RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 OSCARQ8IYS5 282 aa7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 SECISBP2LQ93073 1101 aaKnown RBP7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 ERBINQ96RT1 1412 aa7.48□□□□□ -1.21
RAB3GAP1-207ENST00000539493 FBXO3Q9UK99 471 aa7.48□□□□□ -1.21
RAB3GAP1-207ENST00000539493 TCERG1O14776 1098 aaKnown RBP7.48□□□□□ -1.21
RAB3GAP1-207ENST00000539493 ZNF830Q96NB3 372 aaPredicted RBP7.48□□□□□ -1.21
RAB3GAP1-207ENST00000539493 MAGI2Q86UL8 1455 aa7.48□□□□□ -1.21
RAB3GAP1-207ENST00000539493 ABCA9Q8IUA7 1624 aa7.47□□□□□ -1.21
RAB3GAP1-207ENST00000539493 KIF20AO95235 890 aa7.47□□□□□ -1.21
RAB3GAP1-207ENST00000539493 MTERF4Q7Z6M4 381 aaKnown RBP7.47□□□□□ -1.21
RAB3GAP1-207ENST00000539493 IQGAP3Q86VI3 1631 aa7.47□□□□□ -1.21
RAB3GAP1-207ENST00000539493 UHRF1BP1Q6BDS2 1440 aa7.47□□□□□ -1.21
RAB3GAP1-207ENST00000539493 ASXL2Q76L83 1435 aa7.47□□□□□ -1.21
RAB3GAP1-207ENST00000539493 SLC20A2Q08357 652 aa7.47□□□□□ -1.21
RAB3GAP1-207ENST00000539493 ZFYVE16Q7Z3T8 1539 aa7.46□□□□□ -1.21
RAB3GAP1-207ENST00000539493 FANCAO15360 1455 aa7.46□□□□□ -1.21
RAB3GAP1-207ENST00000539493 TAF3Q5VWG9 929 aa7.46□□□□□ -1.22
RAB3GAP1-207ENST00000539493 RTEL1-TNFRSF6BF6WH68 1400 aa7.46□□□□□ -1.22
RAB3GAP1-207ENST00000539493 CCDC7Q96M83 1385 aa7.46□□□□□ -1.22
RAB3GAP1-207ENST00000539493 BACH2Q9BYV9 841 aa7.46□□□□□ -1.22
RAB3GAP1-207ENST00000539493 AFAP1Q8N556 730 aa7.45□□□□□ -1.22
RAB3GAP1-207ENST00000539493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.45□□□□□ -1.223e-6■□□□□ 8.7
RAB3GAP1-207ENST00000539493 PLA2R1Q13018 1463 aa7.45□□□□□ -1.22
RAB3GAP1-207ENST00000539493 SPAG9O60271 1321 aaKnown RBP7.45□□□□□ -1.22
RAB3GAP1-207ENST00000539493 RALGAPBQ86X10 1494 aa7.45□□□□□ -1.22
RAB3GAP1-207ENST00000539493 RGS22Q8NE09 1264 aa7.45□□□□□ -1.22
RAB3GAP1-207ENST00000539493 CCDC144AA2RUR9 1427 aa7.45□□□□□ -1.22
RAB3GAP1-207ENST00000539493 CNTLNQ9NXG0 1405 aa7.45□□□□□ -1.22
RAB3GAP1-207ENST00000539493 FSD2A1L4K1 749 aa7.45□□□□□ -1.22
RAB3GAP1-207ENST00000539493 IRX6P78412 446 aaPredicted RBP7.44□□□□□ -1.22
RAB3GAP1-207ENST00000539493 PPP4R3BQ5MIZ7 849 aa7.44□□□□□ -1.22
RAB3GAP1-207ENST00000539493 USP47Q96K76 1375 aa7.44□□□□□ -1.22
RAB3GAP1-207ENST00000539493 KDM5CP41229 1560 aa7.44□□□□□ -1.22
RAB3GAP1-207ENST00000539493 SMG6Q86US8 1419 aaKnown RBP7.44□□□□□ -1.22
RAB3GAP1-207ENST00000539493 ADGRL1O94910 1474 aa7.44□□□□□ -1.22
RAB3GAP1-207ENST00000539493 POLR1AO95602 1720 aaPredicted RBP7.44□□□□□ -1.22
RAB3GAP1-207ENST00000539493 KIF7Q2M1P5 1343 aa7.43□□□□□ -1.22
RAB3GAP1-207ENST00000539493 GTPBP4Q9BZE4 634 aaKnown RBP7.43□□□□□ -1.22
RAB3GAP1-207ENST00000539493 ATP10AO60312 1499 aa7.43□□□□□ -1.22
RAB3GAP1-207ENST00000539493 INO80Q9ULG1 1556 aaPredicted RBP7.43□□□□□ -1.22
RAB3GAP1-207ENST00000539493 PLPPR3Q6T4P5 718 aa7.43□□□□□ -1.22
RAB3GAP1-207ENST00000539493 ATP7AQ04656 1500 aa7.43□□□□□ -1.22
RAB3GAP1-207ENST00000539493 ANP32BQ92688 251 aaKnown RBP7.43□□□□□ -1.22
RAB3GAP1-207ENST00000539493 SCAPERQ9BY12 1400 aa7.42□□□□□ -1.22
RAB3GAP1-207ENST00000539493 ZBED9Q6R2W3 1325 aa7.42□□□□□ -1.22
RAB3GAP1-207ENST00000539493 KDM2AQ9Y2K7 1162 aa7.42□□□□□ -1.22
RAB3GAP1-207ENST00000539493 BCORL1Q5H9F3 1711 aa7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 NPM1P06748 294 aaKnown RBP eCLIP7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 ZSCAN20P17040 1043 aaPredicted RBP7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 PDE4AP27815 886 aa7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 DEPDC5O75140 1603 aa7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 LETM1O95202 739 aaPredicted RBP7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 CARD11Q9BXL7 1154 aa7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 A2MP01023 1474 aa7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 PRAG1Q86YV5 1406 aa7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 ARID3AQ99856 593 aa7.41□□□□□ -1.22
RAB3GAP1-207ENST00000539493 RIPK4P57078 832 aa7.4□□□□□ -1.22
RAB3GAP1-207ENST00000539493 RGL3Q3MIN7 710 aa7.4□□□□□ -1.23
RAB3GAP1-207ENST00000539493 E9PCH4 1651 aa7.39□□□□□ -1.23
RAB3GAP1-207ENST00000539493 TRPM1Q7Z4N2 1603 aa7.39□□□□□ -1.23
RAB3GAP1-207ENST00000539493 ROCK2O75116 1388 aaKnown RBP7.39□□□□□ -1.23
RAB3GAP1-207ENST00000539493 GOLGA6L3A6NEY3 463 aa7.39□□□□□ -1.23
RAB3GAP1-207ENST00000539493 PRKRIP1Q9H875 184 aaPredicted RBP7.39□□□□□ -1.23
RAB3GAP1-207ENST00000539493 ISY1Q9ULR0 285 aaKnown RBP7.39□□□□□ -1.23
RAB3GAP1-207ENST00000539493 ZNF518AQ6AHZ1 1483 aa7.39□□□□□ -1.23
RAB3GAP1-207ENST00000539493 VWDEQ8N2E2 1590 aa7.39□□□□□ -1.23
RAB3GAP1-207ENST00000539493 ESPNB1AK53 854 aa7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 HNRNPUQ00839 825 aaKnown RBP eCLIP7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 DHX29Q7Z478 1369 aaKnown RBP7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 CD109Q6YHK3 1445 aa7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 EIF2AK4Q9P2K8 1649 aaKnown RBP7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 CLGNO14967 610 aa7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 TRPM2O94759 1503 aa7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 PRDM15P57071 1507 aaPredicted RBP7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 KIDINS220Q9ULH0 1771 aa7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 XRCC6P12956 609 aaKnown RBP eCLIP7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 GRIPAP1Q4V328 841 aa7.38□□□□□ -1.23
RAB3GAP1-207ENST00000539493 ST20-MTHFSA0A0A6YYL1 179 aa7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 PTPRTO14522 1441 aa7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 TET3O43151 1660 aa7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 IRX3P78415 501 aaPredicted RBP7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 MROH1Q8NDA8 1641 aa7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 CFAP74Q9C0B2 1584 aa7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 GPRASP1Q5JY77 1395 aa7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 KIF3BO15066 747 aa7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 FRAT2O75474 233 aaPredicted RBP7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 POGZQ7Z3K3 1410 aa7.37□□□□□ -1.23
RAB3GAP1-207ENST00000539493 OFD1O75665 1012 aa7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 PSEN1P49768 467 aa7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 ZHX1Q9UKY1 873 aaPredicted RBP7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 KANK1Q14678 1352 aa7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 SPHKAPQ2M3C7 1700 aa7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 NBPF1Q3BBV0 1214 aa7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 AXDND1Q5T1B0 1012 aaPredicted RBP7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 YY1AP1Q9H869 796 aa7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 LAMC1P11047 1609 aa7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 CCDC184Q52MB2 194 aa7.36□□□□□ -1.23
RAB3GAP1-207ENST00000539493 VIRMAQ69YN4 1812 aaKnown RBP7.35□□□□□ -1.23
RAB3GAP1-207ENST00000539493 TNNT2P45379 298 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms