RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 ZFYVE9O95405 1425 aa25.53■■□□□ 1.68
SLC3A2-213ENST00000539458 PCGF6Q9BYE7 350 aa25.52■■□□□ 1.68
SLC3A2-213ENST00000539458 ANKRD30BQ9BXX2 1392 aa25.52■■□□□ 1.68
SLC3A2-213ENST00000539458 EID1Q9Y6B2 187 aa25.51■■□□□ 1.67
SLC3A2-213ENST00000539458 RIMS2Q9UQ26 1411 aa25.51■■□□□ 1.67
SLC3A2-213ENST00000539458 TXNDC2Q86VQ3 553 aa25.5■■□□□ 1.67
SLC3A2-213ENST00000539458 IQGAP1P46940 1657 aa25.49■■□□□ 1.67
SLC3A2-213ENST00000539458 NPHP4O75161 1426 aaPredicted RBP25.49■■□□□ 1.67
SLC3A2-213ENST00000539458 LTKP29376 864 aa25.49■■□□□ 1.67
SLC3A2-213ENST00000539458 ZNF335Q9H4Z2 1342 aaPredicted RBP25.46■■□□□ 1.67
SLC3A2-213ENST00000539458 UBAP1LF5GYI3 381 aa25.46■■□□□ 1.67
SLC3A2-213ENST00000539458 HDGFP51858 240 aaKnown RBP25.46■■□□□ 1.67
SLC3A2-213ENST00000539458 ZNF326Q5BKZ1 582 aaKnown RBP25.45■■□□□ 1.66
SLC3A2-213ENST00000539458 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.45■■□□□ 1.66
SLC3A2-213ENST00000539458 SPATA31E1Q6ZUB1 1445 aa25.45■■□□□ 1.66
SLC3A2-213ENST00000539458 DHX57Q6P158 1386 aaKnown RBP25.44■■□□□ 1.66
SLC3A2-213ENST00000539458 NEXMIFQ5QGS0 1516 aa25.44■■□□□ 1.66
SLC3A2-213ENST00000539458 ILDR2Q71H61 639 aa25.44■■□□□ 1.66
SLC3A2-213ENST00000539458 SOCS7O14512 581 aa25.43■■□□□ 1.66
SLC3A2-213ENST00000539458 PPP1R15AO75807 674 aaPredicted RBP25.41■■□□□ 1.66
SLC3A2-213ENST00000539458 PLEKHG1Q9ULL1 1385 aa25.4■■□□□ 1.66
SLC3A2-213ENST00000539458 RPGRIP1LQ68CZ1 1315 aa25.39■■□□□ 1.66
SLC3A2-213ENST00000539458 PPLO60437 1756 aa25.39■■□□□ 1.65
SLC3A2-213ENST00000539458 NUTM2DQ5VT03 806 aaPredicted RBP25.36■■□□□ 1.65
SLC3A2-213ENST00000539458 IFT172Q9UG01 1749 aa25.36■■□□□ 1.65
SLC3A2-213ENST00000539458 RGL3Q3MIN7 710 aa25.34■■□□□ 1.65
SLC3A2-213ENST00000539458 SETBP1Q9Y6X0 1596 aa25.32■■□□□ 1.64
SLC3A2-213ENST00000539458 DIP2AQ14689 1571 aa25.31■■□□□ 1.64
SLC3A2-213ENST00000539458 VGFO15240 615 aaPredicted RBP25.31■■□□□ 1.64
SLC3A2-213ENST00000539458 BCANQ96GW7 911 aa25.31■■□□□ 1.64
SLC3A2-213ENST00000539458 SCAF1Q9H7N4 1312 aaKnown RBP25.3■■□□□ 1.64
SLC3A2-213ENST00000539458 NRXN3Q9Y4C0 1643 aa25.3■■□□□ 1.64
SLC3A2-213ENST00000539458 ADAMTS13Q76LX8 1427 aa25.29■■□□□ 1.64
SLC3A2-213ENST00000539458 TOM1O60784 492 aa25.27■■□□□ 1.64
SLC3A2-213ENST00000539458 SLC26A8Q96RN1 970 aa25.27■■□□□ 1.64
SLC3A2-213ENST00000539458 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
SLC3A2-213ENST00000539458 MYOM2P54296 1465 aa25.26■■□□□ 1.63
SLC3A2-213ENST00000539458 CPS1P31327 1500 aa25.24■■□□□ 1.63
SLC3A2-213ENST00000539458 TBX22Q9Y458 520 aa25.24■■□□□ 1.63
SLC3A2-213ENST00000539458 PIP4K2BP78356 416 aa25.22■■□□□ 1.63
SLC3A2-213ENST00000539458 ADGRF5Q8IZF2 1346 aa25.21■■□□□ 1.63
SLC3A2-213ENST00000539458 NRXN1Q9ULB1 1477 aa25.21■■□□□ 1.63
SLC3A2-213ENST00000539458 STRCP1A6NGW2 1772 aa25.21■■□□□ 1.63
SLC3A2-213ENST00000539458 NWD1Q149M9 1564 aa25.2■■□□□ 1.62
SLC3A2-213ENST00000539458 SIN3AQ96ST3 1273 aa25.2■■□□□ 1.62
SLC3A2-213ENST00000539458 PIK3C2GO75747 1445 aa25.2■■□□□ 1.62
SLC3A2-213ENST00000539458 PIK3R4Q99570 1358 aa25.19■■□□□ 1.62
SLC3A2-213ENST00000539458 SETD1AO15047 1707 aaKnown RBP25.19■■□□□ 1.62
SLC3A2-213ENST00000539458 ALKQ9UM73 1620 aa25.19■■□□□ 1.62
SLC3A2-213ENST00000539458 STAC3Q96MF2 364 aa25.18■■□□□ 1.62
SLC3A2-213ENST00000539458 CHD2O14647 1828 aaKnown RBP25.17■■□□□ 1.62
SLC3A2-213ENST00000539458 DCAF11Q8TEB1 546 aa25.17■■□□□ 1.62
SLC3A2-213ENST00000539458 NEUROD1Q13562 356 aa25.16■■□□□ 1.62
SLC3A2-213ENST00000539458 KCNA6P17658 529 aa25.15■■□□□ 1.62
SLC3A2-213ENST00000539458 LAMC1P11047 1609 aa25.14■■□□□ 1.61
SLC3A2-213ENST00000539458 NKTRP30414 1462 aaKnown RBP25.14■■□□□ 1.61
SLC3A2-213ENST00000539458 HSPA1LP34931 641 aa25.13■■□□□ 1.61
SLC3A2-213ENST00000539458 METP08581 1390 aa25.13■■□□□ 1.61
SLC3A2-213ENST00000539458 CLSPNQ9HAW4 1339 aa25.12■■□□□ 1.61
SLC3A2-213ENST00000539458 KDM2AQ9Y2K7 1162 aa25.11■■□□□ 1.61
SLC3A2-213ENST00000539458 XRN1Q8IZH2 1706 aaKnown RBP25.11■■□□□ 1.61
SLC3A2-213ENST00000539458 LRRC7Q96NW7 1537 aa25.11■■□□□ 1.61
SLC3A2-213ENST00000539458 PTPRUQ92729 1446 aa25.11■■□□□ 1.61
SLC3A2-213ENST00000539458 L3MBTL2Q969R5 705 aa25.08■■□□□ 1.61
SLC3A2-213ENST00000539458 ASXL1Q8IXJ9 1541 aa25.07■■□□□ 1.6
SLC3A2-213ENST00000539458 C14orf93Q9H972 538 aaKnown RBP25.06■■□□□ 1.6
SLC3A2-213ENST00000539458 AMOTL2Q9Y2J4 779 aa25.06■■□□□ 1.6
SLC3A2-213ENST00000539458 TONSLQ96HA7 1378 aa25.05■■□□□ 1.6
SLC3A2-213ENST00000539458 CCER1Q8TC90 406 aaPredicted RBP25.04■■□□□ 1.6
SLC3A2-213ENST00000539458 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
SLC3A2-213ENST00000539458 CFAP70Q5T0N1 1121 aa25.03■■□□□ 1.6
SLC3A2-213ENST00000539458 XIRP1Q702N8 1843 aaKnown RBP25.02■■□□□ 1.6
SLC3A2-213ENST00000539458 PROSER2Q86WR7 435 aaPredicted RBP25.02■■□□□ 1.6
SLC3A2-213ENST00000539458 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
SLC3A2-213ENST00000539458 TMEM94Q12767 1356 aa25.01■■□□□ 1.59
SLC3A2-213ENST00000539458 KIAA1210Q9ULL0 1709 aa25■■□□□ 1.59
SLC3A2-213ENST00000539458 PTCH1Q13635 1447 aa25■■□□□ 1.59
SLC3A2-213ENST00000539458 ADGRB1O14514 1584 aa25■■□□□ 1.59
SLC3A2-213ENST00000539458 MED1Q15648 1581 aaPredicted RBP25■■□□□ 1.59
SLC3A2-213ENST00000539458 KNDC1Q76NI1 1749 aa24.99■■□□□ 1.59
SLC3A2-213ENST00000539458 LRPPRCP42704 1394 aaKnown RBP24.98■■□□□ 1.59
SLC3A2-213ENST00000539458 TECPR2O15040 1411 aa24.97■■□□□ 1.59
SLC3A2-213ENST00000539458 YTHDC2Q9H6S0 1430 aaKnown RBP24.97■■□□□ 1.59
SLC3A2-213ENST00000539458 NCOA3Q9Y6Q9 1424 aa24.97■■□□□ 1.59
SLC3A2-213ENST00000539458 TMEM132EQ6IEE7 984 aa24.97■■□□□ 1.59
SLC3A2-213ENST00000539458 ABCC11Q96J66 1382 aa24.94■■□□□ 1.58
SLC3A2-213ENST00000539458 ROBO2Q9HCK4 1378 aa24.93■■□□□ 1.58
SLC3A2-213ENST00000539458 RBM33Q96EV2 1170 aaKnown RBP24.93■■□□□ 1.58
SLC3A2-213ENST00000539458 TRPM1Q7Z4N2 1603 aa24.93■■□□□ 1.58
SLC3A2-213ENST00000539458 STK26Q9P289 416 aa24.91■■□□□ 1.58
SLC3A2-213ENST00000539458 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
SLC3A2-213ENST00000539458 DLC1Q96QB1 1528 aa24.9■■□□□ 1.58
SLC3A2-213ENST00000539458 MSH6P52701 1360 aa24.89■■□□□ 1.57
SLC3A2-213ENST00000539458 FAM135BQ49AJ0 1406 aa24.88■■□□□ 1.57
SLC3A2-213ENST00000539458 NALCNQ8IZF0 1738 aa24.87■■□□□ 1.57
SLC3A2-213ENST00000539458 C14orf37Q86TY3 774 aa24.87■■□□□ 1.57
SLC3A2-213ENST00000539458 SIRT1Q96EB6 747 aa24.87■■□□□ 1.57
SLC3A2-213ENST00000539458 ADGRL3Q9HAR2 1447 aa24.86■■□□□ 1.57
SLC3A2-213ENST00000539458 NBPF8Q3BBV2 869 aa24.86■■□□□ 1.57
SLC3A2-213ENST00000539458 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms