RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 MED14O60244 1454 aa18.29■□□□□ 0.52
TRA2A-209ENST00000494255 LTKP29376 864 aa18.29■□□□□ 0.52
TRA2A-209ENST00000494255 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
TRA2A-209ENST00000494255 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
TRA2A-209ENST00000494255 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
TRA2A-209ENST00000494255 ANKRD30BQ9BXX2 1392 aa18.27■□□□□ 0.52
TRA2A-209ENST00000494255 ZFYVE9O95405 1425 aa18.27■□□□□ 0.52
TRA2A-209ENST00000494255 BCANQ96GW7 911 aa18.24■□□□□ 0.51
TRA2A-209ENST00000494255 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
TRA2A-209ENST00000494255 RPGRIP1LQ68CZ1 1315 aa18.22■□□□□ 0.51
TRA2A-209ENST00000494255 PLEKHG1Q9ULL1 1385 aa18.22■□□□□ 0.51
TRA2A-209ENST00000494255 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
TRA2A-209ENST00000494255 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
TRA2A-209ENST00000494255 SPATA31E1Q6ZUB1 1445 aa18.21■□□□□ 0.5
TRA2A-209ENST00000494255 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
TRA2A-209ENST00000494255 PPLO60437 1756 aa18.18■□□□□ 0.5
TRA2A-209ENST00000494255 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
TRA2A-209ENST00000494255 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
TRA2A-209ENST00000494255 SLC26A8Q96RN1 970 aa18.16■□□□□ 0.5
TRA2A-209ENST00000494255 ZNF335Q9H4Z2 1342 aaPredicted RBP18.16■□□□□ 0.5
TRA2A-209ENST00000494255 DIP2AQ14689 1571 aa18.13■□□□□ 0.49
TRA2A-209ENST00000494255 IFT172Q9UG01 1749 aa18.13■□□□□ 0.49
TRA2A-209ENST00000494255 SETBP1Q9Y6X0 1596 aa18.13■□□□□ 0.49
TRA2A-209ENST00000494255 TBX22Q9Y458 520 aa18.12■□□□□ 0.49
TRA2A-209ENST00000494255 ADAMTS13Q76LX8 1427 aa18.11■□□□□ 0.49
TRA2A-209ENST00000494255 LTBP4Q8N2S1 1624 aa18.11■□□□□ 0.49
TRA2A-209ENST00000494255 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
TRA2A-209ENST00000494255 CPS1P31327 1500 aa18.09■□□□□ 0.49
TRA2A-209ENST00000494255 ADGRF5Q8IZF2 1346 aa18.08■□□□□ 0.49
TRA2A-209ENST00000494255 MYOM2P54296 1465 aa18.08■□□□□ 0.49
TRA2A-209ENST00000494255 NEUROD1Q13562 356 aa18.08■□□□□ 0.48
TRA2A-209ENST00000494255 SIN3AQ96ST3 1273 aa18.08■□□□□ 0.48
TRA2A-209ENST00000494255 KCNA6P17658 529 aa18.07■□□□□ 0.48
TRA2A-209ENST00000494255 CERKQ8TCT0 537 aa18.07■□□□□ 0.48
TRA2A-209ENST00000494255 DCAF11Q8TEB1 546 aa18.07■□□□□ 0.48
TRA2A-209ENST00000494255 PIK3R4Q99570 1358 aa18.07■□□□□ 0.48
TRA2A-209ENST00000494255 STRCP1A6NGW2 1772 aa18.07■□□□□ 0.48
TRA2A-209ENST00000494255 STAC3Q96MF2 364 aa18.06■□□□□ 0.48
TRA2A-209ENST00000494255 KDM2AQ9Y2K7 1162 aa18.06■□□□□ 0.48
TRA2A-209ENST00000494255 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
TRA2A-209ENST00000494255 ALKQ9UM73 1620 aa18.05■□□□□ 0.48
TRA2A-209ENST00000494255 NWD1Q149M9 1564 aa18.04■□□□□ 0.48
TRA2A-209ENST00000494255 PIK3C2GO75747 1445 aa18.03■□□□□ 0.48
TRA2A-209ENST00000494255 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
TRA2A-209ENST00000494255 NKTRP30414 1462 aaKnown RBP18.02■□□□□ 0.48
TRA2A-209ENST00000494255 METP08581 1390 aa18.02■□□□□ 0.48
TRA2A-209ENST00000494255 SETD1AO15047 1707 aaKnown RBP18.02■□□□□ 0.47
TRA2A-209ENST00000494255 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
TRA2A-209ENST00000494255 LRRC7Q96NW7 1537 aa18■□□□□ 0.47
TRA2A-209ENST00000494255 PROSER2Q86WR7 435 aaPredicted RBP18■□□□□ 0.47
TRA2A-209ENST00000494255 LAMC1P11047 1609 aa18■□□□□ 0.47
TRA2A-209ENST00000494255 AMOTL2Q9Y2J4 779 aa17.99■□□□□ 0.47
TRA2A-209ENST00000494255 PTPRUQ92729 1446 aa17.99■□□□□ 0.47
TRA2A-209ENST00000494255 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
TRA2A-209ENST00000494255 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
TRA2A-209ENST00000494255 CCER1Q8TC90 406 aaPredicted RBP17.98■□□□□ 0.47
TRA2A-209ENST00000494255 C14orf93Q9H972 538 aaKnown RBP17.98■□□□□ 0.47
TRA2A-209ENST00000494255 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
TRA2A-209ENST00000494255 XRN1Q8IZH2 1706 aaKnown RBP17.97■□□□□ 0.47
TRA2A-209ENST00000494255 CFAP70Q5T0N1 1121 aa17.96■□□□□ 0.47
TRA2A-209ENST00000494255 TMEM94Q12767 1356 aa17.95■□□□□ 0.46
TRA2A-209ENST00000494255 TMEM132EQ6IEE7 984 aa17.93■□□□□ 0.46
TRA2A-209ENST00000494255 XIRP1Q702N8 1843 aaKnown RBP17.93■□□□□ 0.46
TRA2A-209ENST00000494255 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
TRA2A-209ENST00000494255 PRAG1Q86YV5 1406 aa17.93■□□□□ 0.46
TRA2A-209ENST00000494255 C14orf37Q86TY3 774 aa17.92■□□□□ 0.46
TRA2A-209ENST00000494255 RBM33Q96EV2 1170 aaKnown RBP17.92■□□□□ 0.46
TRA2A-209ENST00000494255 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
TRA2A-209ENST00000494255 NCOA3Q9Y6Q9 1424 aa17.91■□□□□ 0.46
TRA2A-209ENST00000494255 STK26Q9P289 416 aa17.91■□□□□ 0.46
TRA2A-209ENST00000494255 PTCH1Q13635 1447 aa17.91■□□□□ 0.46
TRA2A-209ENST00000494255 YTHDC2Q9H6S0 1430 aaKnown RBP17.91■□□□□ 0.46
TRA2A-209ENST00000494255 KIAA1210Q9ULL0 1709 aa17.9■□□□□ 0.46
TRA2A-209ENST00000494255 FBXO41Q8TF61 875 aa17.9■□□□□ 0.46
TRA2A-209ENST00000494255 MSH6P52701 1360 aa17.89■□□□□ 0.45
TRA2A-209ENST00000494255 UBAP1LF5GYI3 381 aa17.89■□□□□ 0.45
TRA2A-209ENST00000494255 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
TRA2A-209ENST00000494255 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.45
TRA2A-209ENST00000494255 TOM1O60784 492 aa17.88■□□□□ 0.45
TRA2A-209ENST00000494255 TECPR2O15040 1411 aa17.88■□□□□ 0.45
TRA2A-209ENST00000494255 ADGRB1O14514 1584 aa17.88■□□□□ 0.45
TRA2A-209ENST00000494255 ROBO2Q9HCK4 1378 aa17.87■□□□□ 0.45
TRA2A-209ENST00000494255 C19orf44Q9H6X5 657 aa17.84■□□□□ 0.45
TRA2A-209ENST00000494255 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
TRA2A-209ENST00000494255 TRPM1Q7Z4N2 1603 aa17.83■□□□□ 0.45
TRA2A-209ENST00000494255 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.44
TRA2A-209ENST00000494255 ADGRL3Q9HAR2 1447 aa17.83■□□□□ 0.44
TRA2A-209ENST00000494255 SIRT1Q96EB6 747 aa17.83■□□□□ 0.44
TRA2A-209ENST00000494255 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
TRA2A-209ENST00000494255 DLC1Q96QB1 1528 aa17.83■□□□□ 0.44
TRA2A-209ENST00000494255 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.82■□□□□ 0.44
TRA2A-209ENST00000494255 ATF3P18847 181 aa17.82■□□□□ 0.44
TRA2A-209ENST00000494255 NBPF1Q3BBV0 1214 aa17.82■□□□□ 0.44
TRA2A-209ENST00000494255 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
TRA2A-209ENST00000494255 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
TRA2A-209ENST00000494255 NBPF8Q3BBV2 869 aa17.81■□□□□ 0.44
TRA2A-209ENST00000494255 WAPLQ7Z5K2 1190 aa17.81■□□□□ 0.44
TRA2A-209ENST00000494255 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
TRA2A-209ENST00000494255 PIP4K2BP78356 416 aa17.8■□□□□ 0.44
TRA2A-209ENST00000494255 POGKQ9P215 609 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms