RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TET3O43151 1660 aa14.48□□□□□ -0.09
SRP54-210ENST00000556380 ZNF142P52746 1687 aaPredicted RBP14.47□□□□□ -0.09
SRP54-210ENST00000556380 IDI1Q13907 227 aa14.47□□□□□ -0.09
SRP54-210ENST00000556380 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
SRP54-210ENST00000556380 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
SRP54-210ENST00000556380 SETD5Q9C0A6 1442 aa14.47□□□□□ -0.09
SRP54-210ENST00000556380 CFAP65Q6ZU64 1925 aaKnown RBP14.46□□□□□ -0.09
SRP54-210ENST00000556380 THEMISQ8N1K5 641 aaPredicted RBP14.45□□□□□ -0.1
SRP54-210ENST00000556380 SLC52A1Q9NWF4 448 aa14.45□□□□□ -0.1
SRP54-210ENST00000556380 PLA2R1Q13018 1463 aa14.44□□□□□ -0.1
SRP54-210ENST00000556380 SYNMO15061 1565 aa14.44□□□□□ -0.1
SRP54-210ENST00000556380 TRIM52Q96A61 297 aa14.44□□□□□ -0.1
SRP54-210ENST00000556380 STRCQ7RTU9 1775 aa14.43□□□□□ -0.1
SRP54-210ENST00000556380 PKD2Q13563 968 aa14.43□□□□□ -0.1
SRP54-210ENST00000556380 E9PCH4 1651 aa14.42□□□□□ -0.1
SRP54-210ENST00000556380 NCKAP5LQ9HCH0 1330 aa14.42□□□□□ -0.1
SRP54-210ENST00000556380 PTPRTO14522 1441 aa14.42□□□□□ -0.1
SRP54-210ENST00000556380 HRCP23327 699 aa14.42□□□□□ -0.1
SRP54-210ENST00000556380 UGGT1Q9NYU2 1555 aa14.42□□□□□ -0.1
SRP54-210ENST00000556380 RAB3GAP2Q9H2M9 1393 aa14.41□□□□□ -0.1
SRP54-210ENST00000556380 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
SRP54-210ENST00000556380 ANKLE2Q86XL3 938 aa14.39□□□□□ -0.11
SRP54-210ENST00000556380 MPHOSPH9Q99550 1183 aa14.39□□□□□ -0.11
SRP54-210ENST00000556380 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
SRP54-210ENST00000556380 LTKP29376 864 aa14.38□□□□□ -0.11
SRP54-210ENST00000556380 UBR1Q8IWV7 1749 aa14.38□□□□□ -0.11
SRP54-210ENST00000556380 PIK3C2BO00750 1634 aa14.37□□□□□ -0.11
SRP54-210ENST00000556380 SLIT1O75093 1534 aa14.36□□□□□ -0.11
SRP54-210ENST00000556380 TMEM2Q9UHN6 1383 aa14.36□□□□□ -0.11
SRP54-210ENST00000556380 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
SRP54-210ENST00000556380 MED14O60244 1454 aa14.35□□□□□ -0.11
SRP54-210ENST00000556380 KDM5AP29375 1690 aaKnown RBP14.34□□□□□ -0.11
SRP54-210ENST00000556380 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
SRP54-210ENST00000556380 ADGRB3O60242 1522 aa14.34□□□□□ -0.11
SRP54-210ENST00000556380 NEURL4Q96JN8 1562 aa14.34□□□□□ -0.11
SRP54-210ENST00000556380 TRPM2O94759 1503 aa14.32□□□□□ -0.12
SRP54-210ENST00000556380 TMEM131LA2VDJ0 1609 aa14.32□□□□□ -0.12
SRP54-210ENST00000556380 ZFYVE9O95405 1425 aa14.32□□□□□ -0.12
SRP54-210ENST00000556380 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
SRP54-210ENST00000556380 TRIM26Q12899 539 aaPredicted RBP14.31□□□□□ -0.12
SRP54-210ENST00000556380 EID1Q9Y6B2 187 aa14.31□□□□□ -0.12
SRP54-210ENST00000556380 NPHP4O75161 1426 aaPredicted RBP14.31□□□□□ -0.12
SRP54-210ENST00000556380 SPHKAPQ2M3C7 1700 aa14.3□□□□□ -0.12
SRP54-210ENST00000556380 HAX1O00165 279 aa14.3□□□□□ -0.12
SRP54-210ENST00000556380 CHGAP10645 457 aaKnown RBP14.3□□□□□ -0.12
SRP54-210ENST00000556380 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
SRP54-210ENST00000556380 RIMS2Q9UQ26 1411 aa14.29□□□□□ -0.12
SRP54-210ENST00000556380 CLTCL1P53675 1640 aa14.27□□□□□ -0.12
SRP54-210ENST00000556380 POLR1AO95602 1720 aaPredicted RBP14.27□□□□□ -0.13
SRP54-210ENST00000556380 ZNF335Q9H4Z2 1342 aaPredicted RBP14.26□□□□□ -0.13
SRP54-210ENST00000556380 HDGFP51858 240 aaKnown RBP14.26□□□□□ -0.13
SRP54-210ENST00000556380 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.26□□□□□ -0.13
SRP54-210ENST00000556380 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
SRP54-210ENST00000556380 ANKRD30BQ9BXX2 1392 aa14.25□□□□□ -0.13
SRP54-210ENST00000556380 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
SRP54-210ENST00000556380 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
SRP54-210ENST00000556380 PLEKHG1Q9ULL1 1385 aa14.24□□□□□ -0.13
SRP54-210ENST00000556380 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
SRP54-210ENST00000556380 IQGAP1P46940 1657 aa14.23□□□□□ -0.13
SRP54-210ENST00000556380 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
SRP54-210ENST00000556380 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
SRP54-210ENST00000556380 CCDC144AA2RUR9 1427 aa14.23□□□□□ -0.13
SRP54-210ENST00000556380 SPATA31E1Q6ZUB1 1445 aa14.23□□□□□ -0.13
SRP54-210ENST00000556380 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
SRP54-210ENST00000556380 RPGRIP1LQ68CZ1 1315 aa14.21□□□□□ -0.13
SRP54-210ENST00000556380 SLC26A8Q96RN1 970 aa14.21□□□□□ -0.13
SRP54-210ENST00000556380 PPP1R15AO75807 674 aaPredicted RBP14.2□□□□□ -0.14
SRP54-210ENST00000556380 TBX22Q9Y458 520 aa14.2□□□□□ -0.14
SRP54-210ENST00000556380 ADAMTS13Q76LX8 1427 aa14.2□□□□□ -0.14
SRP54-210ENST00000556380 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
SRP54-210ENST00000556380 NEXMIFQ5QGS0 1516 aa14.19□□□□□ -0.14
SRP54-210ENST00000556380 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
SRP54-210ENST00000556380 VGFO15240 615 aaPredicted RBP14.17□□□□□ -0.14
SRP54-210ENST00000556380 RGL3Q3MIN7 710 aa14.17□□□□□ -0.14
SRP54-210ENST00000556380 KIF1BO60333 1816 aa14.17□□□□□ -0.14
SRP54-210ENST00000556380 KCNA6P17658 529 aa14.16□□□□□ -0.14
SRP54-210ENST00000556380 BCANQ96GW7 911 aa14.16□□□□□ -0.14
SRP54-210ENST00000556380 CPS1P31327 1500 aa14.15□□□□□ -0.14
SRP54-210ENST00000556380 SETBP1Q9Y6X0 1596 aa14.14□□□□□ -0.15
SRP54-210ENST00000556380 EVX2Q03828 476 aa14.14□□□□□ -0.15
SRP54-210ENST00000556380 STRCP1A6NGW2 1772 aa14.14□□□□□ -0.15
SRP54-210ENST00000556380 ADGRF5Q8IZF2 1346 aa14.14□□□□□ -0.15
SRP54-210ENST00000556380 IQSEC2Q5JU85 1478 aa14.13□□□□□ -0.15
SRP54-210ENST00000556380 PIK3R4Q99570 1358 aa14.13□□□□□ -0.15
SRP54-210ENST00000556380 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
SRP54-210ENST00000556380 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
SRP54-210ENST00000556380 LRRC7Q96NW7 1537 aa14.12□□□□□ -0.15
SRP54-210ENST00000556380 FBXO41Q8TF61 875 aa14.12□□□□□ -0.15
SRP54-210ENST00000556380 DIP2AQ14689 1571 aa14.11□□□□□ -0.15
SRP54-210ENST00000556380 METP08581 1390 aa14.1□□□□□ -0.15
SRP54-210ENST00000556380 PTPRUQ92729 1446 aa14.1□□□□□ -0.15
SRP54-210ENST00000556380 ILDR1Q86SU0 546 aaPredicted RBP14.1□□□□□ -0.15
SRP54-210ENST00000556380 PPLO60437 1756 aa14.09□□□□□ -0.15
SRP54-210ENST00000556380 PCGF6Q9BYE7 350 aa14.09□□□□□ -0.15
SRP54-210ENST00000556380 NWD1Q149M9 1564 aa14.09□□□□□ -0.15
SRP54-210ENST00000556380 AMOTL2Q9Y2J4 779 aa14.08□□□□□ -0.16
SRP54-210ENST00000556380 NRXN1Q9ULB1 1477 aa14.07□□□□□ -0.16
SRP54-210ENST00000556380 CHD2O14647 1828 aaKnown RBP14.07□□□□□ -0.16
SRP54-210ENST00000556380 PROSER2Q86WR7 435 aaPredicted RBP14.07□□□□□ -0.16
SRP54-210ENST00000556380 TMEM94Q12767 1356 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms