RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 SHANK2Q9UPX8 1470 aa8.51□□□□□ -1.05
CTNNA1-232ENST00000522013 RNF17Q9BXT8 1623 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-232ENST00000522013 PAK3O75914 559 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-232ENST00000522013 NLRP6P59044 892 aa8.51□□□□□ -1.05
CTNNA1-232ENST00000522013 PLCH2O75038 1416 aa8.51□□□□□ -1.05
CTNNA1-232ENST00000522013 ARHGAP5Q13017 1502 aa8.49□□□□□ -1.05
CTNNA1-232ENST00000522013 SOX12O15370 315 aa8.49□□□□□ -1.05
CTNNA1-232ENST00000522013 RANGAP1P46060 587 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-232ENST00000522013 CLCN6P51797 869 aa8.49□□□□□ -1.05
CTNNA1-232ENST00000522013 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
CTNNA1-232ENST00000522013 MS4A4AQ96JQ5 239 aa8.49□□□□□ -1.05
CTNNA1-232ENST00000522013 PHF12Q96QT6 1004 aa8.49□□□□□ -1.05
CTNNA1-232ENST00000522013 NEURL4Q96JN8 1562 aa8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 STRCP1A6NGW2 1772 aa8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 DNMT1P26358 1616 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 SRCAPQ6ZRS2 3230 aa8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 EFCAB2Q5VUJ9 269 aa8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 CDK13Q14004 1512 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 KIDINS220Q9ULH0 1771 aa8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 VWDEQ8N2E2 1590 aa8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 ZMYM3Q14202 1370 aa8.48□□□□□ -1.05
CTNNA1-232ENST00000522013 ITSN2Q9NZM3 1697 aa8.47□□□□□ -1.05
CTNNA1-232ENST00000522013 GALR2O43603 387 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-232ENST00000522013 ARHGEF1Q92888 912 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-232ENST00000522013 TIMELESSQ9UNS1 1208 aa8.47□□□□□ -1.05
CTNNA1-232ENST00000522013 CDC42BPBQ9Y5S2 1711 aa8.46□□□□□ -1.05
CTNNA1-232ENST00000522013 E2F4Q16254 413 aa8.46□□□□□ -1.06
CTNNA1-232ENST00000522013 SYNMO15061 1565 aa8.46□□□□□ -1.06
CTNNA1-232ENST00000522013 KIF14Q15058 1648 aa8.46□□□□□ -1.06
CTNNA1-232ENST00000522013 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
CTNNA1-232ENST00000522013 IQGAP1P46940 1657 aa8.45□□□□□ -1.06
CTNNA1-232ENST00000522013 A2ML1A8K2U0 1454 aa8.45□□□□□ -1.06
CTNNA1-232ENST00000522013 MLH3Q9UHC1 1453 aa8.45□□□□□ -1.06
CTNNA1-232ENST00000522013 TULP1O00294 542 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-232ENST00000522013 SEMA3EO15041 775 aa8.44□□□□□ -1.06
CTNNA1-232ENST00000522013 TRPC6Q9Y210 931 aa8.44□□□□□ -1.06
CTNNA1-232ENST00000522013 XIRP1Q702N8 1843 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-232ENST00000522013 PRXQ9BXM0 1461 aa8.43□□□□□ -1.06
CTNNA1-232ENST00000522013 TESPA1A2RU30 521 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-232ENST00000522013 TRIM52Q96A61 297 aa8.42□□□□□ -1.06
CTNNA1-232ENST00000522013 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
CTNNA1-232ENST00000522013 ABCC1P33527 1531 aa8.42□□□□□ -1.06
CTNNA1-232ENST00000522013 LRRC7Q96NW7 1537 aa8.42□□□□□ -1.06
CTNNA1-232ENST00000522013 ZC3H15Q8WU90 426 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-232ENST00000522013 LARP6Q9BRS8 491 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-232ENST00000522013 PREX2Q70Z35 1606 aa8.4□□□□□ -1.06
CTNNA1-232ENST00000522013 MFSD10Q14728 455 aa8.4□□□□□ -1.06
CTNNA1-232ENST00000522013 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
CTNNA1-232ENST00000522013 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
CTNNA1-232ENST00000522013 ATP1B4Q9UN42 357 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-232ENST00000522013 ROBO1Q9Y6N7 1651 aa8.4□□□□□ -1.07
CTNNA1-232ENST00000522013 NPHP4O75161 1426 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-232ENST00000522013 ANKLE2Q86XL3 938 aa8.39□□□□□ -1.07
CTNNA1-232ENST00000522013 TMEM106CQ9BVX2 250 aa8.39□□□□□ -1.07
CTNNA1-232ENST00000522013 PHLPP1O60346 1717 aa8.39□□□□□ -1.07
CTNNA1-232ENST00000522013 DEPDC5O75140 1603 aa8.39□□□□□ -1.07
CTNNA1-232ENST00000522013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNNA1-232ENST00000522013 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-232ENST00000522013 MS4A3Q96HJ5 214 aa8.38□□□□□ -1.07
CTNNA1-232ENST00000522013 GGT6Q6P531 493 aa8.37□□□□□ -1.07
CTNNA1-232ENST00000522013 SAMD9LQ8IVG5 1584 aa8.36□□□□□ -1.07
CTNNA1-232ENST00000522013 DCBLD2Q96PD2 775 aa8.36□□□□□ -1.07
CTNNA1-232ENST00000522013 CDC42BPAQ5VT25 1732 aa8.36□□□□□ -1.07
CTNNA1-232ENST00000522013 CLIP1P30622 1438 aa8.36□□□□□ -1.07
CTNNA1-232ENST00000522013 UGGT1Q9NYU2 1555 aa8.35□□□□□ -1.07
CTNNA1-232ENST00000522013 PDE4AP27815 886 aa8.35□□□□□ -1.07
CTNNA1-232ENST00000522013 LHX8Q68G74 356 aa8.35□□□□□ -1.07
CTNNA1-232ENST00000522013 DDX27Q96GQ7 796 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-232ENST00000522013 PLXNC1O60486 1568 aa8.35□□□□□ -1.07
CTNNA1-232ENST00000522013 CFAP65Q6ZU64 1925 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-232ENST00000522013 TNRQ92752 1358 aa8.35□□□□□ -1.07
CTNNA1-232ENST00000522013 LRRIQ1Q96JM4 1722 aa8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 ATP7AQ04656 1500 aa8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 FAM135AQ9P2D6 1515 aa8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 ZC3H13Q5T200 1668 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 ADGBQ8N7X0 1667 aa8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 MED14O60244 1454 aa8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 CAMK2BQ13554 666 aa8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 MEX3CQ5U5Q3 659 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 PELP1Q8IZL8 1130 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 SLC24A3Q9HC58 644 aa8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 CDK11AQ9UQ88 783 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-232ENST00000522013 SYCP2Q9BX26 1530 aa8.34□□□□□ -1.08
CTNNA1-232ENST00000522013 GOLGA2Q08379 1002 aa8.33□□□□□ -1.08
CTNNA1-232ENST00000522013 TROQ12816 1431 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-232ENST00000522013 A2MP01023 1474 aa8.32□□□□□ -1.08
CTNNA1-232ENST00000522013 INO80Q9ULG1 1556 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-232ENST00000522013 FAM135BQ49AJ0 1406 aa8.32□□□□□ -1.08
CTNNA1-232ENST00000522013 ARIH1Q9Y4X5 557 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-232ENST00000522013 SPAG9O60271 1321 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-232ENST00000522013 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-232ENST00000522013 ZNF772Q68DY9 489 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-232ENST00000522013 THEMISQ8N1K5 641 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-232ENST00000522013 ZNF777Q9ULD5 760 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-232ENST00000522013 SETBP1Q9Y6X0 1596 aa8.31□□□□□ -1.08
CTNNA1-232ENST00000522013 TTLL13PA6NNM8 815 aa8.3□□□□□ -1.08
CTNNA1-232ENST00000522013 RXRBP28702 533 aa8.3□□□□□ -1.08
CTNNA1-232ENST00000522013 MKRN3Q13064 507 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-232ENST00000522013 ASTLQ6HA08 431 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-232ENST00000522013 JCADQ9P266 1359 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms