RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 KCNK17Q96T54 332 aa15.46■□□□□ 0.07
GTF2A1-204ENST00000556268 ADAM33Q9BZ11 813 aa15.46■□□□□ 0.07
GTF2A1-204ENST00000556268 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
GTF2A1-204ENST00000556268 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
GTF2A1-204ENST00000556268 SPNS2Q8IVW8 549 aa15.45■□□□□ 0.06
GTF2A1-204ENST00000556268 TSPOAP1O95153 1857 aa15.44■□□□□ 0.06
GTF2A1-204ENST00000556268 TYW1BQ6NUM6 668 aa15.43■□□□□ 0.06
GTF2A1-204ENST00000556268 ANKRD13DQ6ZTN6 518 aa15.43■□□□□ 0.06
GTF2A1-204ENST00000556268 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
GTF2A1-204ENST00000556268 KDM5BQ9UGL1 1544 aa15.43■□□□□ 0.06
GTF2A1-204ENST00000556268 DMRTA1Q5VZB9 504 aa15.42■□□□□ 0.06
GTF2A1-204ENST00000556268 UGGT2Q9NYU1 1516 aa15.42■□□□□ 0.06
GTF2A1-204ENST00000556268 COL17A1Q9UMD9 1497 aaPredicted RBP15.41■□□□□ 0.06
GTF2A1-204ENST00000556268 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
GTF2A1-204ENST00000556268 FBXW7Q969H0 707 aa15.4■□□□□ 0.06
GTF2A1-204ENST00000556268 KCNH8Q96L42 1107 aa15.4■□□□□ 0.06
GTF2A1-204ENST00000556268 EPAS1Q99814 870 aa15.4■□□□□ 0.06
GTF2A1-204ENST00000556268 EPRSP07814 1512 aaKnown RBP15.39■□□□□ 0.05
GTF2A1-204ENST00000556268 PTPREP23469 700 aa15.39■□□□□ 0.05
GTF2A1-204ENST00000556268 NBR1Q14596 966 aa15.39■□□□□ 0.05
GTF2A1-204ENST00000556268 PPRC1Q5VV67 1664 aaKnown RBP15.37■□□□□ 0.05
GTF2A1-204ENST00000556268 GRXCR2A6NFK2 248 aa15.36■□□□□ 0.05
GTF2A1-204ENST00000556268 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
GTF2A1-204ENST00000556268 MMRN1Q13201 1228 aa15.33■□□□□ 0.04
GTF2A1-204ENST00000556268 ADGRD1Q6QNK2 874 aa15.33■□□□□ 0.04
GTF2A1-204ENST00000556268 EN1Q05925 392 aaPredicted RBP15.32■□□□□ 0.04
GTF2A1-204ENST00000556268 PRIM1P49642 420 aaKnown RBP15.31■□□□□ 0.04
GTF2A1-204ENST00000556268 TK2O00142 265 aa15.3■□□□□ 0.04
GTF2A1-204ENST00000556268 KIAA0556O60303 1618 aa15.3■□□□□ 0.04
GTF2A1-204ENST00000556268 TEX14Q8IWB6 1497 aa15.3■□□□□ 0.04
GTF2A1-204ENST00000556268 MAP3K4Q9Y6R4 1608 aa15.3■□□□□ 0.04
GTF2A1-204ENST00000556268 PPP1R3GB7ZBB8 358 aa15.29■□□□□ 0.04
GTF2A1-204ENST00000556268 MAP3K7O43318 606 aa15.29■□□□□ 0.04
GTF2A1-204ENST00000556268 MLLT3P42568 568 aaPredicted RBP15.29■□□□□ 0.04
GTF2A1-204ENST00000556268 C6orf132Q5T0Z8 1188 aa15.29■□□□□ 0.04
GTF2A1-204ENST00000556268 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
GTF2A1-204ENST00000556268 WDR7Q9Y4E6 1490 aa15.28■□□□□ 0.04
GTF2A1-204ENST00000556268 COL9A1P20849 921 aa15.28■□□□□ 0.04
GTF2A1-204ENST00000556268 OSBPP22059 807 aa15.28■□□□□ 0.04
GTF2A1-204ENST00000556268 ADGRL1O94910 1474 aa15.27■□□□□ 0.04
GTF2A1-204ENST00000556268 TSR1Q2NL82 804 aaKnown RBP15.27■□□□□ 0.04
GTF2A1-204ENST00000556268 ZBED2Q9BTP6 218 aa15.27■□□□□ 0.04
GTF2A1-204ENST00000556268 GOLGA3Q08378 1498 aa15.27■□□□□ 0.03
GTF2A1-204ENST00000556268 PRXQ9BXM0 1461 aa15.27■□□□□ 0.03
GTF2A1-204ENST00000556268 VPS9D1Q9Y2B5 631 aa15.26■□□□□ 0.03
GTF2A1-204ENST00000556268 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
GTF2A1-204ENST00000556268 SEMA3EO15041 775 aa15.25■□□□□ 0.03
GTF2A1-204ENST00000556268 MAGI3Q5TCQ9 1506 aa15.25■□□□□ 0.03
GTF2A1-204ENST00000556268 SLC4A5Q9BY07 1137 aa15.24■□□□□ 0.03
GTF2A1-204ENST00000556268 ABCA8O94911 1581 aa15.24■□□□□ 0.03
GTF2A1-204ENST00000556268 HRO43593 1189 aa15.23■□□□□ 0.03
GTF2A1-204ENST00000556268 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
GTF2A1-204ENST00000556268 PROX2Q3B8N5 592 aa15.2■□□□□ 0.02
GTF2A1-204ENST00000556268 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
GTF2A1-204ENST00000556268 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
GTF2A1-204ENST00000556268 RNF166Q96A37 237 aaPredicted RBP15.18■□□□□ 0.02
GTF2A1-204ENST00000556268 ATP10BO94823 1461 aa15.17■□□□□ 0.02
GTF2A1-204ENST00000556268 PHLDB1Q86UU1 1377 aa15.15■□□□□ 0.02
GTF2A1-204ENST00000556268 ARAP3Q8WWN8 1544 aa15.15■□□□□ 0.02
GTF2A1-204ENST00000556268 CTTNBP2Q8WZ74 1663 aa15.15■□□□□ 0.02
GTF2A1-204ENST00000556268 CFAP43Q8NDM7 1665 aa15.14■□□□□ 0.01
GTF2A1-204ENST00000556268 TESPA1A2RU30 521 aaPredicted RBP15.14■□□□□ 0.01
GTF2A1-204ENST00000556268 BHMG1C9JSJ3 638 aaPredicted RBP15.12■□□□□ 0.01
GTF2A1-204ENST00000556268 ARID3CA6NKF2 412 aa15.11■□□□□ 0.01
GTF2A1-204ENST00000556268 STAC3Q96MF2 364 aa15.11■□□□□ 0.01
GTF2A1-204ENST00000556268 TRIM6-TRIM34B2RNG4 842 aa15.1■□□□□ 0.01
GTF2A1-204ENST00000556268 RABGEF1Q9UJ41 708 aa15.1■□□□□ 0.01
GTF2A1-204ENST00000556268 CERKQ8TCT0 537 aa15.09■□□□□ 0.01
GTF2A1-204ENST00000556268 HECW2Q9P2P5 1572 aa15.08■□□□□ 0
GTF2A1-204ENST00000556268 RAPGEF3O95398 923 aa15.08■□□□□ 0
GTF2A1-204ENST00000556268 NBPF3Q9H094 633 aa15.08■□□□□ 0
GTF2A1-204ENST00000556268 KIAA1468Q9P260 1216 aa15.08■□□□□ 0
GTF2A1-204ENST00000556268 MRPL50Q8N5N7 158 aaKnown RBP15.06■□□□□ 0
GTF2A1-204ENST00000556268 CDCA7LQ96GN5 454 aa15.06■□□□□ 0
GTF2A1-204ENST00000556268 NPDC1Q9NQX5 325 aaPredicted RBP15.06■□□□□ 0
GTF2A1-204ENST00000556268 TSKSQ9UJT2 592 aa15.06■□□□□ 0
GTF2A1-204ENST00000556268 ONECUT3O60422 494 aaPredicted RBP15.05■□□□□ -0
GTF2A1-204ENST00000556268 PRSS12P56730 875 aa15.05■□□□□ -0
GTF2A1-204ENST00000556268 ABCA9Q8IUA7 1624 aa15.03■□□□□ -0
GTF2A1-204ENST00000556268 NEO1Q92859 1461 aa15.03■□□□□ -0
GTF2A1-204ENST00000556268 SMYD5Q6GMV2 418 aa15.03■□□□□ -0
GTF2A1-204ENST00000556268 SAMD9Q5K651 1589 aa15.02■□□□□ -0
GTF2A1-204ENST00000556268 PLEKHD1A6NEE1 506 aa15.02■□□□□ -0
GTF2A1-204ENST00000556268 RBM26Q5T8P6 1007 aaKnown RBP15.02■□□□□ -0
GTF2A1-204ENST00000556268 FAM198AQ9UFP1 575 aa15.02■□□□□ -0
GTF2A1-204ENST00000556268 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
GTF2A1-204ENST00000556268 KCTD12Q96CX2 325 aaKnown RBP15.01□□□□□ -0.01
GTF2A1-204ENST00000556268 PTGDRQ13258 359 aa15□□□□□ -0.01
GTF2A1-204ENST00000556268 SEPT9Q9UHD8 586 aaPredicted RBP15□□□□□ -0.01
GTF2A1-204ENST00000556268 NUP153P49790 1475 aaKnown RBP15□□□□□ -0.01
GTF2A1-204ENST00000556268 PACS2Q86VP3 889 aa14.99□□□□□ -0.01
GTF2A1-204ENST00000556268 RBM27Q9P2N5 1060 aaKnown RBP14.99□□□□□ -0.01
GTF2A1-204ENST00000556268 EEA1Q15075 1411 aa14.99□□□□□ -0.01
GTF2A1-204ENST00000556268 PTPRMP28827 1452 aa14.98□□□□□ -0.01
GTF2A1-204ENST00000556268 PADI6Q6TGC4 694 aa14.98□□□□□ -0.01
GTF2A1-204ENST00000556268 KIF21BO75037 1637 aa14.97□□□□□ -0.01
GTF2A1-204ENST00000556268 RAPGEF6Q8TEU7 1601 aa14.97□□□□□ -0.01
GTF2A1-204ENST00000556268 GOLGA8CPA6NN73 597 aa14.97□□□□□ -0.01
GTF2A1-204ENST00000556268 ADAMTSL3P82987 1691 aa14.97□□□□□ -0.01
GTF2A1-204ENST00000556268 LAPTM4BQ86VI4 370 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms