RNA–Protein interactions for RNA: ENST00000518985.1

PCM1-211, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-211ENST00000518985 MAP3K4Q9Y6R4 1608 aa11.3□□□□□ -0.6
PCM1-211ENST00000518985 WDR7Q9Y4E6 1490 aa11.3□□□□□ -0.6
PCM1-211ENST00000518985 UBTFP17480 764 aaKnown RBP11.29□□□□□ -0.6
PCM1-211ENST00000518985 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
PCM1-211ENST00000518985 TBC1D12O60347 775 aa11.28□□□□□ -0.6
PCM1-211ENST00000518985 PLEKHG3A1L390 1219 aa11.27□□□□□ -0.61
PCM1-211ENST00000518985 DDX12PQ92771 950 aa11.27□□□□□ -0.61
PCM1-211ENST00000518985 LRRIQ1Q96JM4 1722 aa11.26□□□□□ -0.61
PCM1-211ENST00000518985 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
PCM1-211ENST00000518985 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
PCM1-211ENST00000518985 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
PCM1-211ENST00000518985 EVI5O60447 810 aa11.25□□□□□ -0.61
PCM1-211ENST00000518985 FECHP22830 423 aa11.25□□□□□ -0.61
PCM1-211ENST00000518985 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
PCM1-211ENST00000518985 PTGDRQ13258 359 aa11.24□□□□□ -0.61
PCM1-211ENST00000518985 COL17A1Q9UMD9 1497 aaPredicted RBP11.24□□□□□ -0.61
PCM1-211ENST00000518985 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
PCM1-211ENST00000518985 CFAP43Q8NDM7 1665 aa11.23□□□□□ -0.61
PCM1-211ENST00000518985 CDK13Q14004 1512 aaKnown RBP11.22□□□□□ -0.61
PCM1-211ENST00000518985 PTCD2Q8WV60 388 aaKnown RBP11.22□□□□□ -0.61
PCM1-211ENST00000518985 ABCA9Q8IUA7 1624 aa11.21□□□□□ -0.61
PCM1-211ENST00000518985 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
PCM1-211ENST00000518985 GOPCQ9HD26 462 aa11.21□□□□□ -0.61
PCM1-211ENST00000518985 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
PCM1-211ENST00000518985 KDM6BO15054 1643 aa11.2□□□□□ -0.62
PCM1-211ENST00000518985 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
PCM1-211ENST00000518985 FMN1Q68DA7 1419 aa11.19□□□□□ -0.62
PCM1-211ENST00000518985 SEC24BO95487 1268 aa11.19□□□□□ -0.62
PCM1-211ENST00000518985 KCNH8Q96L42 1107 aa11.19□□□□□ -0.62
PCM1-211ENST00000518985 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
PCM1-211ENST00000518985 HECW1Q76N89 1606 aa11.18□□□□□ -0.62
PCM1-211ENST00000518985 SLC34A2O95436 690 aa11.18□□□□□ -0.62
PCM1-211ENST00000518985 TTLL12Q14166 644 aaPredicted RBP11.18□□□□□ -0.62
PCM1-211ENST00000518985 PCF11O94913 1555 aaKnown RBP11.18□□□□□ -0.62
PCM1-211ENST00000518985 CLIP1P30622 1438 aa11.18□□□□□ -0.62
PCM1-211ENST00000518985 CD109Q6YHK3 1445 aa11.18□□□□□ -0.62
PCM1-211ENST00000518985 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
PCM1-211ENST00000518985 LOC105371045A0A1W2PR82 267 aa11.16□□□□□ -0.62
PCM1-211ENST00000518985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.15□□□□□ -0.62
PCM1-211ENST00000518985 EN1Q05925 392 aaPredicted RBP11.15□□□□□ -0.62
PCM1-211ENST00000518985 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
PCM1-211ENST00000518985 CASKIN1Q8WXD9 1431 aa11.15□□□□□ -0.62
PCM1-211ENST00000518985 TTC37Q6PGP7 1564 aa11.15□□□□□ -0.62
PCM1-211ENST00000518985 TEX14Q8IWB6 1497 aa11.14□□□□□ -0.63
PCM1-211ENST00000518985 PHF14O94880 888 aa11.14□□□□□ -0.63
PCM1-211ENST00000518985 SLC39A7Q92504 469 aa11.14□□□□□ -0.63
PCM1-211ENST00000518985 EPAS1Q99814 870 aa11.14□□□□□ -0.63
PCM1-211ENST00000518985 CEP162Q5TB80 1403 aa11.13□□□□□ -0.63
PCM1-211ENST00000518985 GABBR2O75899 941 aa11.13□□□□□ -0.63
PCM1-211ENST00000518985 MS4A1P11836 297 aa11.13□□□□□ -0.63
PCM1-211ENST00000518985 FLIIQ13045 1269 aa11.13□□□□□ -0.63
PCM1-211ENST00000518985 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
PCM1-211ENST00000518985 KIF14Q15058 1648 aa11.13□□□□□ -0.63
PCM1-211ENST00000518985 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
PCM1-211ENST00000518985 ARAP3Q8WWN8 1544 aa11.11□□□□□ -0.63
PCM1-211ENST00000518985 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
PCM1-211ENST00000518985 C3orf67Q6ZVT6 689 aa11.11□□□□□ -0.63
PCM1-211ENST00000518985 TMUB1Q9BVT8 246 aa11.11□□□□□ -0.63
PCM1-211ENST00000518985 CDHR5Q9HBB8 845 aa11.11□□□□□ -0.63
PCM1-211ENST00000518985 FYCO1Q9BQS8 1478 aa11.11□□□□□ -0.63
PCM1-211ENST00000518985 C7P10643 843 aa11.1□□□□□ -0.63
PCM1-211ENST00000518985 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
PCM1-211ENST00000518985 REPIN1Q9BWE0 567 aaKnown RBP11.1□□□□□ -0.63
PCM1-211ENST00000518985 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
PCM1-211ENST00000518985 FRMPD1Q5SYB0 1578 aa11.09□□□□□ -0.63
PCM1-211ENST00000518985 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
PCM1-211ENST00000518985 NEO1Q92859 1461 aa11.08□□□□□ -0.64
PCM1-211ENST00000518985 CLCN1P35523 988 aa11.08□□□□□ -0.64
PCM1-211ENST00000518985 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
PCM1-211ENST00000518985 MAP3K7O43318 606 aa11.07□□□□□ -0.64
PCM1-211ENST00000518985 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
PCM1-211ENST00000518985 PCMTD1Q96MG8 357 aaPredicted RBP11.06□□□□□ -0.64
PCM1-211ENST00000518985 GPCPD1Q9NPB8 672 aa11.06□□□□□ -0.64
PCM1-211ENST00000518985 PCDHGA10Q9Y5H3 936 aa11.06□□□□□ -0.64
PCM1-211ENST00000518985 PLCH2O75038 1416 aa11.06□□□□□ -0.64
PCM1-211ENST00000518985 RICTORQ6R327 1708 aa11.06□□□□□ -0.64
PCM1-211ENST00000518985 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
PCM1-211ENST00000518985 SH3D19Q5HYK7 790 aa11.05□□□□□ -0.64
PCM1-211ENST00000518985 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
PCM1-211ENST00000518985 SLAIN1Q8ND83 568 aa11.05□□□□□ -0.64
PCM1-211ENST00000518985 MYO5CQ9NQX4 1742 aa11.05□□□□□ -0.64
PCM1-211ENST00000518985 PHLDB1Q86UU1 1377 aa11.04□□□□□ -0.64
PCM1-211ENST00000518985 AKNAQ7Z591 1439 aa11.04□□□□□ -0.64
PCM1-211ENST00000518985 METRNQ9UJH8 293 aa11.04□□□□□ -0.64
PCM1-211ENST00000518985 FANCAO15360 1455 aa11.04□□□□□ -0.64
PCM1-211ENST00000518985 CDC42BPAQ5VT25 1732 aa11.04□□□□□ -0.64
PCM1-211ENST00000518985 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
PCM1-211ENST00000518985 RAPGEF3O95398 923 aa11.03□□□□□ -0.64
PCM1-211ENST00000518985 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
PCM1-211ENST00000518985 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
PCM1-211ENST00000518985 PHOX2BQ99453 314 aa11.03□□□□□ -0.64
PCM1-211ENST00000518985 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
PCM1-211ENST00000518985 RBM33Q96EV2 1170 aaKnown RBP11.02□□□□□ -0.65
PCM1-211ENST00000518985 PCDHGA4Q9Y5G9 962 aa11.02□□□□□ -0.65
PCM1-211ENST00000518985 PREX2Q70Z35 1606 aa11.02□□□□□ -0.65
PCM1-211ENST00000518985 C1orf115Q9H7X2 142 aa11.01□□□□□ -0.65
PCM1-211ENST00000518985 CDK11AQ9UQ88 783 aaPredicted RBP11.01□□□□□ -0.65
PCM1-211ENST00000518985 CFAP74Q9C0B2 1584 aa11.01□□□□□ -0.65
PCM1-211ENST00000518985 SIGLEC1Q9BZZ2 1709 aa11□□□□□ -0.65
PCM1-211ENST00000518985 VPS8Q8N3P4 1428 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms