RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
PRDM2-213ENST00000503842 PIK3C2BO00750 1634 aa19.32■□□□□ 0.68
PRDM2-213ENST00000503842 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
PRDM2-213ENST00000503842 NEURL4Q96JN8 1562 aa19.28■□□□□ 0.68
PRDM2-213ENST00000503842 SPATA31E1Q6ZUB1 1445 aa19.28■□□□□ 0.68
PRDM2-213ENST00000503842 SLC52A1Q9NWF4 448 aa19.28■□□□□ 0.68
PRDM2-213ENST00000503842 TONSLQ96HA7 1378 aa19.28■□□□□ 0.68
PRDM2-213ENST00000503842 CEBPAP49715 358 aaPredicted RBP19.27■□□□□ 0.68
PRDM2-213ENST00000503842 TNRQ92752 1358 aa19.27■□□□□ 0.68
PRDM2-213ENST00000503842 IDI1Q13907 227 aa19.25■□□□□ 0.67
PRDM2-213ENST00000503842 KIF1BO60333 1816 aa19.25■□□□□ 0.67
PRDM2-213ENST00000503842 ADGRB3O60242 1522 aa19.25■□□□□ 0.67
PRDM2-213ENST00000503842 PTPRMP28827 1452 aa19.24■□□□□ 0.67
PRDM2-213ENST00000503842 L3MBTL2Q969R5 705 aa19.23■□□□□ 0.67
PRDM2-213ENST00000503842 KDM4FA0A1W2PPD8 638 aa19.2■□□□□ 0.66
PRDM2-213ENST00000503842 NLRP1Q9C000 1473 aa19.2■□□□□ 0.66
PRDM2-213ENST00000503842 TMEM131LA2VDJ0 1609 aa19.19■□□□□ 0.66
PRDM2-213ENST00000503842 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
PRDM2-213ENST00000503842 RGL3Q3MIN7 710 aa19.18■□□□□ 0.66
PRDM2-213ENST00000503842 SETD1BQ9UPS6 1966 aaKnown RBP19.17■□□□□ 0.66
PRDM2-213ENST00000503842 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
PRDM2-213ENST00000503842 KDM5AP29375 1690 aaKnown RBP19.16■□□□□ 0.66
PRDM2-213ENST00000503842 A2ML1A8K2U0 1454 aa19.16■□□□□ 0.66
PRDM2-213ENST00000503842 MYO3AQ8NEV4 1616 aa19.15■□□□□ 0.66
PRDM2-213ENST00000503842 MYO5BQ9ULV0 1848 aa19.15■□□□□ 0.66
PRDM2-213ENST00000503842 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
PRDM2-213ENST00000503842 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
PRDM2-213ENST00000503842 IFT172Q9UG01 1749 aa19.13■□□□□ 0.65
PRDM2-213ENST00000503842 UBR1Q8IWV7 1749 aa19.12■□□□□ 0.65
PRDM2-213ENST00000503842 DCAF11Q8TEB1 546 aa19.12■□□□□ 0.65
PRDM2-213ENST00000503842 STAC3Q96MF2 364 aa19.12■□□□□ 0.65
PRDM2-213ENST00000503842 NEXMIFQ5QGS0 1516 aa19.11■□□□□ 0.65
PRDM2-213ENST00000503842 MYOM2P54296 1465 aa19.11■□□□□ 0.65
PRDM2-213ENST00000503842 PPLO60437 1756 aa19.11■□□□□ 0.65
PRDM2-213ENST00000503842 ZNF326Q5BKZ1 582 aaKnown RBP19.1■□□□□ 0.65
PRDM2-213ENST00000503842 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
PRDM2-213ENST00000503842 CEP170BQ9Y4F5 1589 aaPredicted RBP19.1■□□□□ 0.65
PRDM2-213ENST00000503842 ZNF142P52746 1687 aaPredicted RBP19.09■□□□□ 0.65
PRDM2-213ENST00000503842 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
PRDM2-213ENST00000503842 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
PRDM2-213ENST00000503842 PRAG1Q86YV5 1406 aa19.08■□□□□ 0.65
PRDM2-213ENST00000503842 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.64
PRDM2-213ENST00000503842 MKRN4PQ13434 485 aaPredicted RBP19.07■□□□□ 0.64
PRDM2-213ENST00000503842 ZFYVE9O95405 1425 aa19.07■□□□□ 0.64
PRDM2-213ENST00000503842 RIMS2Q9UQ26 1411 aa19.06■□□□□ 0.64
PRDM2-213ENST00000503842 TMEM2Q9UHN6 1383 aa19.06■□□□□ 0.64
PRDM2-213ENST00000503842 ADGRF5Q8IZF2 1346 aa19.04■□□□□ 0.64
PRDM2-213ENST00000503842 ARHGAP23Q9P227 1491 aa19.04■□□□□ 0.64
PRDM2-213ENST00000503842 SLIT1O75093 1534 aa19.04■□□□□ 0.64
PRDM2-213ENST00000503842 VGFO15240 615 aaPredicted RBP19.02■□□□□ 0.64
PRDM2-213ENST00000503842 THEMISQ8N1K5 641 aaPredicted RBP19.02■□□□□ 0.64
PRDM2-213ENST00000503842 RALGAPBQ86X10 1494 aa19.02■□□□□ 0.63
PRDM2-213ENST00000503842 PIK3C2GO75747 1445 aa19.01■□□□□ 0.63
PRDM2-213ENST00000503842 ABCF1Q8NE71 845 aaKnown RBP eCLIP19■□□□□ 0.63
PRDM2-213ENST00000503842 TRPM1Q7Z4N2 1603 aa19■□□□□ 0.63
PRDM2-213ENST00000503842 NUTM2DQ5VT03 806 aaPredicted RBP18.99■□□□□ 0.63
PRDM2-213ENST00000503842 HDGFP51858 240 aaKnown RBP18.98■□□□□ 0.63
PRDM2-213ENST00000503842 KIAA1210Q9ULL0 1709 aa18.97■□□□□ 0.63
PRDM2-213ENST00000503842 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
PRDM2-213ENST00000503842 LTKP29376 864 aa18.95■□□□□ 0.62
PRDM2-213ENST00000503842 TXNDC2Q86VQ3 553 aa18.94■□□□□ 0.62
PRDM2-213ENST00000503842 C14orf93Q9H972 538 aaKnown RBP18.94■□□□□ 0.62
PRDM2-213ENST00000503842 SCAF11Q99590 1463 aaKnown RBP18.94■□□□□ 0.62
PRDM2-213ENST00000503842 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
PRDM2-213ENST00000503842 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
PRDM2-213ENST00000503842 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
PRDM2-213ENST00000503842 EID1Q9Y6B2 187 aa18.93■□□□□ 0.62
PRDM2-213ENST00000503842 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
PRDM2-213ENST00000503842 PLEKHG1Q9ULL1 1385 aa18.93■□□□□ 0.62
PRDM2-213ENST00000503842 NRXN3Q9Y4C0 1643 aa18.92■□□□□ 0.62
PRDM2-213ENST00000503842 LMTK3Q96Q04 1460 aa18.92■□□□□ 0.62
PRDM2-213ENST00000503842 LAMC1P11047 1609 aa18.92■□□□□ 0.62
PRDM2-213ENST00000503842 ALKQ9UM73 1620 aa18.9■□□□□ 0.62
PRDM2-213ENST00000503842 ADGRB1O14514 1584 aa18.89■□□□□ 0.62
PRDM2-213ENST00000503842 ANKLE2Q86XL3 938 aa18.89■□□□□ 0.61
PRDM2-213ENST00000503842 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
PRDM2-213ENST00000503842 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
PRDM2-213ENST00000503842 CARD11Q9BXL7 1154 aa18.88■□□□□ 0.61
PRDM2-213ENST00000503842 ADAMTS13Q76LX8 1427 aa18.88■□□□□ 0.61
PRDM2-213ENST00000503842 ASXL1Q8IXJ9 1541 aa18.88■□□□□ 0.61
PRDM2-213ENST00000503842 MED14O60244 1454 aa18.87■□□□□ 0.61
PRDM2-213ENST00000503842 FKBP8Q14318 412 aa18.86■□□□□ 0.61
PRDM2-213ENST00000503842 POLR1AO95602 1720 aaPredicted RBP18.85■□□□□ 0.61
PRDM2-213ENST00000503842 USP47Q96K76 1375 aa18.84■□□□□ 0.61
PRDM2-213ENST00000503842 DIP2AQ14689 1571 aa18.83■□□□□ 0.6
PRDM2-213ENST00000503842 HSPA2P54652 639 aa18.82■□□□□ 0.6
PRDM2-213ENST00000503842 EIF4G2P78344 907 aaKnown RBP eCLIP18.82■□□□□ 0.6
PRDM2-213ENST00000503842 TMEM132EQ6IEE7 984 aa18.82■□□□□ 0.6
PRDM2-213ENST00000503842 NPHP4O75161 1426 aaPredicted RBP18.82■□□□□ 0.6
PRDM2-213ENST00000503842 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
PRDM2-213ENST00000503842 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
PRDM2-213ENST00000503842 TBX22Q9Y458 520 aa18.81■□□□□ 0.6
PRDM2-213ENST00000503842 METP08581 1390 aa18.81■□□□□ 0.6
PRDM2-213ENST00000503842 BCANQ96GW7 911 aa18.8■□□□□ 0.6
PRDM2-213ENST00000503842 SPDYE4A6NLX3 237 aa18.79■□□□□ 0.6
PRDM2-213ENST00000503842 YTHDC2Q9H6S0 1430 aaKnown RBP18.79■□□□□ 0.6
PRDM2-213ENST00000503842 LRPPRCP42704 1394 aaKnown RBP18.79■□□□□ 0.6
PRDM2-213ENST00000503842 SLC26A8Q96RN1 970 aa18.78■□□□□ 0.6
PRDM2-213ENST00000503842 RBM42Q9BTD8 480 aaKnown RBP18.77■□□□□ 0.6
PRDM2-213ENST00000503842 EIF3AQ14152 1382 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms