ENST00000556884		A0A0G2JS52	829 aa		4.81	□□□□□ -1.64
PPP4R4-206	ENST00000556884	FCHSD2	O94868	740 aa		4.81	□□□□□ -1.64
PPP4R4-206	ENST00000556884	FRAT1	Q92837	279 aa	Predicted RBP	4.81	□□□□□ -1.64
PPP4R4-206	ENST00000556884	ADGRG1	Q9Y653	693 aa		4.81	□□□□□ -1.64
PPP4R4-206	ENST00000556884	NCAPD3	P42695	1498 aa		4.81	□□□□□ -1.64
PPP4R4-206	ENST00000556884	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.8	□□□□□ -1.64
PPP4R4-206	ENST00000556884	HDGF	P51858	240 aa	Known RBP	4.8	□□□□□ -1.64
PPP4R4-206	ENST00000556884	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.8	□□□□□ -1.64
PPP4R4-206	ENST00000556884	CEP162	Q5TB80	1403 aa		4.8	□□□□□ -1.64
PPP4R4-206	ENST00000556884	DHX57	Q6P158	1386 aa	Known RBP	4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	TNIK	Q9UKE5	1360 aa		4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	NACAD	O15069	1562 aa		4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	TCERG1	O14776	1098 aa	Known RBP	4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	DNAJB2	P25686	324 aa		4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	APLP1	P51693	650 aa		4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	KCNC4	Q03721	635 aa		4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	UTP14C	Q5TAP6	766 aa	Known RBP	4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	SMYD5	Q6GMV2	418 aa		4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	SLF2	Q8IX21	1173 aa		4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	RBM46	Q8TBY0	533 aa	Known RBP	4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	TRIM52	Q96A61	297 aa		4.79	□□□□□ -1.64
PPP4R4-206	ENST00000556884	LAS1L	Q9Y4W2	734 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms