RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 LTKP29376 864 aa8.3□□□□□ -1.08
SNHG1-204ENST00000537068 LMTK2Q8IWU2 1503 aa8.29□□□□□ -1.08
SNHG1-204ENST00000537068 PIP4K2BP78356 416 aa8.29□□□□□ -1.08
SNHG1-204ENST00000537068 AMER1Q5JTC6 1135 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-204ENST00000537068 SCAF11Q99590 1463 aaKnown RBP8.29□□□□□ -1.08
SNHG1-204ENST00000537068 DAPK1P53355 1430 aa8.29□□□□□ -1.08
SNHG1-204ENST00000537068 TET3O43151 1660 aa8.28□□□□□ -1.08
SNHG1-204ENST00000537068 KIF15Q9NS87 1388 aa8.28□□□□□ -1.08
SNHG1-204ENST00000537068 ABCB7O75027 752 aa8.27□□□□□ -1.09
SNHG1-204ENST00000537068 POTEHQ6S545 545 aa8.27□□□□□ -1.09
SNHG1-204ENST00000537068 TXNDC2Q86VQ3 553 aa8.27□□□□□ -1.09
SNHG1-204ENST00000537068 TMEM2Q9UHN6 1383 aa8.26□□□□□ -1.09
SNHG1-204ENST00000537068 RRP7BPQ9NSQ0 103 aa8.26□□□□□ -1.09
SNHG1-204ENST00000537068 NOS1P29475 1434 aa8.26□□□□□ -1.09
SNHG1-204ENST00000537068 FGD6Q6ZV73 1430 aa8.26□□□□□ -1.09
SNHG1-204ENST00000537068 ADGRL2O95490 1459 aa8.26□□□□□ -1.09
SNHG1-204ENST00000537068 EFCAB6Q5THR3 1501 aa8.25□□□□□ -1.09
SNHG1-204ENST00000537068 IDI1Q13907 227 aa8.25□□□□□ -1.09
SNHG1-204ENST00000537068 CHD2O14647 1828 aaKnown RBP8.24□□□□□ -1.09
SNHG1-204ENST00000537068 MYO5BQ9ULV0 1848 aa8.24□□□□□ -1.09
SNHG1-204ENST00000537068 FAM135BQ49AJ0 1406 aa8.24□□□□□ -1.09
SNHG1-204ENST00000537068 EID1Q9Y6B2 187 aa8.24□□□□□ -1.09
SNHG1-204ENST00000537068 KANK1Q14678 1352 aa8.23□□□□□ -1.09
SNHG1-204ENST00000537068 ANKRD30AQ9BXX3 1397 aa8.23□□□□□ -1.09
SNHG1-204ENST00000537068 NWD1Q149M9 1564 aa8.23□□□□□ -1.09
SNHG1-204ENST00000537068 MKRN4PQ13434 485 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-204ENST00000537068 RPRD2Q5VT52 1461 aaKnown RBP8.23□□□□□ -1.09
SNHG1-204ENST00000537068 GCC2Q8IWJ2 1684 aa8.22□□□□□ -1.09
SNHG1-204ENST00000537068 KCNA6P17658 529 aa8.22□□□□□ -1.09
SNHG1-204ENST00000537068 SLC52A1Q9NWF4 448 aa8.22□□□□□ -1.09
SNHG1-204ENST00000537068 RGS17Q9UGC6 210 aaPredicted RBP8.22□□□□□ -1.09
SNHG1-204ENST00000537068 ADGRB3O60242 1522 aa8.22□□□□□ -1.09
SNHG1-204ENST00000537068 ROBO1Q9Y6N7 1651 aa8.21□□□□□ -1.09
SNHG1-204ENST00000537068 CHIC2Q9UKJ5 165 aa8.21□□□□□ -1.1
SNHG1-204ENST00000537068 TMEM131LA2VDJ0 1609 aa8.21□□□□□ -1.1
SNHG1-204ENST00000537068 ZFYVE9O95405 1425 aa8.2□□□□□ -1.1
SNHG1-204ENST00000537068 NKTRP30414 1462 aaKnown RBP8.2□□□□□ -1.1
SNHG1-204ENST00000537068 POLA2Q14181 598 aa8.2□□□□□ -1.1
SNHG1-204ENST00000537068 TMEM94Q12767 1356 aa8.2□□□□□ -1.1
SNHG1-204ENST00000537068 UNC13BO14795 1591 aa8.19□□□□□ -1.1
SNHG1-204ENST00000537068 E9PCH4 1651 aa8.19□□□□□ -1.1
SNHG1-204ENST00000537068 STAG3Q9UJ98 1225 aa8.19□□□□□ -1.1
SNHG1-204ENST00000537068 ANKRD50Q9ULJ7 1429 aa8.19□□□□□ -1.1
SNHG1-204ENST00000537068 SPDYE4A6NLX3 237 aa8.18□□□□□ -1.1
SNHG1-204ENST00000537068 SLC26A8Q96RN1 970 aa8.18□□□□□ -1.1
SNHG1-204ENST00000537068 NCOA3Q9Y6Q9 1424 aa8.18□□□□□ -1.1
SNHG1-204ENST00000537068 PROSER2Q86WR7 435 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-204ENST00000537068 RBM42Q9BTD8 480 aaKnown RBP8.17□□□□□ -1.1
SNHG1-204ENST00000537068 TBX22Q9Y458 520 aa8.17□□□□□ -1.1
SNHG1-204ENST00000537068 PLEKHG1Q9ULL1 1385 aa8.17□□□□□ -1.1
SNHG1-204ENST00000537068 IQGAP3Q86VI3 1631 aa8.17□□□□□ -1.1
SNHG1-204ENST00000537068 PHLPP1O60346 1717 aa8.16□□□□□ -1.1
SNHG1-204ENST00000537068 ADAMTS13Q76LX8 1427 aa8.15□□□□□ -1.1
SNHG1-204ENST00000537068 RIMS2Q9UQ26 1411 aa8.15□□□□□ -1.1
SNHG1-204ENST00000537068 ROCK1Q13464 1354 aa8.15□□□□□ -1.1
SNHG1-204ENST00000537068 HDGFP51858 240 aaKnown RBP8.15□□□□□ -1.1
SNHG1-204ENST00000537068 SLAIN2Q9P270 581 aa8.15□□□□□ -1.1
SNHG1-204ENST00000537068 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.15□□□□□ -1.11
SNHG1-204ENST00000537068 COL16A1Q07092 1604 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-204ENST00000537068 DIP2AQ14689 1571 aa8.14□□□□□ -1.11
SNHG1-204ENST00000537068 RBM33Q96EV2 1170 aaKnown RBP8.14□□□□□ -1.11
SNHG1-204ENST00000537068 MSH6P52701 1360 aa8.13□□□□□ -1.11
SNHG1-204ENST00000537068 PIK3R4Q99570 1358 aa8.13□□□□□ -1.11
SNHG1-204ENST00000537068 FAM50AQ14320 339 aaKnown RBP8.13□□□□□ -1.11
SNHG1-204ENST00000537068 POTEAQ6S8J7 498 aa8.13□□□□□ -1.11
SNHG1-204ENST00000537068 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.13□□□□□ -1.116e-32■□□□□ 8.9
SNHG1-204ENST00000537068 NRXN3Q9Y4C0 1643 aa8.12□□□□□ -1.11
SNHG1-204ENST00000537068 SHPRHQ149N8 1683 aa8.11□□□□□ -1.11
SNHG1-204ENST00000537068 AHDC1Q5TGY3 1603 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-204ENST00000537068 SPHKAPQ2M3C7 1700 aa8.11□□□□□ -1.11
SNHG1-204ENST00000537068 JCADQ9P266 1359 aa8.1□□□□□ -1.11
SNHG1-204ENST00000537068 TRPM2O94759 1503 aa8.1□□□□□ -1.11
SNHG1-204ENST00000537068 XRN1Q8IZH2 1706 aaKnown RBP8.1□□□□□ -1.11
SNHG1-204ENST00000537068 C19orf44Q9H6X5 657 aa8.1□□□□□ -1.11
SNHG1-204ENST00000537068 PTPRUQ92729 1446 aa8.1□□□□□ -1.11
SNHG1-204ENST00000537068 SETBP1Q9Y6X0 1596 aa8.1□□□□□ -1.11
SNHG1-204ENST00000537068 BCANQ96GW7 911 aa8.09□□□□□ -1.11
SNHG1-204ENST00000537068 SPATA31A6Q5VVP1 1343 aa8.08□□□□□ -1.12
SNHG1-204ENST00000537068 LRP6O75581 1613 aa8.08□□□□□ -1.12
SNHG1-204ENST00000537068 NHSL1Q5SYE7 1610 aa8.08□□□□□ -1.12
SNHG1-204ENST00000537068 PPP1R15AO75807 674 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-204ENST00000537068 CADPS2Q86UW7 1296 aa8.08□□□□□ -1.12
SNHG1-204ENST00000537068 DCCP43146 1447 aa8.08□□□□□ -1.12
SNHG1-204ENST00000537068 NUP155O75694 1391 aa8.08□□□□□ -1.12
SNHG1-204ENST00000537068 SETD1AO15047 1707 aaKnown RBP8.07□□□□□ -1.12
SNHG1-204ENST00000537068 AMOTL2Q9Y2J4 779 aa8.07□□□□□ -1.12
SNHG1-204ENST00000537068 KIF1BO60333 1816 aa8.07□□□□□ -1.12
SNHG1-204ENST00000537068 CHGAP10645 457 aaKnown RBP8.06□□□□□ -1.12
SNHG1-204ENST00000537068 NUTM2DQ5VT03 806 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-204ENST00000537068 LAMC1P11047 1609 aa8.06□□□□□ -1.12
SNHG1-204ENST00000537068 SETD5Q9C0A6 1442 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 NEXMIFQ5QGS0 1516 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 CLTCL1P53675 1640 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 SLC24A1O60721 1099 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 ATF3P18847 181 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 BRINP3Q76B58 766 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 PROM2Q8N271 834 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 FBXO3Q9UK99 471 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 NALCNQ8IZF0 1738 aa8.05□□□□□ -1.12
SNHG1-204ENST00000537068 MST1RQ04912 1400 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms