RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 KIAA0586Q9BVV6 1533 aa15.16■□□□□ 0.02
PCDHGA6-201ENST00000517434 FAM43AQ8N2R8 423 aa15.16■□□□□ 0.02
PCDHGA6-201ENST00000517434 AFAP1Q8N556 730 aa15.16■□□□□ 0.02
PCDHGA6-201ENST00000517434 CHMP3Q9Y3E7 222 aa15.16■□□□□ 0.02
PCDHGA6-201ENST00000517434 RAPGEF4Q8WZA2 1011 aa15.16■□□□□ 0.02
PCDHGA6-201ENST00000517434 SETQ01105 290 aaPredicted RBP15.15■□□□□ 0.02
PCDHGA6-201ENST00000517434 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
PCDHGA6-201ENST00000517434 LRRC9Q6ZRR7 1453 aa15.15■□□□□ 0.02
PCDHGA6-201ENST00000517434 MSH5O43196 834 aa15.15■□□□□ 0.02
PCDHGA6-201ENST00000517434 CSPP1Q1MSJ5 1256 aa15.15■□□□□ 0.02
PCDHGA6-201ENST00000517434 PHF14O94880 888 aa15.14■□□□□ 0.01
PCDHGA6-201ENST00000517434 ST20-MTHFSA0A0A6YYL1 179 aa15.14■□□□□ 0.01
PCDHGA6-201ENST00000517434 NEXNQ0ZGT2 675 aa15.13■□□□□ 0.01
PCDHGA6-201ENST00000517434 HTATSF1O43719 755 aaKnown RBP15.13■□□□□ 0.01
PCDHGA6-201ENST00000517434 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA6-201ENST00000517434 FRAT2O75474 233 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA6-201ENST00000517434 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
PCDHGA6-201ENST00000517434 PMFBP1Q8TBY8 1022 aa15.11■□□□□ 0.01
PCDHGA6-201ENST00000517434 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
PCDHGA6-201ENST00000517434 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA6-201ENST00000517434 HFM1A2PYH4 1435 aa15.11■□□□□ 0.01
PCDHGA6-201ENST00000517434 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
PCDHGA6-201ENST00000517434 FAM161AQ3B820 660 aa15.11■□□□□ 0.01
PCDHGA6-201ENST00000517434 MFAP1P55081 439 aaKnown RBP15.1■□□□□ 0.01
PCDHGA6-201ENST00000517434 SF3B2Q13435 895 aaKnown RBP15.1■□□□□ 0.01
PCDHGA6-201ENST00000517434 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA6-201ENST00000517434 DDX58O95786 925 aaKnown RBP15.09■□□□□ 0.01
PCDHGA6-201ENST00000517434 TPM2P07951 284 aa15.09■□□□□ 0.01
PCDHGA6-201ENST00000517434 NCOA2Q15596 1464 aa15.09■□□□□ 0.01
PCDHGA6-201ENST00000517434 PANK3Q9H999 370 aa15.09■□□□□ 0.01
PCDHGA6-201ENST00000517434 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
PCDHGA6-201ENST00000517434 DDX49Q9Y6V7 483 aaKnown RBP15.09■□□□□ 0.01
PCDHGA6-201ENST00000517434 MYBBP1AQ9BQG0 1328 aaKnown RBP15.08■□□□□ 0.01
PCDHGA6-201ENST00000517434 DIAPH1O60610 1272 aaKnown RBP15.08■□□□□ 0.01
PCDHGA6-201ENST00000517434 HSP90B1P14625 803 aaKnown RBP15.08■□□□□ 0
PCDHGA6-201ENST00000517434 GNL2Q13823 731 aaKnown RBP15.08■□□□□ 0
PCDHGA6-201ENST00000517434 RPGRIP1LQ68CZ1 1315 aa15.08■□□□□ 0
PCDHGA6-201ENST00000517434 SLC4A3P48751 1232 aa15.08■□□□□ 0
PCDHGA6-201ENST00000517434 CHMP4CQ96CF2 233 aa15.08■□□□□ 0
PCDHGA6-201ENST00000517434 TPM4P67936 248 aa15.07■□□□□ 0
PCDHGA6-201ENST00000517434 IL27Q8NEV9 243 aa15.07■□□□□ 0
PCDHGA6-201ENST00000517434 SCAPERQ9BY12 1400 aa15.07■□□□□ 0
PCDHGA6-201ENST00000517434 CCDC34Q96HJ3 373 aa15.07■□□□□ 0
PCDHGA6-201ENST00000517434 USP47Q96K76 1375 aa15.06■□□□□ 0
PCDHGA6-201ENST00000517434 NOC3LQ8WTT2 800 aaKnown RBP15.06■□□□□ 0
PCDHGA6-201ENST00000517434 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
PCDHGA6-201ENST00000517434 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
PCDHGA6-201ENST00000517434 TULP1O00294 542 aaPredicted RBP15.05■□□□□ 0
PCDHGA6-201ENST00000517434 SLC4A10Q6U841 1118 aa15.05■□□□□ 0
PCDHGA6-201ENST00000517434 CALRP27797 417 aaKnown RBP15.05■□□□□ 0
PCDHGA6-201ENST00000517434 ABCA10Q8WWZ4 1543 aa15.05■□□□□ -0
PCDHGA6-201ENST00000517434 GPS2Q13227 327 aa15.05■□□□□ -0
PCDHGA6-201ENST00000517434 TEX35Q5T0J7 233 aa15.05■□□□□ -0
PCDHGA6-201ENST00000517434 NOL10Q9BSC4 688 aaKnown RBP15.05■□□□□ -0
PCDHGA6-201ENST00000517434 NLRP2Q9NX02 1062 aa15.04■□□□□ -0
PCDHGA6-201ENST00000517434 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
PCDHGA6-201ENST00000517434 NLRP6P59044 892 aa15.04■□□□□ -0
PCDHGA6-201ENST00000517434 NFKBIBQ15653 356 aa15.04■□□□□ -0
PCDHGA6-201ENST00000517434 CENPQQ7L2Z9 268 aaPredicted RBP15.04■□□□□ -0
PCDHGA6-201ENST00000517434 WWC1Q8IX03 1113 aa15.04■□□□□ -0
PCDHGA6-201ENST00000517434 SYTL4Q96C24 671 aaPredicted RBP15.04■□□□□ -0
PCDHGA6-201ENST00000517434 EHBP1L1Q8N3D4 1523 aa15.04■□□□□ -0
PCDHGA6-201ENST00000517434 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
PCDHGA6-201ENST00000517434 HECW1Q76N89 1606 aa15.03■□□□□ -0
PCDHGA6-201ENST00000517434 APPP05067 770 aa15.03■□□□□ -0
PCDHGA6-201ENST00000517434 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
PCDHGA6-201ENST00000517434 CD109Q6YHK3 1445 aa15.03■□□□□ -0
PCDHGA6-201ENST00000517434 RRP9O43818 475 aaKnown RBP15.03■□□□□ -0
PCDHGA6-201ENST00000517434 AMOTL1Q8IY63 956 aa15.02■□□□□ -0
PCDHGA6-201ENST00000517434 BRPF3Q9ULD4 1205 aa15.02■□□□□ -0
PCDHGA6-201ENST00000517434 ESCO1Q5FWF5 840 aa15.02□□□□□ -0.01
PCDHGA6-201ENST00000517434 MRE11P49959 708 aa15.01□□□□□ -0.01
PCDHGA6-201ENST00000517434 CCDC66A2RUB6 948 aa15.01□□□□□ -0.01
PCDHGA6-201ENST00000517434 C9orf84Q5VXU9 1444 aa15.01□□□□□ -0.01
PCDHGA6-201ENST00000517434 APBB1O00213 710 aa15.01□□□□□ -0.01
PCDHGA6-201ENST00000517434 KIF3AQ9Y496 699 aa15□□□□□ -0.01
PCDHGA6-201ENST00000517434 CHMP5Q9NZZ3 219 aa15□□□□□ -0.01
PCDHGA6-201ENST00000517434 TAOK2Q9UL54 1235 aa15□□□□□ -0.01
PCDHGA6-201ENST00000517434 RAPGEF3O95398 923 aa14.99□□□□□ -0.01
PCDHGA6-201ENST00000517434 E9PSI1 815 aa14.99□□□□□ -0.01
PCDHGA6-201ENST00000517434 SMG6Q86US8 1419 aaKnown RBP14.99□□□□□ -0.01
PCDHGA6-201ENST00000517434 NOM1Q5C9Z4 860 aaKnown RBP14.98□□□□□ -0.01
PCDHGA6-201ENST00000517434 ANKRD30BQ9BXX2 1392 aa14.98□□□□□ -0.01
PCDHGA6-201ENST00000517434 ST18O60284 1047 aa14.98□□□□□ -0.01
PCDHGA6-201ENST00000517434 ABTB2Q8N961 1025 aa14.98□□□□□ -0.01
PCDHGA6-201ENST00000517434 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
PCDHGA6-201ENST00000517434 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
PCDHGA6-201ENST00000517434 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
PCDHGA6-201ENST00000517434 R3HCC1Q9Y3T6 440 aaKnown RBP14.97□□□□□ -0.01
PCDHGA6-201ENST00000517434 TRIM34Q9BYJ4 488 aa14.96□□□□□ -0.01
PCDHGA6-201ENST00000517434 C9orf78Q9NZ63 289 aaPredicted RBP14.96□□□□□ -0.01
PCDHGA6-201ENST00000517434 ROCK1Q13464 1354 aa14.96□□□□□ -0.01
PCDHGA6-201ENST00000517434 ZBED9Q6R2W3 1325 aa14.96□□□□□ -0.01
PCDHGA6-201ENST00000517434 UBE2Q2Q8WVN8 375 aa14.96□□□□□ -0.01
PCDHGA6-201ENST00000517434 GNAI1P63096 354 aa14.96□□□□□ -0.02
PCDHGA6-201ENST00000517434 CCDC146Q8IYE0 955 aa14.95□□□□□ -0.02
PCDHGA6-201ENST00000517434 GAS2L2Q8NHY3 880 aa14.95□□□□□ -0.02
PCDHGA6-201ENST00000517434 CLSTN1O94985 981 aa14.95□□□□□ -0.02
PCDHGA6-201ENST00000517434 DIAPH3Q9NSV4 1193 aa14.95□□□□□ -0.02
PCDHGA6-201ENST00000517434 IQGAP2Q13576 1575 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms