RNA–Protein interactions for RNA: ENST00000514315.2

HMGCR-212, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-212ENST00000514315 CCDC141Q6ZP82 1450 aa11.37□□□□□ -0.59
HMGCR-212ENST00000514315 ABCC3O15438 1527 aa11.36□□□□□ -0.59
HMGCR-212ENST00000514315 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
HMGCR-212ENST00000514315 ARHGAP23Q9P227 1491 aa11.36□□□□□ -0.59
HMGCR-212ENST00000514315 SETD1AO15047 1707 aaKnown RBP11.35□□□□□ -0.59
HMGCR-212ENST00000514315 ERVK-7P63135 1459 aa11.35□□□□□ -0.59
HMGCR-212ENST00000514315 CAMSAP2Q08AD1 1489 aa11.35□□□□□ -0.59
HMGCR-212ENST00000514315 ARHGEF5Q12774 1597 aa11.34□□□□□ -0.59
HMGCR-212ENST00000514315 SCAF11Q99590 1463 aaKnown RBP11.34□□□□□ -0.59
HMGCR-212ENST00000514315 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
HMGCR-212ENST00000514315 SLIT1O75093 1534 aa11.34□□□□□ -0.59
HMGCR-212ENST00000514315 ROBO1Q9Y6N7 1651 aa11.33□□□□□ -0.6
HMGCR-212ENST00000514315 TSPY4P0CV99 314 aa11.33□□□□□ -0.6
HMGCR-212ENST00000514315 TSPY10P0CW01 314 aa11.33□□□□□ -0.6
HMGCR-212ENST00000514315 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
HMGCR-212ENST00000514315 TET3O43151 1660 aa11.31□□□□□ -0.6
HMGCR-212ENST00000514315 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
HMGCR-212ENST00000514315 TMEM94Q12767 1356 aa11.3□□□□□ -0.6
HMGCR-212ENST00000514315 KCNA6P17658 529 aa11.3□□□□□ -0.6
HMGCR-212ENST00000514315 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
HMGCR-212ENST00000514315 PIK3C2BO00750 1634 aa11.3□□□□□ -0.6
HMGCR-212ENST00000514315 MAST1Q9Y2H9 1570 aa11.29□□□□□ -0.6
HMGCR-212ENST00000514315 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.6
HMGCR-212ENST00000514315 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
HMGCR-212ENST00000514315 EIF2AK4Q9P2K8 1649 aaKnown RBP11.28□□□□□ -0.6
HMGCR-212ENST00000514315 IDI1Q13907 227 aa11.28□□□□□ -0.6
HMGCR-212ENST00000514315 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
HMGCR-212ENST00000514315 SLC26A8Q96RN1 970 aa11.28□□□□□ -0.6
HMGCR-212ENST00000514315 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
HMGCR-212ENST00000514315 TMEM2Q9UHN6 1383 aa11.28□□□□□ -0.6
HMGCR-212ENST00000514315 ARHGAP31Q2M1Z3 1444 aa11.27□□□□□ -0.6
HMGCR-212ENST00000514315 SLAIN2Q9P270 581 aa11.27□□□□□ -0.61
HMGCR-212ENST00000514315 EID1Q9Y6B2 187 aa11.27□□□□□ -0.61
HMGCR-212ENST00000514315 CHD2O14647 1828 aaKnown RBP11.27□□□□□ -0.61
HMGCR-212ENST00000514315 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
HMGCR-212ENST00000514315 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
HMGCR-212ENST00000514315 MYO5BQ9ULV0 1848 aa11.25□□□□□ -0.61
HMGCR-212ENST00000514315 KDM5AP29375 1690 aaKnown RBP11.24□□□□□ -0.61
HMGCR-212ENST00000514315 KANK4Q5T7N3 995 aaPredicted RBP11.24□□□□□ -0.61
HMGCR-212ENST00000514315 PRDM15P57071 1507 aaPredicted RBP11.24□□□□□ -0.61
HMGCR-212ENST00000514315 LRP6O75581 1613 aa11.22□□□□□ -0.61
HMGCR-212ENST00000514315 COL16A1Q07092 1604 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-212ENST00000514315 JCADQ9P266 1359 aa11.22□□□□□ -0.61
HMGCR-212ENST00000514315 DUOX2Q9NRD8 1548 aa11.21□□□□□ -0.61
HMGCR-212ENST00000514315 NWD1Q149M9 1564 aa11.2□□□□□ -0.62
HMGCR-212ENST00000514315 RRP7BPQ9NSQ0 103 aa11.2□□□□□ -0.62
HMGCR-212ENST00000514315 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
HMGCR-212ENST00000514315 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
HMGCR-212ENST00000514315 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
HMGCR-212ENST00000514315 SRCAPQ6ZRS2 3230 aa11.18□□□□□ -0.62
HMGCR-212ENST00000514315 FARP1Q9Y4F1 1045 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-212ENST00000514315 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-212ENST00000514315 ABCC5O15440 1437 aa11.18□□□□□ -0.62
HMGCR-212ENST00000514315 NOS1P29475 1434 aa11.18□□□□□ -0.62
HMGCR-212ENST00000514315 NKTRP30414 1462 aaKnown RBP11.17□□□□□ -0.62
HMGCR-212ENST00000514315 MYOM3Q5VTT5 1437 aa11.17□□□□□ -0.62
HMGCR-212ENST00000514315 MSH6P52701 1360 aa11.16□□□□□ -0.62
HMGCR-212ENST00000514315 KIF15Q9NS87 1388 aa11.16□□□□□ -0.62
HMGCR-212ENST00000514315 SPATA31A6Q5VVP1 1343 aa11.16□□□□□ -0.62
HMGCR-212ENST00000514315 ZNF772Q68DY9 489 aaPredicted RBP11.16□□□□□ -0.62
HMGCR-212ENST00000514315 SHPRHQ149N8 1683 aa11.16□□□□□ -0.62
HMGCR-212ENST00000514315 CROCC2H7BZ55 1655 aa11.15□□□□□ -0.62
HMGCR-212ENST00000514315 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
HMGCR-212ENST00000514315 LMTK2Q8IWU2 1503 aa11.14□□□□□ -0.63
HMGCR-212ENST00000514315 RXRBP28702 533 aa11.14□□□□□ -0.63
HMGCR-212ENST00000514315 TBX22Q9Y458 520 aa11.14□□□□□ -0.63
HMGCR-212ENST00000514315 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
HMGCR-212ENST00000514315 ERBINQ96RT1 1412 aa11.14□□□□□ -0.63
HMGCR-212ENST00000514315 DIP2AQ14689 1571 aa11.13□□□□□ -0.63
HMGCR-212ENST00000514315 C19orf44Q9H6X5 657 aa11.13□□□□□ -0.63
HMGCR-212ENST00000514315 SLC52A1Q9NWF4 448 aa11.13□□□□□ -0.63
HMGCR-212ENST00000514315 AHDC1Q5TGY3 1603 aaPredicted RBP11.13□□□□□ -0.63
HMGCR-212ENST00000514315 GABBR2O75899 941 aa11.12□□□□□ -0.63
HMGCR-212ENST00000514315 BCANQ96GW7 911 aa11.12□□□□□ -0.63
HMGCR-212ENST00000514315 ADGRB3O60242 1522 aa11.12□□□□□ -0.63
HMGCR-212ENST00000514315 TMEM131LA2VDJ0 1609 aa11.12□□□□□ -0.63
HMGCR-212ENST00000514315 NCOA3Q9Y6Q9 1424 aa11.11□□□□□ -0.63
HMGCR-212ENST00000514315 BRINP3Q76B58 766 aa11.11□□□□□ -0.63
HMGCR-212ENST00000514315 CHIC2Q9UKJ5 165 aa11.11□□□□□ -0.63
HMGCR-212ENST00000514315 PLEKHG1Q9ULL1 1385 aa11.11□□□□□ -0.63
HMGCR-212ENST00000514315 GCC2Q8IWJ2 1684 aa11.11□□□□□ -0.63
HMGCR-212ENST00000514315 ADAMTS13Q76LX8 1427 aa11.1□□□□□ -0.63
HMGCR-212ENST00000514315 NUTM2BA6NNL0 878 aaPredicted RBP11.1□□□□□ -0.63
HMGCR-212ENST00000514315 NUTM2EB1AL46 878 aaPredicted RBP11.1□□□□□ -0.63
HMGCR-212ENST00000514315 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
HMGCR-212ENST00000514315 MEX3CQ5U5Q3 659 aaKnown RBP11.1□□□□□ -0.63
HMGCR-212ENST00000514315 NUTM2AQ8IVF1 878 aaPredicted RBP11.1□□□□□ -0.63
HMGCR-212ENST00000514315 KANK1Q14678 1352 aa11.1□□□□□ -0.63
HMGCR-212ENST00000514315 CDK12Q9NYV4 1490 aaPredicted RBP11.1□□□□□ -0.63
HMGCR-212ENST00000514315 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
HMGCR-212ENST00000514315 LOC105371045A0A1W2PR82 267 aa11.09□□□□□ -0.63
HMGCR-212ENST00000514315 NUTM2DQ5VT03 806 aaPredicted RBP11.09□□□□□ -0.63
HMGCR-212ENST00000514315 DAPK1P53355 1430 aa11.09□□□□□ -0.63
HMGCR-212ENST00000514315 RIMS2Q9UQ26 1411 aa11.09□□□□□ -0.63
HMGCR-212ENST00000514315 AFF2P51816 1311 aa11.09□□□□□ -0.63
HMGCR-212ENST00000514315 CADPS2Q86UW7 1296 aa11.08□□□□□ -0.64
HMGCR-212ENST00000514315 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
HMGCR-212ENST00000514315 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
HMGCR-212ENST00000514315 VPS8Q8N3P4 1428 aa11.08□□□□□ -0.64
HMGCR-212ENST00000514315 PTPRUQ92729 1446 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms