RNA–Protein interactions for RNA: ENST00000556884.5

PPP4R4-206, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 4

Gene PPP4R4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-206ENST00000556884 AEBP2Q6ZN18 517 aaPredicted RBP12.02□□□□□ -0.49
PPP4R4-206ENST00000556884 CHIC1Q5VXU3 224 aa11.52□□□□□ -0.57
PPP4R4-206ENST00000556884 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
PPP4R4-206ENST00000556884 PHF23Q9BUL5 403 aaPredicted RBP10.12□□□□□ -0.79
PPP4R4-206ENST00000556884 FOXD1Q16676 465 aa9.51□□□□□ -0.89
PPP4R4-206ENST00000556884 PLPPR3Q6T4P5 718 aa9.25□□□□□ -0.93
PPP4R4-206ENST00000556884 PPP6R1Q9UPN7 881 aa9.01□□□□□ -0.97
PPP4R4-206ENST00000556884 ADRA2BP18089 450 aa8.99□□□□□ -0.97
PPP4R4-206ENST00000556884 PIAS4Q8N2W9 510 aaPredicted RBP8.93□□□□□ -0.98
PPP4R4-206ENST00000556884 MSH5O43196 834 aa8.82□□□□□ -1
PPP4R4-206ENST00000556884 POTEDQ86YR6 584 aa8.41□□□□□ -1.06
PPP4R4-206ENST00000556884 MAPK8IP2Q13387 824 aaPredicted RBP8.22□□□□□ -1.09
PPP4R4-206ENST00000556884 SCAF1Q9H7N4 1312 aaKnown RBP8.17□□□□□ -1.1
PPP4R4-206ENST00000556884 PPP4R3CPQ6ZMV5 832 aa8.14□□□□□ -1.11
PPP4R4-206ENST00000556884 DMRT2Q9Y5R5 561 aa8.11□□□□□ -1.11
PPP4R4-206ENST00000556884 CNKSR2Q8WXI2 1034 aa7.95□□□□□ -1.14
PPP4R4-206ENST00000556884 HOXD11P31277 338 aaPredicted RBP7.86□□□□□ -1.15
PPP4R4-206ENST00000556884 NCBP3Q53F19 620 aaKnown RBP7.85□□□□□ -1.15
PPP4R4-206ENST00000556884 RNF216Q9NWF9 866 aaPredicted RBP7.83□□□□□ -1.16
PPP4R4-206ENST00000556884 DCAF8L1A6NGE4 600 aa7.81□□□□□ -1.16
PPP4R4-206ENST00000556884 NPM3O75607 178 aaKnown RBP7.77□□□□□ -1.17
PPP4R4-206ENST00000556884 KCNA4P22459 653 aa7.75□□□□□ -1.17
PPP4R4-206ENST00000556884 RNF39Q9H2S5 420 aa7.55□□□□□ -1.2
PPP4R4-206ENST00000556884 DNAJC5BQ9UF47 199 aa7.52□□□□□ -1.21
PPP4R4-206ENST00000556884 CACNB1Q02641 598 aaPredicted RBP7.51□□□□□ -1.21
PPP4R4-206ENST00000556884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.51□□□□□ -1.212e-6■■■□□ 16.3
PPP4R4-206ENST00000556884 C1QBPQ07021 282 aaKnown RBP7.43□□□□□ -1.22
PPP4R4-206ENST00000556884 SLC4A2P04920 1241 aa7.38□□□□□ -1.23
PPP4R4-206ENST00000556884 U3KPZ7 1027 aaPredicted RBP7.37□□□□□ -1.23
PPP4R4-206ENST00000556884 SLC4A1APQ9BWU0 796 aaKnown RBP7.33□□□□□ -1.24
PPP4R4-206ENST00000556884 SPINK5Q9NQ38 1064 aaPredicted RBP7.24□□□□□ -1.25
PPP4R4-206ENST00000556884 CAPN15O75808 1086 aa7.21□□□□□ -1.26
PPP4R4-206ENST00000556884 MYCNP04198 464 aaPredicted RBP7.17□□□□□ -1.26
PPP4R4-206ENST00000556884 FOXD4L1Q9NU39 408 aa7.17□□□□□ -1.26
PPP4R4-206ENST00000556884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.16□□□□□ -1.26
PPP4R4-206ENST00000556884 HNRNPUL2Q1KMD3 747 aaKnown RBP7.16□□□□□ -1.26
PPP4R4-206ENST00000556884 ZBTB22O15209 634 aa7.14□□□□□ -1.27
PPP4R4-206ENST00000556884 APLP2Q06481 763 aa7.14□□□□□ -1.27
PPP4R4-206ENST00000556884 SAMD1Q6SPF0 538 aaPredicted RBP7.14□□□□□ -1.27
PPP4R4-206ENST00000556884 TRHP20396 242 aaPredicted RBP7.13□□□□□ -1.27
PPP4R4-206ENST00000556884 DSG3P32926 999 aa7.12□□□□□ -1.27
PPP4R4-206ENST00000556884 ZNF219Q9P2Y4 722 aaPredicted RBP7.09□□□□□ -1.27
PPP4R4-206ENST00000556884 ABCB7O75027 752 aa7.07□□□□□ -1.28
PPP4R4-206ENST00000556884 ATF5Q9Y2D1 282 aaPredicted RBP7.02□□□□□ -1.29
PPP4R4-206ENST00000556884 POLA2Q14181 598 aa6.96□□□□□ -1.3
PPP4R4-206ENST00000556884 EHMT2Q96KQ7 1210 aa6.92□□□□□ -1.3
PPP4R4-206ENST00000556884 ATXN8OSP0DMR3 200 aa6.91□□□□□ -1.3
PPP4R4-206ENST00000556884 CSRNP3Q8WYN3 585 aa6.91□□□□□ -1.3
PPP4R4-206ENST00000556884 ZBTB12Q9Y330 459 aaPredicted RBP6.8□□□□□ -1.32
PPP4R4-206ENST00000556884 RBM42Q9BTD8 480 aaKnown RBP6.77□□□□□ -1.33
PPP4R4-206ENST00000556884 OSCARQ8IYS5 282 aa6.75□□□□□ -1.33
PPP4R4-206ENST00000556884 FBLN2P98095 1184 aa6.7□□□□□ -1.34
PPP4R4-206ENST00000556884 MKRN4PQ13434 485 aaPredicted RBP6.69□□□□□ -1.34
PPP4R4-206ENST00000556884 AKT1S1Q96B36 256 aa6.65□□□□□ -1.34
PPP4R4-206ENST00000556884 POTEHQ6S545 545 aa6.62□□□□□ -1.35
PPP4R4-206ENST00000556884 SPDYE2BA6NHP3 402 aa6.61□□□□□ -1.35
PPP4R4-206ENST00000556884 SPDYE6P0CI01 402 aa6.61□□□□□ -1.35
PPP4R4-206ENST00000556884 SPDYE2Q495Y8 402 aa6.61□□□□□ -1.35
PPP4R4-206ENST00000556884 PELP1Q8IZL8 1130 aaKnown RBP6.61□□□□□ -1.35
PPP4R4-206ENST00000556884 REM2Q8IYK8 340 aaPredicted RBP6.6□□□□□ -1.35
PPP4R4-206ENST00000556884 CHRDL2Q6WN34 429 aa6.59□□□□□ -1.35
PPP4R4-206ENST00000556884 ZNF692Q9BU19 519 aaPredicted RBP6.57□□□□□ -1.36
PPP4R4-206ENST00000556884 PITPNM1O00562 1244 aa6.55□□□□□ -1.36
PPP4R4-206ENST00000556884 MYT1Q01538 1121 aa6.54□□□□□ -1.36
PPP4R4-206ENST00000556884 SSUH2Q9Y2M2 353 aa6.54□□□□□ -1.36
PPP4R4-206ENST00000556884 PABPN1Q86U42 306 aaKnown RBP eCLIP6.48□□□□□ -1.37
PPP4R4-206ENST00000556884 PIP4P2Q8N4L2 257 aa6.47□□□□□ -1.37
PPP4R4-206ENST00000556884 CLEC11AQ9Y240 323 aa6.47□□□□□ -1.37
PPP4R4-206ENST00000556884 SPDYE1Q8NFV5 336 aaPredicted RBP6.46□□□□□ -1.38
PPP4R4-206ENST00000556884 SPDYE4A6NLX3 237 aa6.44□□□□□ -1.38
PPP4R4-206ENST00000556884 FXR2P51116 673 aaKnown RBP eCLIP6.44□□□□□ -1.38
PPP4R4-206ENST00000556884 PRKAR2AP13861 404 aaKnown RBP6.37□□□□□ -1.39
PPP4R4-206ENST00000556884 PRR29P0C7W0 189 aa6.36□□□□□ -1.39
PPP4R4-206ENST00000556884 CHADLQ6NUI6 762 aa6.35□□□□□ -1.39
PPP4R4-206ENST00000556884 HAX1O00165 279 aa6.31□□□□□ -1.4
PPP4R4-206ENST00000556884 PROM2Q8N271 834 aa6.29□□□□□ -1.4
PPP4R4-206ENST00000556884 STAG3Q9UJ98 1225 aa6.29□□□□□ -1.4
PPP4R4-206ENST00000556884 TTBK1Q5TCY1 1321 aaPredicted RBP6.28□□□□□ -1.4
PPP4R4-206ENST00000556884 FKBP8Q14318 412 aa6.27□□□□□ -1.41
PPP4R4-206ENST00000556884 EVX2Q03828 476 aa6.26□□□□□ -1.41
PPP4R4-206ENST00000556884 SP7Q8TDD2 431 aaPredicted RBP6.26□□□□□ -1.41
PPP4R4-206ENST00000556884 CREBZFQ9NS37 354 aa6.25□□□□□ -1.41
PPP4R4-206ENST00000556884 FARP1Q9Y4F1 1045 aaPredicted RBP6.24□□□□□ -1.41
PPP4R4-206ENST00000556884 C19orf67A6NJJ6 358 aa6.23□□□□□ -1.41
PPP4R4-206ENST00000556884 CD44P16070 742 aaKnown RBP6.18□□□□□ -1.42
PPP4R4-206ENST00000556884 MNX1P50219 401 aaPredicted RBP6.16□□□□□ -1.42
PPP4R4-206ENST00000556884 MIER1Q8N108 512 aa6.12□□□□□ -1.43
PPP4R4-206ENST00000556884 GABBR2O75899 941 aa6.11□□□□□ -1.43
PPP4R4-206ENST00000556884 NPM1P06748 294 aaKnown RBP eCLIP6.11□□□□□ -1.43
PPP4R4-206ENST00000556884 HRCP23327 699 aa6.11□□□□□ -1.43
PPP4R4-206ENST00000556884 ZRANB1Q9UGI0 708 aa6.11□□□□□ -1.43
PPP4R4-206ENST00000556884 PLEKHG5O94827 1062 aa6.09□□□□□ -1.43
PPP4R4-206ENST00000556884 PLCD3Q8N3E9 789 aa6.09□□□□□ -1.43
PPP4R4-206ENST00000556884 PAK3O75914 559 aaPredicted RBP6.07□□□□□ -1.44
PPP4R4-206ENST00000556884 ZNF579Q8NAF0 562 aaKnown RBP6.07□□□□□ -1.44
PPP4R4-206ENST00000556884 FBXO3Q9UK99 471 aa6.06□□□□□ -1.44
PPP4R4-206ENST00000556884 PHF12Q96QT6 1004 aa6.05□□□□□ -1.44
PPP4R4-206ENST00000556884 TSPYL2Q9H2G4 693 aaPredicted RBP6.04□□□□□ -1.44
PPP4R4-206ENST00000556884 GALR2O43603 387 aaPredicted RBP6.02□□□□□ -1.45
PPP4R4-206ENST00000556884 RASEFQ8IZ41 740 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms