RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CDCA7LQ96GN5 454 aa19.46■□□□□ 0.71
DDX41-208ENST00000507955 IQGAP1P46940 1657 aa19.46■□□□□ 0.71
DDX41-208ENST00000507955 ERICH6BQ5W0A0 696 aa19.46■□□□□ 0.71
DDX41-208ENST00000507955 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
DDX41-208ENST00000507955 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
DDX41-208ENST00000507955 EFCAB6Q5THR3 1501 aa19.45■□□□□ 0.7
DDX41-208ENST00000507955 FRMPD1Q5SYB0 1578 aa19.44■□□□□ 0.7
DDX41-208ENST00000507955 NPATQ14207 1427 aa19.43■□□□□ 0.7
DDX41-208ENST00000507955 MROH2AA6NES4 1674 aa19.43■□□□□ 0.7
DDX41-208ENST00000507955 TMEM132EQ6IEE7 984 aa19.43■□□□□ 0.7
DDX41-208ENST00000507955 NOS1P29475 1434 aa19.42■□□□□ 0.7
DDX41-208ENST00000507955 AMER1Q5JTC6 1135 aaPredicted RBP19.41■□□□□ 0.7
DDX41-208ENST00000507955 TRAK1Q9UPV9 953 aa19.41■□□□□ 0.7
DDX41-208ENST00000507955 ADAMTS8Q9UP79 889 aa19.4■□□□□ 0.7
DDX41-208ENST00000507955 FANCIQ9NVI1 1328 aa19.4■□□□□ 0.7
DDX41-208ENST00000507955 PPP2R1AP30153 589 aa19.39■□□□□ 0.7
DDX41-208ENST00000507955 ABCA6Q8N139 1617 aa19.39■□□□□ 0.7
DDX41-208ENST00000507955 STAC3Q96MF2 364 aa19.39■□□□□ 0.69
DDX41-208ENST00000507955 KIF1BO60333 1816 aa19.39■□□□□ 0.69
DDX41-208ENST00000507955 MAP3K4Q9Y6R4 1608 aa19.39■□□□□ 0.69
DDX41-208ENST00000507955 MLH3Q9UHC1 1453 aa19.38■□□□□ 0.69
DDX41-208ENST00000507955 HECW2Q9P2P5 1572 aa19.37■□□□□ 0.69
DDX41-208ENST00000507955 RNF123Q5XPI4 1314 aa19.37■□□□□ 0.69
DDX41-208ENST00000507955 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
DDX41-208ENST00000507955 EIF3AQ14152 1382 aaKnown RBP19.35■□□□□ 0.69
DDX41-208ENST00000507955 CARD14Q9BXL6 1004 aa19.35■□□□□ 0.69
DDX41-208ENST00000507955 YEATS2Q9ULM3 1422 aa19.34■□□□□ 0.69
DDX41-208ENST00000507955 ERVK-7P63135 1459 aa19.33■□□□□ 0.69
DDX41-208ENST00000507955 LMTK2Q8IWU2 1503 aa19.33■□□□□ 0.69
DDX41-208ENST00000507955 MYOM2P54296 1465 aa19.33■□□□□ 0.68
DDX41-208ENST00000507955 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
DDX41-208ENST00000507955 MYOM1P52179 1685 aa19.32■□□□□ 0.68
DDX41-208ENST00000507955 CCDC136Q96JN2 1154 aa19.32■□□□□ 0.68
DDX41-208ENST00000507955 PLIN1O60240 522 aa19.31■□□□□ 0.68
DDX41-208ENST00000507955 CFAP74Q9C0B2 1584 aa19.31■□□□□ 0.68
DDX41-208ENST00000507955 ABCC3O15438 1527 aa19.31■□□□□ 0.68
DDX41-208ENST00000507955 CCDC146Q8IYE0 955 aa19.3■□□□□ 0.68
DDX41-208ENST00000507955 ADGRB3O60242 1522 aa19.3■□□□□ 0.68
DDX41-208ENST00000507955 IFT172Q9UG01 1749 aa19.3■□□□□ 0.68
DDX41-208ENST00000507955 SAFB2Q14151 953 aaKnown RBP eCLIP19.3■□□□□ 0.68
DDX41-208ENST00000507955 SYNMO15061 1565 aa19.29■□□□□ 0.68
DDX41-208ENST00000507955 RRP1P56182 461 aaKnown RBP19.29■□□□□ 0.68
DDX41-208ENST00000507955 SIGLEC1Q9BZZ2 1709 aa19.29■□□□□ 0.68
DDX41-208ENST00000507955 CENPJQ9HC77 1338 aaPredicted RBP19.29■□□□□ 0.68
DDX41-208ENST00000507955 IDI1Q13907 227 aa19.29■□□□□ 0.68
DDX41-208ENST00000507955 WDR43Q15061 677 aaKnown RBP eCLIP19.29■□□□□ 0.68
DDX41-208ENST00000507955 EXOC6Q8TAG9 804 aa19.29■□□□□ 0.68
DDX41-208ENST00000507955 SLC12A5Q9H2X9 1139 aa19.29■□□□□ 0.68
DDX41-208ENST00000507955 C14orf93Q9H972 538 aaKnown RBP19.29■□□□□ 0.68
DDX41-208ENST00000507955 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
DDX41-208ENST00000507955 FAM69CQ0P6D2 419 aa19.28■□□□□ 0.68
DDX41-208ENST00000507955 KIAA1210Q9ULL0 1709 aa19.28■□□□□ 0.68
DDX41-208ENST00000507955 ASXL1Q8IXJ9 1541 aa19.28■□□□□ 0.68
DDX41-208ENST00000507955 BLMP54132 1417 aaPredicted RBP19.28■□□□□ 0.68
DDX41-208ENST00000507955 NRXN1Q9ULB1 1477 aa19.28■□□□□ 0.68
DDX41-208ENST00000507955 NEO1Q92859 1461 aa19.27■□□□□ 0.68
DDX41-208ENST00000507955 NEURL4Q96JN8 1562 aa19.26■□□□□ 0.67
DDX41-208ENST00000507955 DIP2CQ9Y2E4 1556 aa19.26■□□□□ 0.67
DDX41-208ENST00000507955 KDM5AP29375 1690 aaKnown RBP19.26■□□□□ 0.67
DDX41-208ENST00000507955 PIK3C2GO75747 1445 aa19.26■□□□□ 0.67
DDX41-208ENST00000507955 FBXO31Q5XUX0 539 aaPredicted RBP19.25■□□□□ 0.67
DDX41-208ENST00000507955 PLEKHH1Q9ULM0 1364 aa19.25■□□□□ 0.67
DDX41-208ENST00000507955 STK26Q9P289 416 aa19.24■□□□□ 0.67
DDX41-208ENST00000507955 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
DDX41-208ENST00000507955 CAMSAP1Q5T5Y3 1602 aa19.23■□□□□ 0.67
DDX41-208ENST00000507955 PPLO60437 1756 aa19.22■□□□□ 0.67
DDX41-208ENST00000507955 RICTORQ6R327 1708 aa19.21■□□□□ 0.67
DDX41-208ENST00000507955 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
DDX41-208ENST00000507955 APAF1O14727 1248 aa19.19■□□□□ 0.66
DDX41-208ENST00000507955 VGFO15240 615 aaPredicted RBP19.18■□□□□ 0.66
DDX41-208ENST00000507955 MLECQ14165 292 aa19.18■□□□□ 0.66
DDX41-208ENST00000507955 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
DDX41-208ENST00000507955 TSPOAP1O95153 1857 aa19.18■□□□□ 0.66
DDX41-208ENST00000507955 ZMYM4Q5VZL5 1548 aa19.17■□□□□ 0.66
DDX41-208ENST00000507955 C20orf194Q5TEA3 1177 aa19.17■□□□□ 0.66
DDX41-208ENST00000507955 SPINK5Q9NQ38 1064 aaPredicted RBP19.17■□□□□ 0.66
DDX41-208ENST00000507955 NSD3Q9BZ95 1437 aa19.17■□□□□ 0.66
DDX41-208ENST00000507955 RPGRIP1LQ68CZ1 1315 aa19.17■□□□□ 0.66
DDX41-208ENST00000507955 ERICH6Q7L0X2 663 aa19.15■□□□□ 0.66
DDX41-208ENST00000507955 NPC1L1Q9UHC9 1359 aa19.15■□□□□ 0.66
DDX41-208ENST00000507955 SETBP1Q9Y6X0 1596 aa19.14■□□□□ 0.66
DDX41-208ENST00000507955 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.66
DDX41-208ENST00000507955 DUSP27Q5VZP5 1158 aa19.14■□□□□ 0.65
DDX41-208ENST00000507955 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
DDX41-208ENST00000507955 MORC1Q86VD1 984 aa19.14■□□□□ 0.65
DDX41-208ENST00000507955 SKAP1Q86WV1 359 aa19.14■□□□□ 0.65
DDX41-208ENST00000507955 SBNO2Q9Y2G9 1366 aa19.14■□□□□ 0.65
DDX41-208ENST00000507955 NEXMIFQ5QGS0 1516 aa19.13■□□□□ 0.65
DDX41-208ENST00000507955 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
DDX41-208ENST00000507955 MYO3AQ8NEV4 1616 aa19.13■□□□□ 0.65
DDX41-208ENST00000507955 CRBNQ96SW2 442 aa19.13■□□□□ 0.65
DDX41-208ENST00000507955 RIMBP3CA6NJZ7 1639 aa19.13■□□□□ 0.65
DDX41-208ENST00000507955 RIMBP3BA6NNM3 1639 aa19.13■□□□□ 0.65
DDX41-208ENST00000507955 RIMBP3Q9UFD9 1639 aa19.13■□□□□ 0.65
DDX41-208ENST00000507955 PIK3C2BO00750 1634 aa19.12■□□□□ 0.65
DDX41-208ENST00000507955 MYO5BQ9ULV0 1848 aa19.12■□□□□ 0.65
DDX41-208ENST00000507955 ZNF521Q96K83 1311 aa19.12■□□□□ 0.65
DDX41-208ENST00000507955 INSRP06213 1382 aa19.11■□□□□ 0.65
DDX41-208ENST00000507955 GLI2P10070 1586 aa19.11■□□□□ 0.65
DDX41-208ENST00000507955 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms