RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
PRKCH-205ENST00000553726 OSBPP22059 807 aa12.39□□□□□ -0.43
PRKCH-205ENST00000553726 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
PRKCH-205ENST00000553726 WNT2BQ93097 391 aa12.39□□□□□ -0.43
PRKCH-205ENST00000553726 ABCA5Q8WWZ7 1642 aa12.38□□□□□ -0.43
PRKCH-205ENST00000553726 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
PRKCH-205ENST00000553726 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
PRKCH-205ENST00000553726 THSD4Q6ZMP0 1018 aa12.36□□□□□ -0.43
PRKCH-205ENST00000553726 PTPN5P54829 565 aa12.35□□□□□ -0.43
PRKCH-205ENST00000553726 P3H3Q8IVL6 736 aa12.35□□□□□ -0.43
PRKCH-205ENST00000553726 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
PRKCH-205ENST00000553726 BIVM-ERCC5R4GMW8 1640 aa12.34□□□□□ -0.43
PRKCH-205ENST00000553726 TOP2BQ02880 1626 aa12.33□□□□□ -0.43
PRKCH-205ENST00000553726 PACS2Q86VP3 889 aa12.32□□□□□ -0.44
PRKCH-205ENST00000553726 TSKSQ9UJT2 592 aa12.32□□□□□ -0.44
PRKCH-205ENST00000553726 PRSS12P56730 875 aa12.31□□□□□ -0.44
PRKCH-205ENST00000553726 ANKK1Q8NFD2 765 aa12.31□□□□□ -0.44
PRKCH-205ENST00000553726 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
PRKCH-205ENST00000553726 SEPT9Q9UHD8 586 aaPredicted RBP12.31□□□□□ -0.44
PRKCH-205ENST00000553726 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
PRKCH-205ENST00000553726 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-205ENST00000553726 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
PRKCH-205ENST00000553726 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
PRKCH-205ENST00000553726 ZFRQ96KR1 1074 aaKnown RBP12.29□□□□□ -0.44
PRKCH-205ENST00000553726 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
PRKCH-205ENST00000553726 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
PRKCH-205ENST00000553726 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
PRKCH-205ENST00000553726 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.44
PRKCH-205ENST00000553726 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
PRKCH-205ENST00000553726 NUP160Q12769 1436 aa12.26□□□□□ -0.45
PRKCH-205ENST00000553726 SOWAHBA6NEL2 793 aa12.25□□□□□ -0.45
PRKCH-205ENST00000553726 RBM27Q9P2N5 1060 aaKnown RBP12.25□□□□□ -0.45
PRKCH-205ENST00000553726 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
PRKCH-205ENST00000553726 BCAMP50895 628 aa12.24□□□□□ -0.45
PRKCH-205ENST00000553726 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-205ENST00000553726 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
PRKCH-205ENST00000553726 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
PRKCH-205ENST00000553726 TATDN2Q93075 761 aa12.21□□□□□ -0.45
PRKCH-205ENST00000553726 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
PRKCH-205ENST00000553726 SMAPO00193 183 aa12.2□□□□□ -0.46
PRKCH-205ENST00000553726 SEMA3EO15041 775 aa12.2□□□□□ -0.46
PRKCH-205ENST00000553726 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
PRKCH-205ENST00000553726 TTC13Q8NBP0 860 aa12.19□□□□□ -0.46
PRKCH-205ENST00000553726 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.19□□□□□ -0.46
PRKCH-205ENST00000553726 PNMA3Q9UL41 463 aa12.19□□□□□ -0.46
PRKCH-205ENST00000553726 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
PRKCH-205ENST00000553726 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
PRKCH-205ENST00000553726 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
PRKCH-205ENST00000553726 PADI6Q6TGC4 694 aa12.17□□□□□ -0.46
PRKCH-205ENST00000553726 NUDT18Q6ZVK8 323 aa12.17□□□□□ -0.46
PRKCH-205ENST00000553726 NYAP1Q6ZVC0 841 aa12.16□□□□□ -0.46
PRKCH-205ENST00000553726 WBP1LQ9NX94 342 aa12.16□□□□□ -0.46
PRKCH-205ENST00000553726 PRG4Q92954 1404 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-205ENST00000553726 TSR3Q9UJK0 312 aaKnown RBP12.15□□□□□ -0.46
PRKCH-205ENST00000553726 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
PRKCH-205ENST00000553726 PTGDRQ13258 359 aa12.13□□□□□ -0.47
PRKCH-205ENST00000553726 IFFO2Q5TF58 517 aa12.13□□□□□ -0.47
PRKCH-205ENST00000553726 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
PRKCH-205ENST00000553726 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
PRKCH-205ENST00000553726 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
PRKCH-205ENST00000553726 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-205ENST00000553726 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
PRKCH-205ENST00000553726 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
PRKCH-205ENST00000553726 CUL7Q14999 1698 aa12.1□□□□□ -0.47
PRKCH-205ENST00000553726 IGF1RP08069 1367 aa12.09□□□□□ -0.47
PRKCH-205ENST00000553726 HDGFP51858 240 aaKnown RBP12.09□□□□□ -0.47
PRKCH-205ENST00000553726 PPP4CP60510 307 aa12.09□□□□□ -0.47
PRKCH-205ENST00000553726 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
PRKCH-205ENST00000553726 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
PRKCH-205ENST00000553726 EYA1Q99502 592 aa12.07□□□□□ -0.48
PRKCH-205ENST00000553726 FCHSD2O94868 740 aa12.06□□□□□ -0.48
PRKCH-205ENST00000553726 ITGBL1O95965 494 aaPredicted RBP12.06□□□□□ -0.48
PRKCH-205ENST00000553726 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
PRKCH-205ENST00000553726 RBM26Q5T8P6 1007 aaKnown RBP12.03□□□□□ -0.48
PRKCH-205ENST00000553726 CARMIL1Q5VZK9 1371 aa12.03□□□□□ -0.48
PRKCH-205ENST00000553726 MAPKBP1O60336 1514 aa12.02□□□□□ -0.48
PRKCH-205ENST00000553726 ABCC10Q5T3U5 1492 aa12.02□□□□□ -0.49
PRKCH-205ENST00000553726 RNF40O75150 1001 aa12.01□□□□□ -0.49
PRKCH-205ENST00000553726 FAM69CQ0P6D2 419 aa12.01□□□□□ -0.49
PRKCH-205ENST00000553726 SWT1Q5T5J6 900 aaKnown RBP12.01□□□□□ -0.49
PRKCH-205ENST00000553726 ADGRG1Q9Y653 693 aa12.01□□□□□ -0.49
PRKCH-205ENST00000553726 A0A0G2JS52 829 aa12□□□□□ -0.49
PRKCH-205ENST00000553726 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
PRKCH-205ENST00000553726 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
PRKCH-205ENST00000553726 KCNC4Q03721 635 aa11.99□□□□□ -0.49
PRKCH-205ENST00000553726 HIC1Q14526 733 aa11.99□□□□□ -0.49
PRKCH-205ENST00000553726 SLF2Q8IX21 1173 aa11.99□□□□□ -0.49
PRKCH-205ENST00000553726 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
PRKCH-205ENST00000553726 NECTIN2Q92692 538 aa11.98□□□□□ -0.49
PRKCH-205ENST00000553726 PTPRGP23470 1445 aa11.97□□□□□ -0.49
PRKCH-205ENST00000553726 DNAJB2P25686 324 aa11.97□□□□□ -0.49
PRKCH-205ENST00000553726 TNIKQ9UKE5 1360 aa11.96□□□□□ -0.49
PRKCH-205ENST00000553726 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
PRKCH-205ENST00000553726 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
PRKCH-205ENST00000553726 DIP2BQ9P265 1576 aa11.96□□□□□ -0.5
PRKCH-205ENST00000553726 IQGAP2Q13576 1575 aa11.94□□□□□ -0.5
PRKCH-205ENST00000553726 RGS20O76081 388 aa11.94□□□□□ -0.5
PRKCH-205ENST00000553726 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
PRKCH-205ENST00000553726 RCCD1A6NED2 376 aa11.93□□□□□ -0.5
PRKCH-205ENST00000553726 OATP04181 439 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms