RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 TRIM52Q96A61 297 aa17.96■□□□□ 0.47
PRDM2-214ENST00000505823 GCC2Q8IWJ2 1684 aa17.96■□□□□ 0.47
PRDM2-214ENST00000505823 NEURL4Q96JN8 1562 aa17.96■□□□□ 0.46
PRDM2-214ENST00000505823 LTKP29376 864 aa17.95■□□□□ 0.46
PRDM2-214ENST00000505823 IQGAP1P46940 1657 aa17.95■□□□□ 0.46
PRDM2-214ENST00000505823 ARHGAP23Q9P227 1491 aa17.95■□□□□ 0.46
PRDM2-214ENST00000505823 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
PRDM2-214ENST00000505823 IQGAP3Q86VI3 1631 aa17.94■□□□□ 0.46
PRDM2-214ENST00000505823 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
PRDM2-214ENST00000505823 ADGRB3O60242 1522 aa17.91■□□□□ 0.46
PRDM2-214ENST00000505823 SYNMO15061 1565 aa17.91■□□□□ 0.46
PRDM2-214ENST00000505823 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
PRDM2-214ENST00000505823 NAIPQ13075 1403 aa17.9■□□□□ 0.46
PRDM2-214ENST00000505823 KCNA4P22459 653 aa17.9■□□□□ 0.46
PRDM2-214ENST00000505823 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
PRDM2-214ENST00000505823 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
PRDM2-214ENST00000505823 RIMS2Q9UQ26 1411 aa17.86■□□□□ 0.45
PRDM2-214ENST00000505823 E9PCH4 1651 aa17.86■□□□□ 0.45
PRDM2-214ENST00000505823 KCNA6P17658 529 aa17.84■□□□□ 0.45
PRDM2-214ENST00000505823 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
PRDM2-214ENST00000505823 PLEKHG1Q9ULL1 1385 aa17.83■□□□□ 0.45
PRDM2-214ENST00000505823 PIP4K2BP78356 416 aa17.81■□□□□ 0.44
PRDM2-214ENST00000505823 PROSER2Q86WR7 435 aaPredicted RBP17.81■□□□□ 0.44
PRDM2-214ENST00000505823 TBX22Q9Y458 520 aa17.81■□□□□ 0.44
PRDM2-214ENST00000505823 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
PRDM2-214ENST00000505823 ZFYVE9O95405 1425 aa17.79■□□□□ 0.44
PRDM2-214ENST00000505823 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.44
PRDM2-214ENST00000505823 SPHKAPQ2M3C7 1700 aa17.76■□□□□ 0.43
PRDM2-214ENST00000505823 NUTM2DQ5VT03 806 aaPredicted RBP17.76■□□□□ 0.43
PRDM2-214ENST00000505823 VGFO15240 615 aaPredicted RBP17.75■□□□□ 0.43
PRDM2-214ENST00000505823 PIK3R4Q99570 1358 aa17.75■□□□□ 0.43
PRDM2-214ENST00000505823 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
PRDM2-214ENST00000505823 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
PRDM2-214ENST00000505823 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
PRDM2-214ENST00000505823 TRPM2O94759 1503 aa17.73■□□□□ 0.43
PRDM2-214ENST00000505823 MPHOSPH9Q99550 1183 aa17.73■□□□□ 0.43
PRDM2-214ENST00000505823 NKTRP30414 1462 aaKnown RBP17.73■□□□□ 0.43
PRDM2-214ENST00000505823 TMEM94Q12767 1356 aa17.72■□□□□ 0.43
PRDM2-214ENST00000505823 DIP2AQ14689 1571 aa17.71■□□□□ 0.43
PRDM2-214ENST00000505823 MSH6P52701 1360 aa17.71■□□□□ 0.43
PRDM2-214ENST00000505823 MYO5BQ9ULV0 1848 aa17.71■□□□□ 0.43
PRDM2-214ENST00000505823 CCDC144AA2RUR9 1427 aa17.69■□□□□ 0.42
PRDM2-214ENST00000505823 KIF1BO60333 1816 aa17.68■□□□□ 0.42
PRDM2-214ENST00000505823 NCOA3Q9Y6Q9 1424 aa17.68■□□□□ 0.42
PRDM2-214ENST00000505823 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
PRDM2-214ENST00000505823 HSPA1LP34931 641 aa17.67■□□□□ 0.42
PRDM2-214ENST00000505823 ATF3P18847 181 aa17.66■□□□□ 0.42
PRDM2-214ENST00000505823 AMOTL2Q9Y2J4 779 aa17.66■□□□□ 0.42
PRDM2-214ENST00000505823 DISP3Q9P2K9 1392 aa17.66■□□□□ 0.42
PRDM2-214ENST00000505823 HRCP23327 699 aa17.65■□□□□ 0.42
PRDM2-214ENST00000505823 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
PRDM2-214ENST00000505823 CLTCL1P53675 1640 aa17.65■□□□□ 0.42
PRDM2-214ENST00000505823 ADAMTS13Q76LX8 1427 aa17.64■□□□□ 0.42
PRDM2-214ENST00000505823 CADPS2Q86UW7 1296 aa17.64■□□□□ 0.41
PRDM2-214ENST00000505823 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
PRDM2-214ENST00000505823 SLAIN2Q9P270 581 aa17.62■□□□□ 0.41
PRDM2-214ENST00000505823 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
PRDM2-214ENST00000505823 FAM135BQ49AJ0 1406 aa17.62■□□□□ 0.41
PRDM2-214ENST00000505823 CHD2O14647 1828 aaKnown RBP17.61■□□□□ 0.41
PRDM2-214ENST00000505823 RGL3Q3MIN7 710 aa17.61■□□□□ 0.41
PRDM2-214ENST00000505823 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
PRDM2-214ENST00000505823 SETBP1Q9Y6X0 1596 aa17.61■□□□□ 0.41
PRDM2-214ENST00000505823 ANKRD30BQ9BXX2 1392 aa17.6■□□□□ 0.41
PRDM2-214ENST00000505823 NEXMIFQ5QGS0 1516 aa17.58■□□□□ 0.41
PRDM2-214ENST00000505823 XIRP1Q702N8 1843 aaKnown RBP17.54■□□□□ 0.4
PRDM2-214ENST00000505823 METP08581 1390 aa17.53■□□□□ 0.4
PRDM2-214ENST00000505823 STAC3Q96MF2 364 aa17.52■□□□□ 0.4
PRDM2-214ENST00000505823 DCCP43146 1447 aa17.52■□□□□ 0.4
PRDM2-214ENST00000505823 ALKQ9UM73 1620 aa17.51■□□□□ 0.39
PRDM2-214ENST00000505823 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
PRDM2-214ENST00000505823 SPATA31E1Q6ZUB1 1445 aa17.5■□□□□ 0.39
PRDM2-214ENST00000505823 NRXN3Q9Y4C0 1643 aa17.49■□□□□ 0.39
PRDM2-214ENST00000505823 PPLO60437 1756 aa17.48■□□□□ 0.39
PRDM2-214ENST00000505823 PTCH1Q13635 1447 aa17.47■□□□□ 0.39
PRDM2-214ENST00000505823 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
PRDM2-214ENST00000505823 ROBO1Q9Y6N7 1651 aa17.46■□□□□ 0.39
PRDM2-214ENST00000505823 XRN1Q8IZH2 1706 aaKnown RBP17.46■□□□□ 0.39
PRDM2-214ENST00000505823 ADGRL3Q9HAR2 1447 aa17.46■□□□□ 0.39
PRDM2-214ENST00000505823 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.44■□□□□ 0.38
PRDM2-214ENST00000505823 STK26Q9P289 416 aa17.44■□□□□ 0.38
PRDM2-214ENST00000505823 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
PRDM2-214ENST00000505823 JCADQ9P266 1359 aa17.43■□□□□ 0.38
PRDM2-214ENST00000505823 C14orf93Q9H972 538 aaKnown RBP17.42■□□□□ 0.38
PRDM2-214ENST00000505823 LRPPRCP42704 1394 aaKnown RBP17.41■□□□□ 0.38
PRDM2-214ENST00000505823 BRINP3Q76B58 766 aa17.41■□□□□ 0.38
PRDM2-214ENST00000505823 DCAF11Q8TEB1 546 aa17.41■□□□□ 0.38
PRDM2-214ENST00000505823 ROBO2Q9HCK4 1378 aa17.4■□□□□ 0.38
PRDM2-214ENST00000505823 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
PRDM2-214ENST00000505823 PIK3C2GO75747 1445 aa17.4■□□□□ 0.38
PRDM2-214ENST00000505823 PRAG1Q86YV5 1406 aa17.4■□□□□ 0.38
PRDM2-214ENST00000505823 SIRT1Q96EB6 747 aa17.4■□□□□ 0.38
PRDM2-214ENST00000505823 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
PRDM2-214ENST00000505823 MYOM2P54296 1465 aa17.39■□□□□ 0.37
PRDM2-214ENST00000505823 LRRC59Q96AG4 307 aaKnown RBP17.39■□□□□ 0.37
PRDM2-214ENST00000505823 KDM2AQ9Y2K7 1162 aa17.39■□□□□ 0.37
PRDM2-214ENST00000505823 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
PRDM2-214ENST00000505823 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
PRDM2-214ENST00000505823 PHLPP1O60346 1717 aa17.38■□□□□ 0.37
PRDM2-214ENST00000505823 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
PRDM2-214ENST00000505823 MST1RQ04912 1400 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms