RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 PHF14O94880 888 aa13.49□□□□□ -0.25
NPM1-204ENST00000517671 LSM11P83369 360 aaKnown RBP eCLIP13.49□□□□□ -0.256e-8■■■■■ 28.5
NPM1-204ENST00000517671 FAM9AQ8IZU1 332 aaPredicted RBP13.49□□□□□ -0.25
NPM1-204ENST00000517671 EPAS1Q99814 870 aa13.49□□□□□ -0.25
NPM1-204ENST00000517671 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
NPM1-204ENST00000517671 TTBK1Q5TCY1 1321 aaPredicted RBP13.47□□□□□ -0.25
NPM1-204ENST00000517671 FOSBP53539 338 aa13.47□□□□□ -0.25
NPM1-204ENST00000517671 BCANQ96GW7 911 aa13.47□□□□□ -0.25
NPM1-204ENST00000517671 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.25
NPM1-204ENST00000517671 ZDHHC16Q969W1 377 aa13.45□□□□□ -0.26
NPM1-204ENST00000517671 PCDHGA10Q9Y5H3 936 aa13.45□□□□□ -0.26
NPM1-204ENST00000517671 TESPA1A2RU30 521 aaPredicted RBP13.44□□□□□ -0.26
NPM1-204ENST00000517671 MLLT3P42568 568 aaPredicted RBP13.44□□□□□ -0.26
NPM1-204ENST00000517671 FBXW7Q969H0 707 aa13.44□□□□□ -0.26
NPM1-204ENST00000517671 PBX2P40425 430 aa13.42□□□□□ -0.26
NPM1-204ENST00000517671 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
NPM1-204ENST00000517671 KDM5BQ9UGL1 1544 aa13.41□□□□□ -0.26
NPM1-204ENST00000517671 IQGAP2Q13576 1575 aa13.41□□□□□ -0.26
NPM1-204ENST00000517671 EPRSP07814 1512 aaKnown RBP13.4□□□□□ -0.26
NPM1-204ENST00000517671 ADGRL1O94910 1474 aa13.4□□□□□ -0.26
NPM1-204ENST00000517671 RBM33Q96EV2 1170 aaKnown RBP13.39□□□□□ -0.27
NPM1-204ENST00000517671 POTEEQ6S8J3 1075 aa13.39□□□□□ -0.27
NPM1-204ENST00000517671 TSPOAP1O95153 1857 aa13.38□□□□□ -0.27
NPM1-204ENST00000517671 MAP3K7O43318 606 aa13.38□□□□□ -0.27
NPM1-204ENST00000517671 OSBPP22059 807 aa13.38□□□□□ -0.27
NPM1-204ENST00000517671 AXIN2Q9Y2T1 843 aa13.38□□□□□ -0.27
NPM1-204ENST00000517671 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
NPM1-204ENST00000517671 DISP1Q96F81 1524 aa13.36□□□□□ -0.27
NPM1-204ENST00000517671 UGGT2Q9NYU1 1516 aa13.36□□□□□ -0.27
NPM1-204ENST00000517671 EN1Q05925 392 aaPredicted RBP13.36□□□□□ -0.27
NPM1-204ENST00000517671 ADAM33Q9BZ11 813 aa13.36□□□□□ -0.27
NPM1-204ENST00000517671 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
NPM1-204ENST00000517671 PTPREP23469 700 aa13.35□□□□□ -0.27
NPM1-204ENST00000517671 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
NPM1-204ENST00000517671 COL17A1Q9UMD9 1497 aaPredicted RBP13.33□□□□□ -0.27
NPM1-204ENST00000517671 WDR7Q9Y4E6 1490 aa13.33□□□□□ -0.27
NPM1-204ENST00000517671 CD109Q6YHK3 1445 aa13.33□□□□□ -0.28
NPM1-204ENST00000517671 ARHGAP33O14559 1287 aa13.33□□□□□ -0.28
NPM1-204ENST00000517671 GOLGA3Q08378 1498 aa13.33□□□□□ -0.28
NPM1-204ENST00000517671 C6orf132Q5T0Z8 1188 aa13.32□□□□□ -0.28
NPM1-204ENST00000517671 MAGI3Q5TCQ9 1506 aa13.31□□□□□ -0.28
NPM1-204ENST00000517671 MAP3K4Q9Y6R4 1608 aa13.31□□□□□ -0.28
NPM1-204ENST00000517671 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
NPM1-204ENST00000517671 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
NPM1-204ENST00000517671 PPRC1Q5VV67 1664 aaKnown RBP13.29□□□□□ -0.28
NPM1-204ENST00000517671 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
NPM1-204ENST00000517671 TSR1Q2NL82 804 aaKnown RBP13.27□□□□□ -0.29
NPM1-204ENST00000517671 FBXO41Q8TF61 875 aa13.27□□□□□ -0.29
NPM1-204ENST00000517671 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
NPM1-204ENST00000517671 PSEN2P49810 448 aa13.26□□□□□ -0.29
NPM1-204ENST00000517671 ADGRD1Q6QNK2 874 aa13.26□□□□□ -0.29
NPM1-204ENST00000517671 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
NPM1-204ENST00000517671 HCSTQ9UBK5 93 aa13.26□□□□□ -0.29
NPM1-204ENST00000517671 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
NPM1-204ENST00000517671 KIAA0556O60303 1618 aa13.24□□□□□ -0.29
NPM1-204ENST00000517671 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
NPM1-204ENST00000517671 HECW2Q9P2P5 1572 aa13.24□□□□□ -0.29
NPM1-204ENST00000517671 PLA2G2EQ9NZK7 142 aa13.24□□□□□ -0.29
NPM1-204ENST00000517671 PPP1R3GB7ZBB8 358 aa13.23□□□□□ -0.29
NPM1-204ENST00000517671 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
NPM1-204ENST00000517671 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
NPM1-204ENST00000517671 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
NPM1-204ENST00000517671 FCHSD2O94868 740 aa13.2□□□□□ -0.3
NPM1-204ENST00000517671 COL9A1P20849 921 aa13.19□□□□□ -0.3
NPM1-204ENST00000517671 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
NPM1-204ENST00000517671 CFAP43Q8NDM7 1665 aa13.19□□□□□ -0.3
NPM1-204ENST00000517671 DMRTA1Q5VZB9 504 aa13.18□□□□□ -0.3
NPM1-204ENST00000517671 TK2O00142 265 aa13.17□□□□□ -0.3
NPM1-204ENST00000517671 ABCA8O94911 1581 aa13.17□□□□□ -0.3
NPM1-204ENST00000517671 PTGDRQ13258 359 aa13.15□□□□□ -0.3
NPM1-204ENST00000517671 ZBED2Q9BTP6 218 aa13.15□□□□□ -0.3
NPM1-204ENST00000517671 SLC4A5Q9BY07 1137 aa13.15□□□□□ -0.3
NPM1-204ENST00000517671 HRO43593 1189 aa13.14□□□□□ -0.31
NPM1-204ENST00000517671 NPDC1Q9NQX5 325 aaPredicted RBP13.14□□□□□ -0.31
NPM1-204ENST00000517671 NEO1Q92859 1461 aa13.14□□□□□ -0.31
NPM1-204ENST00000517671 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
NPM1-204ENST00000517671 PRSS12P56730 875 aa13.13□□□□□ -0.31
NPM1-204ENST00000517671 STAC3Q96MF2 364 aa13.13□□□□□ -0.31
NPM1-204ENST00000517671 PRXQ9BXM0 1461 aa13.13□□□□□ -0.31
NPM1-204ENST00000517671 ATP10BO94823 1461 aa13.13□□□□□ -0.31
NPM1-204ENST00000517671 HIC1Q14526 733 aa13.13□□□□□ -0.31
NPM1-204ENST00000517671 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
NPM1-204ENST00000517671 PTPRMP28827 1452 aa13.12□□□□□ -0.31
NPM1-204ENST00000517671 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
NPM1-204ENST00000517671 ONECUT3O60422 494 aaPredicted RBP13.12□□□□□ -0.31
NPM1-204ENST00000517671 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
NPM1-204ENST00000517671 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
NPM1-204ENST00000517671 RAPGEF3O95398 923 aa13.11□□□□□ -0.31
NPM1-204ENST00000517671 PROX2Q3B8N5 592 aa13.11□□□□□ -0.31
NPM1-204ENST00000517671 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
NPM1-204ENST00000517671 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
NPM1-204ENST00000517671 GNPATO15228 680 aa13.09□□□□□ -0.31
NPM1-204ENST00000517671 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
NPM1-204ENST00000517671 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
NPM1-204ENST00000517671 RABGEF1Q9UJ41 708 aa13.07□□□□□ -0.32
NPM1-204ENST00000517671 CTTNBP2Q8WZ74 1663 aa13.07□□□□□ -0.32
NPM1-204ENST00000517671 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
NPM1-204ENST00000517671 ZC3H15Q8WU90 426 aaKnown RBP13.06□□□□□ -0.32
NPM1-204ENST00000517671 KCTD12Q96CX2 325 aaKnown RBP13.06□□□□□ -0.32
NPM1-204ENST00000517671 NBPF3Q9H094 633 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms