RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
PCDHGB4-201ENST00000519479 PDE4AP27815 886 aa14.42□□□□□ -0.1
PCDHGB4-201ENST00000519479 SMG6Q86US8 1419 aaKnown RBP14.42□□□□□ -0.1
PCDHGB4-201ENST00000519479 ERBINQ96RT1 1412 aa14.42□□□□□ -0.1
PCDHGB4-201ENST00000519479 SOX12O15370 315 aa14.41□□□□□ -0.1
PCDHGB4-201ENST00000519479 ZBTB7CA1YPR0 619 aa14.41□□□□□ -0.1
PCDHGB4-201ENST00000519479 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
PCDHGB4-201ENST00000519479 DHX29Q7Z478 1369 aaKnown RBP14.4□□□□□ -0.1
PCDHGB4-201ENST00000519479 ABCC10Q5T3U5 1492 aa14.4□□□□□ -0.1
PCDHGB4-201ENST00000519479 DEKP35659 375 aaKnown RBP14.39□□□□□ -0.11
PCDHGB4-201ENST00000519479 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
PCDHGB4-201ENST00000519479 CENPQQ7L2Z9 268 aaPredicted RBP14.39□□□□□ -0.11
PCDHGB4-201ENST00000519479 BCL2L13Q9BXK5 485 aa14.39□□□□□ -0.11
PCDHGB4-201ENST00000519479 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
PCDHGB4-201ENST00000519479 SMC4Q9NTJ3 1288 aa14.38□□□□□ -0.11
PCDHGB4-201ENST00000519479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHGB4-201ENST00000519479 SHANK2Q9UPX8 1470 aa14.38□□□□□ -0.11
PCDHGB4-201ENST00000519479 CLASP1Q7Z460 1538 aa14.38□□□□□ -0.11
PCDHGB4-201ENST00000519479 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
PCDHGB4-201ENST00000519479 ITPRIPQ8IWB1 547 aa14.37□□□□□ -0.11
PCDHGB4-201ENST00000519479 RTEL1-TNFRSF6BF6WH68 1400 aa14.37□□□□□ -0.11
PCDHGB4-201ENST00000519479 IPO8O15397 1037 aaKnown RBP14.37□□□□□ -0.11
PCDHGB4-201ENST00000519479 CHMP4BQ9H444 224 aaKnown RBP14.37□□□□□ -0.11
PCDHGB4-201ENST00000519479 SYCP2Q9BX26 1530 aa14.36□□□□□ -0.11
PCDHGB4-201ENST00000519479 NEO1Q92859 1461 aa14.36□□□□□ -0.11
PCDHGB4-201ENST00000519479 DUOX2Q9NRD8 1548 aa14.36□□□□□ -0.11
PCDHGB4-201ENST00000519479 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
PCDHGB4-201ENST00000519479 COG6Q9Y2V7 657 aa14.35□□□□□ -0.11
PCDHGB4-201ENST00000519479 NGEFQ8N5V2 710 aa14.35□□□□□ -0.11
PCDHGB4-201ENST00000519479 RPGRIP1LQ68CZ1 1315 aa14.34□□□□□ -0.11
PCDHGB4-201ENST00000519479 THEMISQ8N1K5 641 aaPredicted RBP14.33□□□□□ -0.12
PCDHGB4-201ENST00000519479 DNMT1P26358 1616 aaKnown RBP14.32□□□□□ -0.12
PCDHGB4-201ENST00000519479 SLC12A5Q9H2X9 1139 aa14.32□□□□□ -0.12
PCDHGB4-201ENST00000519479 PZPP20742 1482 aa14.32□□□□□ -0.12
PCDHGB4-201ENST00000519479 CABP2Q9NPB3 220 aa14.32□□□□□ -0.12
PCDHGB4-201ENST00000519479 A2MP01023 1474 aa14.32□□□□□ -0.12
PCDHGB4-201ENST00000519479 CFAP74Q9C0B2 1584 aa14.32□□□□□ -0.12
PCDHGB4-201ENST00000519479 RUNDC1Q96C34 613 aa14.32□□□□□ -0.12
PCDHGB4-201ENST00000519479 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
PCDHGB4-201ENST00000519479 MTHFSP49914 203 aa14.31□□□□□ -0.12
PCDHGB4-201ENST00000519479 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
PCDHGB4-201ENST00000519479 TRAPPC8Q9Y2L5 1435 aa14.31□□□□□ -0.12
PCDHGB4-201ENST00000519479 FAM161AQ3B820 660 aa14.3□□□□□ -0.12
PCDHGB4-201ENST00000519479 RALGAPBQ86X10 1494 aa14.3□□□□□ -0.12
PCDHGB4-201ENST00000519479 ANP32BQ92688 251 aaKnown RBP14.3□□□□□ -0.12
PCDHGB4-201ENST00000519479 GGNBP2Q9H3C7 697 aa14.29□□□□□ -0.12
PCDHGB4-201ENST00000519479 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
PCDHGB4-201ENST00000519479 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
PCDHGB4-201ENST00000519479 DISP3Q9P2K9 1392 aa14.28□□□□□ -0.12
PCDHGB4-201ENST00000519479 TCP11L2Q8N4U5 519 aa14.28□□□□□ -0.12
PCDHGB4-201ENST00000519479 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
PCDHGB4-201ENST00000519479 ZCCHC11Q5TAX3 1644 aaKnown RBP14.27□□□□□ -0.12
PCDHGB4-201ENST00000519479 ZKSCAN2Q63HK3 967 aa14.27□□□□□ -0.13
PCDHGB4-201ENST00000519479 SLC4A3P48751 1232 aa14.27□□□□□ -0.13
PCDHGB4-201ENST00000519479 LMOD2Q6P5Q4 547 aa14.27□□□□□ -0.13
PCDHGB4-201ENST00000519479 ERCC6L2Q5T890 1561 aa14.27□□□□□ -0.13
PCDHGB4-201ENST00000519479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.26□□□□□ -0.13
PCDHGB4-201ENST00000519479 SLKQ9H2G2 1235 aaPredicted RBP14.26□□□□□ -0.13
PCDHGB4-201ENST00000519479 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
PCDHGB4-201ENST00000519479 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
PCDHGB4-201ENST00000519479 PANK1Q8TE04 598 aa14.25□□□□□ -0.13
PCDHGB4-201ENST00000519479 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
PCDHGB4-201ENST00000519479 MYO5CQ9NQX4 1742 aa14.25□□□□□ -0.13
PCDHGB4-201ENST00000519479 FAM135AQ9P2D6 1515 aa14.25□□□□□ -0.13
PCDHGB4-201ENST00000519479 ELL2O00472 640 aaPredicted RBP14.25□□□□□ -0.13
PCDHGB4-201ENST00000519479 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
PCDHGB4-201ENST00000519479 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
PCDHGB4-201ENST00000519479 ADGRL2O95490 1459 aa14.24□□□□□ -0.13
PCDHGB4-201ENST00000519479 SHROOM2Q13796 1616 aa14.24□□□□□ -0.13
PCDHGB4-201ENST00000519479 RIPK4P57078 832 aa14.24□□□□□ -0.13
PCDHGB4-201ENST00000519479 HSCBQ8IWL3 235 aa14.24□□□□□ -0.13
PCDHGB4-201ENST00000519479 HSP90AB1P08238 724 aaKnown RBP14.24□□□□□ -0.13
PCDHGB4-201ENST00000519479 TXNDC2Q86VQ3 553 aa14.24□□□□□ -0.13
PCDHGB4-201ENST00000519479 BCAR3O75815 825 aa14.23□□□□□ -0.13
PCDHGB4-201ENST00000519479 ARHGEF5Q12774 1597 aa14.23□□□□□ -0.13
PCDHGB4-201ENST00000519479 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
PCDHGB4-201ENST00000519479 KDM6BO15054 1643 aa14.23□□□□□ -0.13
PCDHGB4-201ENST00000519479 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
PCDHGB4-201ENST00000519479 APBB1O00213 710 aa14.22□□□□□ -0.13
PCDHGB4-201ENST00000519479 MFAP1P55081 439 aaKnown RBP14.22□□□□□ -0.13
PCDHGB4-201ENST00000519479 COG3Q96JB2 828 aa14.22□□□□□ -0.13
PCDHGB4-201ENST00000519479 GOLGA6L22H0YM25 854 aa14.22□□□□□ -0.13
PCDHGB4-201ENST00000519479 LMOD3Q0VAK6 560 aa14.21□□□□□ -0.13
PCDHGB4-201ENST00000519479 PRAM1Q96QH2 718 aa14.21□□□□□ -0.13
PCDHGB4-201ENST00000519479 ATP7AQ04656 1500 aa14.21□□□□□ -0.13
PCDHGB4-201ENST00000519479 DZIP1LQ8IYY4 767 aaKnown RBP14.21□□□□□ -0.14
PCDHGB4-201ENST00000519479 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
PCDHGB4-201ENST00000519479 ATP10AO60312 1499 aa14.2□□□□□ -0.14
PCDHGB4-201ENST00000519479 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
PCDHGB4-201ENST00000519479 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
PCDHGB4-201ENST00000519479 TESK2Q96S53 571 aa14.2□□□□□ -0.14
PCDHGB4-201ENST00000519479 AEBP2Q6ZN18 517 aaPredicted RBP14.19□□□□□ -0.14
PCDHGB4-201ENST00000519479 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
PCDHGB4-201ENST00000519479 SCAF11Q99590 1463 aaKnown RBP14.19□□□□□ -0.14
PCDHGB4-201ENST00000519479 ARHGEF12Q9NZN5 1544 aa14.19□□□□□ -0.14
PCDHGB4-201ENST00000519479 SLFN5Q08AF3 891 aa14.18□□□□□ -0.14
PCDHGB4-201ENST00000519479 UHRF1BP1Q6BDS2 1440 aa14.17□□□□□ -0.14
PCDHGB4-201ENST00000519479 MSH5O43196 834 aa14.17□□□□□ -0.14
PCDHGB4-201ENST00000519479 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
PCDHGB4-201ENST00000519479 HMOX1P09601 288 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms