RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NGEFQ8N5V2 710 aa10.42□□□□□ -0.74
CTNND1-227ENST00000530748 NOL10Q9BSC4 688 aaKnown RBP10.42□□□□□ -0.74
CTNND1-227ENST00000530748 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
CTNND1-227ENST00000530748 TPM3P06753 285 aa10.42□□□□□ -0.74
CTNND1-227ENST00000530748 TPM2P07951 284 aa10.42□□□□□ -0.74
CTNND1-227ENST00000530748 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
CTNND1-227ENST00000530748 TPD52L1Q16890 204 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-227ENST00000530748 LRRC9Q6ZRR7 1453 aa10.42□□□□□ -0.74
CTNND1-227ENST00000530748 PLIN1O60240 522 aa10.42□□□□□ -0.74
CTNND1-227ENST00000530748 EXOC6Q8TAG9 804 aa10.41□□□□□ -0.74
CTNND1-227ENST00000530748 RUNDC1Q96C34 613 aa10.41□□□□□ -0.74
CTNND1-227ENST00000530748 BCL2L13Q9BXK5 485 aa10.41□□□□□ -0.74
CTNND1-227ENST00000530748 A0A0U1RQG5 324 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-227ENST00000530748 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
CTNND1-227ENST00000530748 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
CTNND1-227ENST00000530748 ELL2O00472 640 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-227ENST00000530748 API5Q9BZZ5 524 aaKnown RBP10.41□□□□□ -0.74
CTNND1-227ENST00000530748 DDX58O95786 925 aaKnown RBP10.4□□□□□ -0.74
CTNND1-227ENST00000530748 PDE4AP27815 886 aa10.4□□□□□ -0.74
CTNND1-227ENST00000530748 EIF2S2P20042 333 aaKnown RBP10.4□□□□□ -0.74
CTNND1-227ENST00000530748 RIPK4P57078 832 aa10.4□□□□□ -0.74
CTNND1-227ENST00000530748 C9orf78Q9NZ63 289 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-227ENST00000530748 IGF1RP08069 1367 aa10.4□□□□□ -0.74
CTNND1-227ENST00000530748 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.74
CTNND1-227ENST00000530748 STAC3Q96MF2 364 aa10.4□□□□□ -0.74
CTNND1-227ENST00000530748 ANO2Q9NQ90 1003 aa10.4□□□□□ -0.74
CTNND1-227ENST00000530748 PSME1Q06323 249 aa10.4□□□□□ -0.75
CTNND1-227ENST00000530748 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.75
CTNND1-227ENST00000530748 IFIT2P09913 472 aaKnown RBP10.39□□□□□ -0.75
CTNND1-227ENST00000530748 RRBP1Q9P2E9 1410 aaKnown RBP10.39□□□□□ -0.75
CTNND1-227ENST00000530748 NCOA2Q15596 1464 aa10.39□□□□□ -0.75
CTNND1-227ENST00000530748 CEP89Q96ST8 783 aa10.39□□□□□ -0.75
CTNND1-227ENST00000530748 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
CTNND1-227ENST00000530748 DZIP1LQ8IYY4 767 aaKnown RBP10.39□□□□□ -0.75
CTNND1-227ENST00000530748 REC8O95072 547 aa10.38□□□□□ -0.75
CTNND1-227ENST00000530748 TRIM29Q14134 588 aa10.38□□□□□ -0.75
CTNND1-227ENST00000530748 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
CTNND1-227ENST00000530748 APAF1O14727 1248 aa10.38□□□□□ -0.75
CTNND1-227ENST00000530748 MEX3CQ5U5Q3 659 aaKnown RBP10.38□□□□□ -0.75
CTNND1-227ENST00000530748 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
CTNND1-227ENST00000530748 GOLGA6L19H0YKK7 550 aa10.37□□□□□ -0.75
CTNND1-227ENST00000530748 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
CTNND1-227ENST00000530748 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
CTNND1-227ENST00000530748 GNAI1P63096 354 aa10.37□□□□□ -0.75
CTNND1-227ENST00000530748 TPM1P09493 284 aa10.36□□□□□ -0.75
CTNND1-227ENST00000530748 ZKSCAN1P17029 563 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-227ENST00000530748 PHF23Q9BUL5 403 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-227ENST00000530748 HECW1Q76N89 1606 aa10.36□□□□□ -0.75
CTNND1-227ENST00000530748 PES1O00541 588 aaKnown RBP10.36□□□□□ -0.75
CTNND1-227ENST00000530748 G3BP1Q13283 466 aaKnown RBP eCLIP10.36□□□□□ -0.758e-9■□□□□ 11.1
CTNND1-227ENST00000530748 CYB5RLQ6IPT4 315 aa10.36□□□□□ -0.75
CTNND1-227ENST00000530748 ARID3AQ99856 593 aa10.36□□□□□ -0.75
CTNND1-227ENST00000530748 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
CTNND1-227ENST00000530748 EFCAB5A4FU69 1503 aa10.36□□□□□ -0.75
CTNND1-227ENST00000530748 MCTP1Q6DN14 999 aa10.36□□□□□ -0.75
CTNND1-227ENST00000530748 DDX49Q9Y6V7 483 aaKnown RBP10.36□□□□□ -0.75
CTNND1-227ENST00000530748 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
CTNND1-227ENST00000530748 MSH5O43196 834 aa10.35□□□□□ -0.75
CTNND1-227ENST00000530748 RNF20Q5VTR2 975 aa10.35□□□□□ -0.75
CTNND1-227ENST00000530748 ANKRD50Q9ULJ7 1429 aa10.35□□□□□ -0.75
CTNND1-227ENST00000530748 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-227ENST00000530748 INTS3Q68E01 1043 aaKnown RBP10.35□□□□□ -0.75
CTNND1-227ENST00000530748 NECTIN2Q92692 538 aa10.35□□□□□ -0.75
CTNND1-227ENST00000530748 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
CTNND1-227ENST00000530748 HSP90AB4PQ58FF6 505 aa10.35□□□□□ -0.75
CTNND1-227ENST00000530748 CPLX2Q6PUV4 134 aaKnown RBP10.35□□□□□ -0.75
CTNND1-227ENST00000530748 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.752e-9■■■□□ 18.1
CTNND1-227ENST00000530748 TCEAL9Q9UHQ7 104 aa10.35□□□□□ -0.75
CTNND1-227ENST00000530748 AAMPQ13685 434 aa10.34□□□□□ -0.75
CTNND1-227ENST00000530748 CCDC47Q96A33 483 aaKnown RBP10.34□□□□□ -0.75
CTNND1-227ENST00000530748 PDE4CQ08493 712 aa10.34□□□□□ -0.75
CTNND1-227ENST00000530748 FAM69CQ0P6D2 419 aa10.34□□□□□ -0.75
CTNND1-227ENST00000530748 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
CTNND1-227ENST00000530748 BECN2A8MW95 431 aa10.34□□□□□ -0.75
CTNND1-227ENST00000530748 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
CTNND1-227ENST00000530748 NINLQ9Y2I6 1382 aa10.34□□□□□ -0.75
CTNND1-227ENST00000530748 ERC2O15083 957 aa10.34□□□□□ -0.75
CTNND1-227ENST00000530748 FKBP5Q13451 457 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-227ENST00000530748 KIF7Q2M1P5 1343 aa10.33□□□□□ -0.76
CTNND1-227ENST00000530748 SCAPERQ9BY12 1400 aa10.33□□□□□ -0.76
CTNND1-227ENST00000530748 ERICH2A1L162 156 aa10.33□□□□□ -0.76
CTNND1-227ENST00000530748 APPP05067 770 aa10.33□□□□□ -0.76
CTNND1-227ENST00000530748 ATF3P18847 181 aa10.32□□□□□ -0.76
CTNND1-227ENST00000530748 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
CTNND1-227ENST00000530748 CCDC70Q6NSX1 233 aa10.32□□□□□ -0.76
CTNND1-227ENST00000530748 NFXL1Q6ZNB6 911 aa10.32□□□□□ -0.76
CTNND1-227ENST00000530748 FBXW7Q969H0 707 aa10.32□□□□□ -0.76
CTNND1-227ENST00000530748 BRD4O60885 1362 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-227ENST00000530748 TRDNQ13061 729 aa10.32□□□□□ -0.76
CTNND1-227ENST00000530748 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
CTNND1-227ENST00000530748 PLEKHH2Q8IVE3 1493 aa10.32□□□□□ -0.76
CTNND1-227ENST00000530748 SMG6Q86US8 1419 aaKnown RBP10.31□□□□□ -0.76
CTNND1-227ENST00000530748 CPLX1O14810 134 aa10.31□□□□□ -0.76
CTNND1-227ENST00000530748 SYTL4Q96C24 671 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-227ENST00000530748 SLC4A3P48751 1232 aa10.31□□□□□ -0.76
CTNND1-227ENST00000530748 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
CTNND1-227ENST00000530748 ZNF644Q9H582 1327 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-227ENST00000530748 RAD21O60216 631 aa10.31□□□□□ -0.76
CTNND1-227ENST00000530748 GSE1Q14687 1217 aa10.31□□□□□ -0.76
CTNND1-227ENST00000530748 FOXD4L6Q3SYB3 417 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms