RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 ZMYM3Q14202 1370 aa19.74■□□□□ 0.75
MACF1-223ENST00000496360 HSPA2P54652 639 aa19.74■□□□□ 0.75
MACF1-223ENST00000496360 SHANK2Q9UPX8 1470 aa19.73■□□□□ 0.75
MACF1-223ENST00000496360 NFKBIBQ15653 356 aa19.73■□□□□ 0.75
MACF1-223ENST00000496360 MPHOSPH9Q99550 1183 aa19.73■□□□□ 0.75
MACF1-223ENST00000496360 UHRF1BP1Q6BDS2 1440 aa19.72■□□□□ 0.75
MACF1-223ENST00000496360 ANKRD30BQ9BXX2 1392 aa19.72■□□□□ 0.75
MACF1-223ENST00000496360 DAPK1P53355 1430 aa19.72■□□□□ 0.75
MACF1-223ENST00000496360 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
MACF1-223ENST00000496360 BRD4O60885 1362 aaPredicted RBP19.71■□□□□ 0.75
MACF1-223ENST00000496360 DNMT1P26358 1616 aaKnown RBP19.71■□□□□ 0.75
MACF1-223ENST00000496360 GLIPR1L2Q4G1C9 344 aa19.7■□□□□ 0.74
MACF1-223ENST00000496360 NPATQ14207 1427 aa19.7■□□□□ 0.74
MACF1-223ENST00000496360 EIF5BO60841 1220 aaKnown RBP19.69■□□□□ 0.74
MACF1-223ENST00000496360 RCAN3Q9UKA8 241 aa19.69■□□□□ 0.74
MACF1-223ENST00000496360 FAM135AQ9P2D6 1515 aa19.69■□□□□ 0.74
MACF1-223ENST00000496360 EXOC6Q8TAG9 804 aa19.68■□□□□ 0.74
MACF1-223ENST00000496360 DAXXQ9UER7 740 aaPredicted RBP19.68■□□□□ 0.74
MACF1-223ENST00000496360 DUOX2Q9NRD8 1548 aa19.68■□□□□ 0.74
MACF1-223ENST00000496360 FRAT1Q92837 279 aaPredicted RBP19.67■□□□□ 0.74
MACF1-223ENST00000496360 INSRP06213 1382 aa19.67■□□□□ 0.74
MACF1-223ENST00000496360 NBPF8Q3BBV2 869 aa19.67■□□□□ 0.74
MACF1-223ENST00000496360 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
MACF1-223ENST00000496360 KIF15Q9NS87 1388 aa19.67■□□□□ 0.74
MACF1-223ENST00000496360 KDM5DQ9BY66 1539 aa19.67■□□□□ 0.74
MACF1-223ENST00000496360 EIF2AK4Q9P2K8 1649 aaKnown RBP19.67■□□□□ 0.74
MACF1-223ENST00000496360 ROCK1Q13464 1354 aa19.65■□□□□ 0.74
MACF1-223ENST00000496360 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
MACF1-223ENST00000496360 RRP7BPQ9NSQ0 103 aa19.64■□□□□ 0.73
MACF1-223ENST00000496360 RALBP1Q15311 655 aa19.63■□□□□ 0.73
MACF1-223ENST00000496360 ANKRD30AQ9BXX3 1397 aa19.62■□□□□ 0.73
MACF1-223ENST00000496360 CHIC2Q9UKJ5 165 aa19.62■□□□□ 0.73
MACF1-223ENST00000496360 ERBINQ96RT1 1412 aa19.62■□□□□ 0.73
MACF1-223ENST00000496360 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
MACF1-223ENST00000496360 PZPP20742 1482 aa19.59■□□□□ 0.73
MACF1-223ENST00000496360 MROH1Q8NDA8 1641 aa19.59■□□□□ 0.73
MACF1-223ENST00000496360 ADGRL2O95490 1459 aa19.58■□□□□ 0.73
MACF1-223ENST00000496360 ABCC3O15438 1527 aa19.58■□□□□ 0.72
MACF1-223ENST00000496360 USP47Q96K76 1375 aa19.58■□□□□ 0.72
MACF1-223ENST00000496360 MYO3AQ8NEV4 1616 aa19.57■□□□□ 0.72
MACF1-223ENST00000496360 ZC3H13Q5T200 1668 aaKnown RBP19.57■□□□□ 0.72
MACF1-223ENST00000496360 PKNOX2Q96KN3 472 aa19.56■□□□□ 0.72
MACF1-223ENST00000496360 FBXO31Q5XUX0 539 aaPredicted RBP19.56■□□□□ 0.72
MACF1-223ENST00000496360 STRCQ7RTU9 1775 aa19.55■□□□□ 0.72
MACF1-223ENST00000496360 ZNF142P52746 1687 aaPredicted RBP19.55■□□□□ 0.72
MACF1-223ENST00000496360 TNRQ92752 1358 aa19.54■□□□□ 0.72
MACF1-223ENST00000496360 CEP170BQ9Y4F5 1589 aaPredicted RBP19.54■□□□□ 0.72
MACF1-223ENST00000496360 PRDM15P57071 1507 aaPredicted RBP19.54■□□□□ 0.72
MACF1-223ENST00000496360 L1TD1Q5T7N2 865 aaKnown RBP19.53■□□□□ 0.72
MACF1-223ENST00000496360 FAM161AQ3B820 660 aa19.52■□□□□ 0.72
MACF1-223ENST00000496360 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
MACF1-223ENST00000496360 DEPDC5O75140 1603 aa19.52■□□□□ 0.71
MACF1-223ENST00000496360 CEP152O94986 1710 aa19.52■□□□□ 0.71
MACF1-223ENST00000496360 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
MACF1-223ENST00000496360 CENPQQ7L2Z9 268 aaPredicted RBP19.51■□□□□ 0.71
MACF1-223ENST00000496360 A2ML1A8K2U0 1454 aa19.51■□□□□ 0.71
MACF1-223ENST00000496360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.711e-9■■□□□ 12.2
MACF1-223ENST00000496360 KANK1Q14678 1352 aa19.49■□□□□ 0.71
MACF1-223ENST00000496360 RALGAPBQ86X10 1494 aa19.49■□□□□ 0.71
MACF1-223ENST00000496360 KDM2BQ8NHM5 1336 aa19.48■□□□□ 0.71
MACF1-223ENST00000496360 ANKRD50Q9ULJ7 1429 aa19.48■□□□□ 0.71
MACF1-223ENST00000496360 E9PCH4 1651 aa19.48■□□□□ 0.71
MACF1-223ENST00000496360 PTPRTO14522 1441 aa19.47■□□□□ 0.71
MACF1-223ENST00000496360 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
MACF1-223ENST00000496360 SPATA31D1Q6ZQQ2 1576 aa19.47■□□□□ 0.71
MACF1-223ENST00000496360 ERVK-7P63135 1459 aa19.47■□□□□ 0.71
MACF1-223ENST00000496360 PLA2R1Q13018 1463 aa19.47■□□□□ 0.71
MACF1-223ENST00000496360 NLRP1Q9C000 1473 aa19.46■□□□□ 0.71
MACF1-223ENST00000496360 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
MACF1-223ENST00000496360 VWDEQ8N2E2 1590 aa19.44■□□□□ 0.7
MACF1-223ENST00000496360 FRAT2O75474 233 aaPredicted RBP19.44■□□□□ 0.7
MACF1-223ENST00000496360 LMTK2Q8IWU2 1503 aa19.43■□□□□ 0.7
MACF1-223ENST00000496360 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
MACF1-223ENST00000496360 NCKAP5LQ9HCH0 1330 aa19.43■□□□□ 0.7
MACF1-223ENST00000496360 BLMP54132 1417 aaPredicted RBP19.42■□□□□ 0.7
MACF1-223ENST00000496360 PKD2Q13563 968 aa19.42■□□□□ 0.7
MACF1-223ENST00000496360 CFAP65Q6ZU64 1925 aaKnown RBP19.42■□□□□ 0.7
MACF1-223ENST00000496360 PARD3Q8TEW0 1356 aa19.42■□□□□ 0.7
MACF1-223ENST00000496360 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
MACF1-223ENST00000496360 DCAF11Q8TEB1 546 aa19.42■□□□□ 0.7
MACF1-223ENST00000496360 CRBNQ96SW2 442 aa19.42■□□□□ 0.7
MACF1-223ENST00000496360 FOXD1Q16676 465 aa19.41■□□□□ 0.7
MACF1-223ENST00000496360 C8orf34Q49A92 452 aa19.41■□□□□ 0.7
MACF1-223ENST00000496360 RRP9O43818 475 aaKnown RBP19.4■□□□□ 0.7
MACF1-223ENST00000496360 UGGT1Q9NYU2 1555 aa19.39■□□□□ 0.7
MACF1-223ENST00000496360 THEMISQ8N1K5 641 aaPredicted RBP19.39■□□□□ 0.69
MACF1-223ENST00000496360 EFCAB6Q5THR3 1501 aa19.37■□□□□ 0.69
MACF1-223ENST00000496360 UNC13BO14795 1591 aa19.36■□□□□ 0.69
MACF1-223ENST00000496360 SLC4A3P48751 1232 aa19.36■□□□□ 0.69
MACF1-223ENST00000496360 CERKQ8TCT0 537 aa19.36■□□□□ 0.69
MACF1-223ENST00000496360 BECN1Q14457 450 aa19.35■□□□□ 0.69
MACF1-223ENST00000496360 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.35■□□□□ 0.69
MACF1-223ENST00000496360 FBXO41Q8TF61 875 aa19.35■□□□□ 0.69
MACF1-223ENST00000496360 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
MACF1-223ENST00000496360 CLCN1P35523 988 aa19.34■□□□□ 0.69
MACF1-223ENST00000496360 EIF3AQ14152 1382 aaKnown RBP19.33■□□□□ 0.69
MACF1-223ENST00000496360 ANKLE2Q86XL3 938 aa19.33■□□□□ 0.69
MACF1-223ENST00000496360 VIRMAQ69YN4 1812 aaKnown RBP19.33■□□□□ 0.68
MACF1-223ENST00000496360 RRAGDQ9NQL2 400 aaPredicted RBP19.32■□□□□ 0.68
MACF1-223ENST00000496360 TET3O43151 1660 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms