RNA–Protein interactions for RNA: ENST00000508457.1

C4orf46-202, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 5 BASIC

Gene C4orf46, Length 3,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-202ENST00000508457 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
C4orf46-202ENST00000508457 ZCCHC11Q5TAX3 1644 aaKnown RBP11.18□□□□□ -0.62
C4orf46-202ENST00000508457 UQCRHLA0A096LP55 91 aa11.18□□□□□ -0.62
C4orf46-202ENST00000508457 UQCRHP07919 91 aa11.18□□□□□ -0.62
C4orf46-202ENST00000508457 ABCA8O94911 1581 aa11.17□□□□□ -0.62
C4orf46-202ENST00000508457 KIF20AO95235 890 aa11.17□□□□□ -0.62
C4orf46-202ENST00000508457 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
C4orf46-202ENST00000508457 ATP10BO94823 1461 aa11.16□□□□□ -0.62
C4orf46-202ENST00000508457 AKNAQ7Z591 1439 aa11.16□□□□□ -0.62
C4orf46-202ENST00000508457 CLGNO14967 610 aa11.16□□□□□ -0.62
C4orf46-202ENST00000508457 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
C4orf46-202ENST00000508457 MYOM3Q5VTT5 1437 aa11.15□□□□□ -0.62
C4orf46-202ENST00000508457 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
C4orf46-202ENST00000508457 ZNF771Q7L3S4 317 aaPredicted RBP11.15□□□□□ -0.62
C4orf46-202ENST00000508457 UACAQ9BZF9 1416 aa11.14□□□□□ -0.63
C4orf46-202ENST00000508457 RRBP1Q9P2E9 1410 aaKnown RBP11.14□□□□□ -0.63
C4orf46-202ENST00000508457 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
C4orf46-202ENST00000508457 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
C4orf46-202ENST00000508457 SETD5Q9C0A6 1442 aa11.14□□□□□ -0.63
C4orf46-202ENST00000508457 LETM1O95202 739 aaPredicted RBP11.14□□□□□ -0.63
C4orf46-202ENST00000508457 MLECQ14165 292 aa11.14□□□□□ -0.63
C4orf46-202ENST00000508457 CCDC9Q9Y3X0 531 aaKnown RBP11.14□□□□□ -0.63
C4orf46-202ENST00000508457 TRERF1Q96PN7 1200 aa11.13□□□□□ -0.63
C4orf46-202ENST00000508457 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
C4orf46-202ENST00000508457 CCDC18Q5T9S5 1454 aa11.13□□□□□ -0.63
C4orf46-202ENST00000508457 TEX14Q8IWB6 1497 aa11.13□□□□□ -0.63
C4orf46-202ENST00000508457 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
C4orf46-202ENST00000508457 TRHP20396 242 aaPredicted RBP11.12□□□□□ -0.63
C4orf46-202ENST00000508457 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
C4orf46-202ENST00000508457 MSNP26038 577 aaKnown RBP11.12□□□□□ -0.63
C4orf46-202ENST00000508457 RGL3Q3MIN7 710 aa11.12□□□□□ -0.63
C4orf46-202ENST00000508457 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
C4orf46-202ENST00000508457 MPNDQ8N594 471 aa11.12□□□□□ -0.63
C4orf46-202ENST00000508457 CCDC94Q9BW85 323 aaPredicted RBP11.11□□□□□ -0.63
C4orf46-202ENST00000508457 GTPBP4Q9BZE4 634 aaKnown RBP11.11□□□□□ -0.63
C4orf46-202ENST00000508457 CC2D1BQ5T0F9 858 aaKnown RBP11.11□□□□□ -0.63
C4orf46-202ENST00000508457 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.11□□□□□ -0.63
C4orf46-202ENST00000508457 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
C4orf46-202ENST00000508457 TROQ12816 1431 aaPredicted RBP11.1□□□□□ -0.63
C4orf46-202ENST00000508457 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
C4orf46-202ENST00000508457 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
C4orf46-202ENST00000508457 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
C4orf46-202ENST00000508457 RAPGEF3O95398 923 aa11.1□□□□□ -0.63
C4orf46-202ENST00000508457 FAM69CQ0P6D2 419 aa11.1□□□□□ -0.63
C4orf46-202ENST00000508457 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
C4orf46-202ENST00000508457 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
C4orf46-202ENST00000508457 ZNF592Q92610 1267 aa11.09□□□□□ -0.63
C4orf46-202ENST00000508457 HECW1Q76N89 1606 aa11.09□□□□□ -0.63
C4orf46-202ENST00000508457 MTERF4Q7Z6M4 381 aaKnown RBP11.08□□□□□ -0.64
C4orf46-202ENST00000508457 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
C4orf46-202ENST00000508457 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
C4orf46-202ENST00000508457 OFD1O75665 1012 aa11.08□□□□□ -0.64
C4orf46-202ENST00000508457 MRE11P49959 708 aa11.08□□□□□ -0.64
C4orf46-202ENST00000508457 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
C4orf46-202ENST00000508457 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
C4orf46-202ENST00000508457 RAPGEF6Q8TEU7 1601 aa11.08□□□□□ -0.64
C4orf46-202ENST00000508457 TSC1Q92574 1164 aa11.08□□□□□ -0.64
C4orf46-202ENST00000508457 GRPEL1Q9HAV7 217 aa11.08□□□□□ -0.64
C4orf46-202ENST00000508457 EFCAB2Q5VUJ9 269 aa11.07□□□□□ -0.64
C4orf46-202ENST00000508457 MRS2Q9HD23 443 aa11.07□□□□□ -0.64
C4orf46-202ENST00000508457 ABCA9Q8IUA7 1624 aa11.07□□□□□ -0.64
C4orf46-202ENST00000508457 ASXL2Q76L83 1435 aa11.07□□□□□ -0.64
C4orf46-202ENST00000508457 TAF3Q5VWG9 929 aa11.07□□□□□ -0.64
C4orf46-202ENST00000508457 DNAJC2Q99543 621 aaKnown RBP11.07□□□□□ -0.64
C4orf46-202ENST00000508457 PTMSP20962 102 aa11.07□□□□□ -0.64
C4orf46-202ENST00000508457 XPCQ01831 940 aaPredicted RBP11.07□□□□□ -0.64
C4orf46-202ENST00000508457 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
C4orf46-202ENST00000508457 PKD2Q13563 968 aa11.07□□□□□ -0.64
C4orf46-202ENST00000508457 GGT6Q6P531 493 aa11.07□□□□□ -0.64
C4orf46-202ENST00000508457 JARID2Q92833 1246 aaPredicted RBP11.07□□□□□ -0.64
C4orf46-202ENST00000508457 PSEN1P49768 467 aa11.06□□□□□ -0.64
C4orf46-202ENST00000508457 ARAP3Q8WWN8 1544 aa11.05□□□□□ -0.64
C4orf46-202ENST00000508457 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
C4orf46-202ENST00000508457 WDR7Q9Y4E6 1490 aa11.05□□□□□ -0.64
C4orf46-202ENST00000508457 ZNF622Q969S3 477 aaKnown RBP eCLIP11.05□□□□□ -0.64
C4orf46-202ENST00000508457 LRRIQ1Q96JM4 1722 aa11.05□□□□□ -0.64
C4orf46-202ENST00000508457 KIF14Q15058 1648 aa11.05□□□□□ -0.64
C4orf46-202ENST00000508457 TNNT3P45378 269 aaPredicted RBP11.05□□□□□ -0.64
C4orf46-202ENST00000508457 MS4A1P11836 297 aa11.04□□□□□ -0.64
C4orf46-202ENST00000508457 EHBP1L1Q8N3D4 1523 aa11.04□□□□□ -0.64
C4orf46-202ENST00000508457 GPATCH8Q9UKJ3 1502 aaKnown RBP11.04□□□□□ -0.64
C4orf46-202ENST00000508457 FAM177BA6PVY3 158 aa11.03□□□□□ -0.64
C4orf46-202ENST00000508457 FSD2A1L4K1 749 aa11.03□□□□□ -0.64
C4orf46-202ENST00000508457 TNNT1P13805 278 aa11.03□□□□□ -0.64
C4orf46-202ENST00000508457 CFAP74Q9C0B2 1584 aa11.03□□□□□ -0.64
C4orf46-202ENST00000508457 NUP155O75694 1391 aa11.03□□□□□ -0.64
C4orf46-202ENST00000508457 TONSLQ96HA7 1378 aa11.02□□□□□ -0.64
C4orf46-202ENST00000508457 BANK1Q8NDB2 785 aa11.02□□□□□ -0.64
C4orf46-202ENST00000508457 PLCD4Q9BRC7 762 aa11.02□□□□□ -0.64
C4orf46-202ENST00000508457 ABCC5O15440 1437 aa11.02□□□□□ -0.64
C4orf46-202ENST00000508457 KIF3BO15066 747 aa11.02□□□□□ -0.65
C4orf46-202ENST00000508457 TMX1Q9H3N1 280 aa11.02□□□□□ -0.65
C4orf46-202ENST00000508457 ATP2B3Q16720 1220 aa11.02□□□□□ -0.65
C4orf46-202ENST00000508457 MMP14P50281 582 aa11.01□□□□□ -0.65
C4orf46-202ENST00000508457 RALBP1Q15311 655 aa11.01□□□□□ -0.65
C4orf46-202ENST00000508457 ZSCAN30Q86W11 494 aa11.01□□□□□ -0.65
C4orf46-202ENST00000508457 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
C4orf46-202ENST00000508457 ARHGAP5Q13017 1502 aa11.01□□□□□ -0.65
C4orf46-202ENST00000508457 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
C4orf46-202ENST00000508457 NAIPQ13075 1403 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms