RNA–Protein interactions for RNA: ENST00000521047.1

CLINT1-203, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-203ENST00000521047 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
CLINT1-203ENST00000521047 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
CLINT1-203ENST00000521047 IQGAP3Q86VI3 1631 aa12.1□□□□□ -0.47
CLINT1-203ENST00000521047 SLIT1O75093 1534 aa12.1□□□□□ -0.47
CLINT1-203ENST00000521047 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
CLINT1-203ENST00000521047 MYO5BQ9ULV0 1848 aa12.09□□□□□ -0.47
CLINT1-203ENST00000521047 IQSEC2Q5JU85 1478 aa12.07□□□□□ -0.48
CLINT1-203ENST00000521047 NPHP4O75161 1426 aaPredicted RBP12.06□□□□□ -0.48
CLINT1-203ENST00000521047 ALKQ9UM73 1620 aa12.06□□□□□ -0.48
CLINT1-203ENST00000521047 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
CLINT1-203ENST00000521047 KANK1Q14678 1352 aa12.05□□□□□ -0.48
CLINT1-203ENST00000521047 LTKP29376 864 aa12.05□□□□□ -0.48
CLINT1-203ENST00000521047 IDI1Q13907 227 aa12.05□□□□□ -0.48
CLINT1-203ENST00000521047 THEMISQ8N1K5 641 aaPredicted RBP12.05□□□□□ -0.48
CLINT1-203ENST00000521047 ADGRB3O60242 1522 aa12.05□□□□□ -0.48
CLINT1-203ENST00000521047 MKRN4PQ13434 485 aaPredicted RBP12.04□□□□□ -0.48
CLINT1-203ENST00000521047 TMEM131LA2VDJ0 1609 aa12.04□□□□□ -0.48
CLINT1-203ENST00000521047 NAIPQ13075 1403 aa12.03□□□□□ -0.48
CLINT1-203ENST00000521047 SCAF11Q99590 1463 aaKnown RBP12.03□□□□□ -0.48
CLINT1-203ENST00000521047 ITGAEP38570 1179 aa12.03□□□□□ -0.48
CLINT1-203ENST00000521047 ANKLE2Q86XL3 938 aa12.03□□□□□ -0.48
CLINT1-203ENST00000521047 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
CLINT1-203ENST00000521047 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.48
CLINT1-203ENST00000521047 TMEM2Q9UHN6 1383 aa12.02□□□□□ -0.49
CLINT1-203ENST00000521047 ZFYVE9O95405 1425 aa12.01□□□□□ -0.49
CLINT1-203ENST00000521047 CPS1P31327 1500 aa12.01□□□□□ -0.49
CLINT1-203ENST00000521047 SPHKAPQ2M3C7 1700 aa11.99□□□□□ -0.49
CLINT1-203ENST00000521047 LRRC7Q96NW7 1537 aa11.98□□□□□ -0.49
CLINT1-203ENST00000521047 NUP155O75694 1391 aa11.98□□□□□ -0.49
CLINT1-203ENST00000521047 HFM1A2PYH4 1435 aa11.97□□□□□ -0.49
CLINT1-203ENST00000521047 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.49
CLINT1-203ENST00000521047 SLC52A1Q9NWF4 448 aa11.96□□□□□ -0.49
CLINT1-203ENST00000521047 CLTCL1P53675 1640 aa11.95□□□□□ -0.5
CLINT1-203ENST00000521047 NWD1Q149M9 1564 aa11.95□□□□□ -0.5
CLINT1-203ENST00000521047 NRXN3Q9Y4C0 1643 aa11.93□□□□□ -0.5
CLINT1-203ENST00000521047 RIMS2Q9UQ26 1411 aa11.93□□□□□ -0.5
CLINT1-203ENST00000521047 CHD2O14647 1828 aaKnown RBP11.93□□□□□ -0.5
CLINT1-203ENST00000521047 ADAMTS13Q76LX8 1427 aa11.92□□□□□ -0.5
CLINT1-203ENST00000521047 TRPM2O94759 1503 aa11.91□□□□□ -0.5
CLINT1-203ENST00000521047 PLEKHG1Q9ULL1 1385 aa11.9□□□□□ -0.5
CLINT1-203ENST00000521047 UBAP1LF5GYI3 381 aa11.89□□□□□ -0.51
CLINT1-203ENST00000521047 SLC26A8Q96RN1 970 aa11.89□□□□□ -0.51
CLINT1-203ENST00000521047 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
CLINT1-203ENST00000521047 NEXMIFQ5QGS0 1516 aa11.89□□□□□ -0.51
CLINT1-203ENST00000521047 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
CLINT1-203ENST00000521047 SETD1AO15047 1707 aaKnown RBP11.87□□□□□ -0.51
CLINT1-203ENST00000521047 KIF1BO60333 1816 aa11.86□□□□□ -0.51
CLINT1-203ENST00000521047 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
CLINT1-203ENST00000521047 SETBP1Q9Y6X0 1596 aa11.86□□□□□ -0.51
CLINT1-203ENST00000521047 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
CLINT1-203ENST00000521047 DIP2AQ14689 1571 aa11.85□□□□□ -0.51
CLINT1-203ENST00000521047 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
CLINT1-203ENST00000521047 KCNA6P17658 529 aa11.85□□□□□ -0.51
CLINT1-203ENST00000521047 XRN1Q8IZH2 1706 aaKnown RBP11.85□□□□□ -0.51
CLINT1-203ENST00000521047 TMEM94Q12767 1356 aa11.84□□□□□ -0.51
CLINT1-203ENST00000521047 PPLO60437 1756 aa11.84□□□□□ -0.51
CLINT1-203ENST00000521047 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
CLINT1-203ENST00000521047 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
CLINT1-203ENST00000521047 HSPA1LP34931 641 aa11.82□□□□□ -0.52
CLINT1-203ENST00000521047 FKBP8Q14318 412 aa11.82□□□□□ -0.52
CLINT1-203ENST00000521047 TBX22Q9Y458 520 aa11.82□□□□□ -0.52
CLINT1-203ENST00000521047 IFT172Q9UG01 1749 aa11.82□□□□□ -0.52
CLINT1-203ENST00000521047 TOM1O60784 492 aa11.81□□□□□ -0.52
CLINT1-203ENST00000521047 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
CLINT1-203ENST00000521047 SPATA31E1Q6ZUB1 1445 aa11.79□□□□□ -0.52
CLINT1-203ENST00000521047 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLINT1-203ENST00000521047 TRIM52Q96A61 297 aa11.79□□□□□ -0.52
CLINT1-203ENST00000521047 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.79□□□□□ -0.52
CLINT1-203ENST00000521047 METP08581 1390 aa11.79□□□□□ -0.52
CLINT1-203ENST00000521047 PIK3R4Q99570 1358 aa11.79□□□□□ -0.52
CLINT1-203ENST00000521047 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
CLINT1-203ENST00000521047 ROBO1Q9Y6N7 1651 aa11.78□□□□□ -0.52
CLINT1-203ENST00000521047 PPP1R15AO75807 674 aaPredicted RBP11.77□□□□□ -0.53
CLINT1-203ENST00000521047 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.53
CLINT1-203ENST00000521047 MPHOSPH9Q99550 1183 aa11.77□□□□□ -0.53
CLINT1-203ENST00000521047 RAB3GAP2Q9H2M9 1393 aa11.77□□□□□ -0.53
CLINT1-203ENST00000521047 MED1Q15648 1581 aaPredicted RBP11.76□□□□□ -0.53
CLINT1-203ENST00000521047 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
CLINT1-203ENST00000521047 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
CLINT1-203ENST00000521047 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
CLINT1-203ENST00000521047 FAM135BQ49AJ0 1406 aa11.76□□□□□ -0.53
CLINT1-203ENST00000521047 NALCNQ8IZF0 1738 aa11.75□□□□□ -0.53
CLINT1-203ENST00000521047 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
CLINT1-203ENST00000521047 NCOA3Q9Y6Q9 1424 aa11.75□□□□□ -0.53
CLINT1-203ENST00000521047 ASXL1Q8IXJ9 1541 aa11.75□□□□□ -0.53
CLINT1-203ENST00000521047 BCANQ96GW7 911 aa11.74□□□□□ -0.53
CLINT1-203ENST00000521047 PRAG1Q86YV5 1406 aa11.74□□□□□ -0.53
CLINT1-203ENST00000521047 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
CLINT1-203ENST00000521047 AMOTL2Q9Y2J4 779 aa11.73□□□□□ -0.53
CLINT1-203ENST00000521047 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
CLINT1-203ENST00000521047 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
CLINT1-203ENST00000521047 SPDYE2Q495Y8 402 aa11.72□□□□□ -0.53
CLINT1-203ENST00000521047 ZNF326Q5BKZ1 582 aaKnown RBP11.72□□□□□ -0.53
CLINT1-203ENST00000521047 COL16A1Q07092 1604 aaPredicted RBP11.71□□□□□ -0.53
CLINT1-203ENST00000521047 CCDC144AA2RUR9 1427 aa11.7□□□□□ -0.54
CLINT1-203ENST00000521047 MSH6P52701 1360 aa11.7□□□□□ -0.54
CLINT1-203ENST00000521047 RPGRIP1LQ68CZ1 1315 aa11.7□□□□□ -0.54
CLINT1-203ENST00000521047 ADGRF5Q8IZF2 1346 aa11.7□□□□□ -0.54
CLINT1-203ENST00000521047 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
CLINT1-203ENST00000521047 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms