RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 NISCHQ9Y2I1 1504 aa41.8■■■■■ 4.28
SLC3A2-213ENST00000539458 CCDC180Q9P1Z9 1646 aa37.11■■■■□ 3.53
SLC3A2-213ENST00000539458 ABCC9O60706 1549 aa36.13■■■■□ 3.38
SLC3A2-213ENST00000539458 ZCCHC6Q5VYS8 1495 aaKnown RBP34.9■■■■□ 3.18
SLC3A2-213ENST00000539458 NACADO15069 1562 aa34.79■■■■□ 3.16
SLC3A2-213ENST00000539458 RB1CC1Q8TDY2 1594 aa34.78■■■■□ 3.16
SLC3A2-213ENST00000539458 DCAF8L2P0C7V8 631 aa34.72■■■■□ 3.15
SLC3A2-213ENST00000539458 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
SLC3A2-213ENST00000539458 DCAF1Q9Y4B6 1507 aa34.64■■■■□ 3.14
SLC3A2-213ENST00000539458 DNAJC5BQ9UF47 199 aa34.01■■■■□ 3.03
SLC3A2-213ENST00000539458 UNC13AQ9UPW8 1703 aa33.99■■■■□ 3.03
SLC3A2-213ENST00000539458 SCRIBQ14160 1630 aa33.83■■■■□ 3.01
SLC3A2-213ENST00000539458 BICRAQ9NZM4 1560 aa33.7■■■□□ 2.99
SLC3A2-213ENST00000539458 PABPN1Q86U42 306 aaKnown RBP eCLIP33.63■■■□□ 2.97
SLC3A2-213ENST00000539458 SHROOM4Q9ULL8 1493 aa33.43■■■□□ 2.94
SLC3A2-213ENST00000539458 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
SLC3A2-213ENST00000539458 CC2D2AQ9P2K1 1620 aa32.61■■■□□ 2.81
SLC3A2-213ENST00000539458 CECR2Q9BXF3 1484 aa32.6■■■□□ 2.81
SLC3A2-213ENST00000539458 BAZ1AQ9NRL2 1556 aaPredicted RBP32.41■■■□□ 2.78
SLC3A2-213ENST00000539458 SMARCA4P51532 1647 aa32.4■■■□□ 2.78
SLC3A2-213ENST00000539458 MROH2BQ7Z745 1585 aa32.21■■■□□ 2.75
SLC3A2-213ENST00000539458 SMARCA2P51531 1590 aa32.13■■■□□ 2.73
SLC3A2-213ENST00000539458 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
SLC3A2-213ENST00000539458 PEG3Q9GZU2 1588 aa32.1■■■□□ 2.73
SLC3A2-213ENST00000539458 NCAPD3P42695 1498 aa32.09■■■□□ 2.73
SLC3A2-213ENST00000539458 HMGXB3Q12766 1538 aa31.99■■■□□ 2.71
SLC3A2-213ENST00000539458 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
SLC3A2-213ENST00000539458 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
SLC3A2-213ENST00000539458 WIZO95785 1651 aa31.89■■■□□ 2.7
SLC3A2-213ENST00000539458 TOP2AP11388 1531 aaKnown RBP31.59■■■□□ 2.65
SLC3A2-213ENST00000539458 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
SLC3A2-213ENST00000539458 ERCC6Q03468 1493 aa31.32■■■□□ 2.6
SLC3A2-213ENST00000539458 CUX2O14529 1486 aa31.27■■■□□ 2.6
SLC3A2-213ENST00000539458 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
SLC3A2-213ENST00000539458 LAMC3Q9Y6N6 1575 aa31.22■■■□□ 2.59
SLC3A2-213ENST00000539458 NESP48681 1621 aa31.22■■■□□ 2.59
SLC3A2-213ENST00000539458 CCDC88BA6NC98 1476 aa31.18■■■□□ 2.58
SLC3A2-213ENST00000539458 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
SLC3A2-213ENST00000539458 CFTRP13569 1480 aa31.03■■■□□ 2.56
SLC3A2-213ENST00000539458 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
SLC3A2-213ENST00000539458 KIF21AQ7Z4S6 1674 aa30.89■■■□□ 2.54
SLC3A2-213ENST00000539458 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
SLC3A2-213ENST00000539458 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
SLC3A2-213ENST00000539458 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
SLC3A2-213ENST00000539458 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
SLC3A2-213ENST00000539458 MRC2Q9UBG0 1479 aa30.65■■■□□ 2.5
SLC3A2-213ENST00000539458 WDR62O43379 1518 aa30.57■■■□□ 2.48
SLC3A2-213ENST00000539458 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
SLC3A2-213ENST00000539458 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
SLC3A2-213ENST00000539458 TOPBP1Q92547 1522 aa30.35■■■□□ 2.45
SLC3A2-213ENST00000539458 DNMBPQ6XZF7 1577 aa30.35■■■□□ 2.45
SLC3A2-213ENST00000539458 CUX1P39880 1505 aa30.21■■■□□ 2.43
SLC3A2-213ENST00000539458 TRIM41Q8WV44 630 aa30.12■■■□□ 2.41
SLC3A2-213ENST00000539458 WRNQ14191 1432 aaPredicted RBP eCLIP30.1■■■□□ 2.41
SLC3A2-213ENST00000539458 POLA1P09884 1462 aaPredicted RBP30.1■■■□□ 2.41
SLC3A2-213ENST00000539458 IFT140Q96RY7 1462 aa30.1■■■□□ 2.41
SLC3A2-213ENST00000539458 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
SLC3A2-213ENST00000539458 BIVM-ERCC5R4GMW8 1640 aa30.05■■■□□ 2.4
SLC3A2-213ENST00000539458 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
SLC3A2-213ENST00000539458 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
SLC3A2-213ENST00000539458 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
SLC3A2-213ENST00000539458 SOGA1O94964 1423 aa29.96■■■□□ 2.39
SLC3A2-213ENST00000539458 RAD54L2Q9Y4B4 1467 aa29.94■■■□□ 2.38
SLC3A2-213ENST00000539458 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
SLC3A2-213ENST00000539458 OSCARQ8IYS5 282 aa29.89■■■□□ 2.38
SLC3A2-213ENST00000539458 EIF4G3O43432 1585 aaKnown RBP29.86■■■□□ 2.37
SLC3A2-213ENST00000539458 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
SLC3A2-213ENST00000539458 ABCA10Q8WWZ4 1543 aa29.8■■■□□ 2.36
SLC3A2-213ENST00000539458 AQRO60306 1485 aaKnown RBP eCLIP29.77■■■□□ 2.367e-7■■■■■ 27.5
SLC3A2-213ENST00000539458 TDRD9Q8NDG6 1382 aaKnown RBP29.75■■■□□ 2.35
SLC3A2-213ENST00000539458 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
SLC3A2-213ENST00000539458 GAPVD1Q14C86 1478 aa29.63■■■□□ 2.33
SLC3A2-213ENST00000539458 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
SLC3A2-213ENST00000539458 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
SLC3A2-213ENST00000539458 SNAPC4Q5SXM2 1469 aa29.53■■■□□ 2.32
SLC3A2-213ENST00000539458 MAGI1Q96QZ7 1491 aaPredicted RBP29.51■■■□□ 2.31
SLC3A2-213ENST00000539458 ERICH3Q5RHP9 1530 aa29.46■■■□□ 2.31
SLC3A2-213ENST00000539458 KIF27Q86VH2 1401 aa29.45■■■□□ 2.3
SLC3A2-213ENST00000539458 CHD1O14646 1710 aa29.42■■■□□ 2.3
SLC3A2-213ENST00000539458 RIMBP3CA6NJZ7 1639 aa29.39■■■□□ 2.3
SLC3A2-213ENST00000539458 RIMBP3BA6NNM3 1639 aa29.39■■■□□ 2.3
SLC3A2-213ENST00000539458 RIMBP3Q9UFD9 1639 aa29.39■■■□□ 2.3
SLC3A2-213ENST00000539458 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
SLC3A2-213ENST00000539458 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
SLC3A2-213ENST00000539458 FBLN2P98095 1184 aa29.32■■■□□ 2.28
SLC3A2-213ENST00000539458 CHIC1Q5VXU3 224 aa29.32■■■□□ 2.28
SLC3A2-213ENST00000539458 FHAD1B1AJZ9 1412 aa29.31■■■□□ 2.28
SLC3A2-213ENST00000539458 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
SLC3A2-213ENST00000539458 ARHGEF11O15085 1522 aa29.29■■■□□ 2.28
SLC3A2-213ENST00000539458 IGF1RP08069 1367 aa29.27■■■□□ 2.28
SLC3A2-213ENST00000539458 CUL7Q14999 1698 aa29.26■■■□□ 2.27
SLC3A2-213ENST00000539458 RUSC2Q8N2Y8 1516 aa29.24■■■□□ 2.27
SLC3A2-213ENST00000539458 GRIN2AQ12879 1464 aa29.23■■■□□ 2.27
SLC3A2-213ENST00000539458 CYB5RLQ6IPT4 315 aa29.19■■■□□ 2.26
SLC3A2-213ENST00000539458 CLASP1Q7Z460 1538 aa29.12■■■□□ 2.25
SLC3A2-213ENST00000539458 CARMIL1Q5VZK9 1371 aa29.11■■■□□ 2.25
SLC3A2-213ENST00000539458 NUP160Q12769 1436 aa29.09■■■□□ 2.25
SLC3A2-213ENST00000539458 EEA1Q15075 1411 aa29.08■■■□□ 2.25
SLC3A2-213ENST00000539458 CEP170Q5SW79 1584 aa29.08■■■□□ 2.25
SLC3A2-213ENST00000539458 TRHP20396 242 aaPredicted RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms