RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 CERKQ8TCT0 537 aa11.49□□□□□ -0.57
SKP2-203ENST00000504386 CCDC144AA2RUR9 1427 aa11.49□□□□□ -0.57
SKP2-203ENST00000504386 BCANQ96GW7 911 aa11.48□□□□□ -0.57
SKP2-203ENST00000504386 RIMS2Q9UQ26 1411 aa11.48□□□□□ -0.57
SKP2-203ENST00000504386 CPS1P31327 1500 aa11.48□□□□□ -0.57
SKP2-203ENST00000504386 NEURL4Q96JN8 1562 aa11.48□□□□□ -0.57
SKP2-203ENST00000504386 IQGAP1P46940 1657 aa11.48□□□□□ -0.57
SKP2-203ENST00000504386 TMEM131LA2VDJ0 1609 aa11.47□□□□□ -0.57
SKP2-203ENST00000504386 PLEKHG1Q9ULL1 1385 aa11.47□□□□□ -0.57
SKP2-203ENST00000504386 RPGRIP1LQ68CZ1 1315 aa11.47□□□□□ -0.57
SKP2-203ENST00000504386 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
SKP2-203ENST00000504386 LTKP29376 864 aa11.46□□□□□ -0.57
SKP2-203ENST00000504386 FBXO41Q8TF61 875 aa11.46□□□□□ -0.57
SKP2-203ENST00000504386 ZFYVE9O95405 1425 aa11.45□□□□□ -0.58
SKP2-203ENST00000504386 ZNF335Q9H4Z2 1342 aaPredicted RBP11.45□□□□□ -0.58
SKP2-203ENST00000504386 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
SKP2-203ENST00000504386 PIK3R4Q99570 1358 aa11.43□□□□□ -0.58
SKP2-203ENST00000504386 DIP2AQ14689 1571 aa11.43□□□□□ -0.58
SKP2-203ENST00000504386 TRIM26Q12899 539 aaPredicted RBP11.43□□□□□ -0.58
SKP2-203ENST00000504386 TBX22Q9Y458 520 aa11.42□□□□□ -0.58
SKP2-203ENST00000504386 CLTCL1P53675 1640 aa11.42□□□□□ -0.58
SKP2-203ENST00000504386 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
SKP2-203ENST00000504386 KIF1BO60333 1816 aa11.42□□□□□ -0.58
SKP2-203ENST00000504386 KCNA6P17658 529 aa11.41□□□□□ -0.58
SKP2-203ENST00000504386 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
SKP2-203ENST00000504386 ANKRD30BQ9BXX2 1392 aa11.41□□□□□ -0.58
SKP2-203ENST00000504386 PPP4R3CPQ6ZMV5 832 aa11.4□□□□□ -0.58
SKP2-203ENST00000504386 NKTRP30414 1462 aaKnown RBP11.39□□□□□ -0.59
SKP2-203ENST00000504386 TOM1O60784 492 aa11.39□□□□□ -0.59
SKP2-203ENST00000504386 SLC26A8Q96RN1 970 aa11.38□□□□□ -0.59
SKP2-203ENST00000504386 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
SKP2-203ENST00000504386 NCOA3Q9Y6Q9 1424 aa11.36□□□□□ -0.59
SKP2-203ENST00000504386 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
SKP2-203ENST00000504386 MYO5BQ9ULV0 1848 aa11.36□□□□□ -0.59
SKP2-203ENST00000504386 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
SKP2-203ENST00000504386 SPATA31E1Q6ZUB1 1445 aa11.35□□□□□ -0.59
SKP2-203ENST00000504386 NUTM2DQ5VT03 806 aaPredicted RBP11.35□□□□□ -0.59
SKP2-203ENST00000504386 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
SKP2-203ENST00000504386 ADAMTS13Q76LX8 1427 aa11.35□□□□□ -0.59
SKP2-203ENST00000504386 NWD1Q149M9 1564 aa11.34□□□□□ -0.59
SKP2-203ENST00000504386 UBAP1LF5GYI3 381 aa11.34□□□□□ -0.59
SKP2-203ENST00000504386 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
SKP2-203ENST00000504386 ILDR1Q86SU0 546 aaPredicted RBP11.34□□□□□ -0.59
SKP2-203ENST00000504386 LRRC7Q96NW7 1537 aa11.33□□□□□ -0.6
SKP2-203ENST00000504386 MSH6P52701 1360 aa11.32□□□□□ -0.6
SKP2-203ENST00000504386 MYOM2P54296 1465 aa11.32□□□□□ -0.6
SKP2-203ENST00000504386 TMEM94Q12767 1356 aa11.31□□□□□ -0.6
SKP2-203ENST00000504386 C14orf37Q86TY3 774 aa11.31□□□□□ -0.6
SKP2-203ENST00000504386 AMOTL2Q9Y2J4 779 aa11.31□□□□□ -0.6
SKP2-203ENST00000504386 PPLO60437 1756 aa11.3□□□□□ -0.6
SKP2-203ENST00000504386 CHD2O14647 1828 aaKnown RBP11.28□□□□□ -0.6
SKP2-203ENST00000504386 PRAG1Q86YV5 1406 aa11.28□□□□□ -0.6
SKP2-203ENST00000504386 CADPS2Q86UW7 1296 aa11.28□□□□□ -0.6
SKP2-203ENST00000504386 C19orf44Q9H6X5 657 aa11.28□□□□□ -0.6
SKP2-203ENST00000504386 ALKQ9UM73 1620 aa11.27□□□□□ -0.6
SKP2-203ENST00000504386 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
SKP2-203ENST00000504386 DCCP43146 1447 aa11.27□□□□□ -0.6
SKP2-203ENST00000504386 PTCH1Q13635 1447 aa11.27□□□□□ -0.6
SKP2-203ENST00000504386 ATF3P18847 181 aa11.27□□□□□ -0.61
SKP2-203ENST00000504386 ADGRF5Q8IZF2 1346 aa11.27□□□□□ -0.61
SKP2-203ENST00000504386 LAMC1P11047 1609 aa11.27□□□□□ -0.61
SKP2-203ENST00000504386 NRXN3Q9Y4C0 1643 aa11.27□□□□□ -0.61
SKP2-203ENST00000504386 METP08581 1390 aa11.27□□□□□ -0.61
SKP2-203ENST00000504386 DCAF11Q8TEB1 546 aa11.26□□□□□ -0.61
SKP2-203ENST00000504386 C14orf93Q9H972 538 aaKnown RBP11.26□□□□□ -0.61
SKP2-203ENST00000504386 DHX57Q6P158 1386 aaKnown RBP11.26□□□□□ -0.61
SKP2-203ENST00000504386 STRCP1A6NGW2 1772 aa11.26□□□□□ -0.61
SKP2-203ENST00000504386 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
SKP2-203ENST00000504386 XRN1Q8IZH2 1706 aaKnown RBP11.24□□□□□ -0.61
SKP2-203ENST00000504386 IFT172Q9UG01 1749 aa11.24□□□□□ -0.61
SKP2-203ENST00000504386 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
SKP2-203ENST00000504386 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
SKP2-203ENST00000504386 LRPPRCP42704 1394 aaKnown RBP11.24□□□□□ -0.61
SKP2-203ENST00000504386 ABCC11Q96J66 1382 aa11.24□□□□□ -0.61
SKP2-203ENST00000504386 PTPRUQ92729 1446 aa11.24□□□□□ -0.61
SKP2-203ENST00000504386 FAM135BQ49AJ0 1406 aa11.23□□□□□ -0.61
SKP2-203ENST00000504386 TECPR2O15040 1411 aa11.22□□□□□ -0.61
SKP2-203ENST00000504386 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
SKP2-203ENST00000504386 ADGRL3Q9HAR2 1447 aa11.22□□□□□ -0.61
SKP2-203ENST00000504386 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
SKP2-203ENST00000504386 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
SKP2-203ENST00000504386 CLSPNQ9HAW4 1339 aa11.21□□□□□ -0.61
SKP2-203ENST00000504386 YTHDC2Q9H6S0 1430 aaKnown RBP11.2□□□□□ -0.62
SKP2-203ENST00000504386 SETD1AO15047 1707 aaKnown RBP11.19□□□□□ -0.62
SKP2-203ENST00000504386 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
SKP2-203ENST00000504386 TONSLQ96HA7 1378 aa11.18□□□□□ -0.62
SKP2-203ENST00000504386 ROBO2Q9HCK4 1378 aa11.18□□□□□ -0.62
SKP2-203ENST00000504386 STK26Q9P289 416 aa11.18□□□□□ -0.62
SKP2-203ENST00000504386 EIF3AQ14152 1382 aaKnown RBP11.17□□□□□ -0.62
SKP2-203ENST00000504386 XIRP1Q702N8 1843 aaKnown RBP11.17□□□□□ -0.62
SKP2-203ENST00000504386 NEUROD1Q13562 356 aa11.17□□□□□ -0.62
SKP2-203ENST00000504386 TMEM132EQ6IEE7 984 aa11.17□□□□□ -0.62
SKP2-203ENST00000504386 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
SKP2-203ENST00000504386 PCGF6Q9BYE7 350 aa11.17□□□□□ -0.62
SKP2-203ENST00000504386 POGKQ9P215 609 aa11.17□□□□□ -0.62
SKP2-203ENST00000504386 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
SKP2-203ENST00000504386 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
SKP2-203ENST00000504386 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.15□□□□□ -0.62
SKP2-203ENST00000504386 HSPA1LP34931 641 aa11.15□□□□□ -0.62
SKP2-203ENST00000504386 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms