RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
EPHB4-206ENST00000487222 GOLGA6L1Q8N7Z2 621 aa18.05■□□□□ 0.48
EPHB4-206ENST00000487222 NOC3LQ8WTT2 800 aaKnown RBP18.05■□□□□ 0.48
EPHB4-206ENST00000487222 FAM184AQ8NB25 1140 aa18.05■□□□□ 0.48
EPHB4-206ENST00000487222 ANKRD50Q9ULJ7 1429 aa18.04■□□□□ 0.48
EPHB4-206ENST00000487222 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
EPHB4-206ENST00000487222 DIAPH3Q9NSV4 1193 aa18.04■□□□□ 0.48
EPHB4-206ENST00000487222 RUFY2Q8WXA3 655 aa18.04■□□□□ 0.48
EPHB4-206ENST00000487222 FYCO1Q9BQS8 1478 aa18.04■□□□□ 0.48
EPHB4-206ENST00000487222 GOLGA6L19H0YKK7 550 aa18.04■□□□□ 0.48
EPHB4-206ENST00000487222 RIPK4P57078 832 aa18.04■□□□□ 0.48
EPHB4-206ENST00000487222 TOMM22Q9NS69 142 aa18.04■□□□□ 0.48
EPHB4-206ENST00000487222 TPM3P06753 285 aa18.03■□□□□ 0.48
EPHB4-206ENST00000487222 TNNT3P45378 269 aaPredicted RBP18.03■□□□□ 0.48
EPHB4-206ENST00000487222 NCOA2Q15596 1464 aa18.03■□□□□ 0.48
EPHB4-206ENST00000487222 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
EPHB4-206ENST00000487222 BECN2A8MW95 431 aa18.02■□□□□ 0.48
EPHB4-206ENST00000487222 ROCK1Q13464 1354 aa18.02■□□□□ 0.47
EPHB4-206ENST00000487222 ZKSCAN1P17029 563 aaPredicted RBP18.01■□□□□ 0.47
EPHB4-206ENST00000487222 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
EPHB4-206ENST00000487222 ERICH3Q5RHP9 1530 aa18.01■□□□□ 0.47
EPHB4-206ENST00000487222 TEFQ10587 303 aa18.01■□□□□ 0.47
EPHB4-206ENST00000487222 FOXD4L6Q3SYB3 417 aaPredicted RBP18.01■□□□□ 0.47
EPHB4-206ENST00000487222 FOXD4L3Q6VB84 417 aaPredicted RBP18.01■□□□□ 0.47
EPHB4-206ENST00000487222 GRIN2BQ13224 1484 aa18■□□□□ 0.47
EPHB4-206ENST00000487222 WASHC2AQ641Q2 1341 aa18■□□□□ 0.47
EPHB4-206ENST00000487222 CFTRP13569 1480 aa17.99■□□□□ 0.47
EPHB4-206ENST00000487222 C1orf141Q5JVX7 400 aa17.99■□□□□ 0.47
EPHB4-206ENST00000487222 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
EPHB4-206ENST00000487222 CCDC9Q9Y3X0 531 aaKnown RBP17.99■□□□□ 0.47
EPHB4-206ENST00000487222 NUCB2P80303 420 aa17.99■□□□□ 0.47
EPHB4-206ENST00000487222 NEXNQ0ZGT2 675 aa17.98■□□□□ 0.47
EPHB4-206ENST00000487222 LRRFIP1Q32MZ4 808 aaKnown RBP17.98■□□□□ 0.47
EPHB4-206ENST00000487222 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
EPHB4-206ENST00000487222 TMX4Q9H1E5 349 aaPredicted RBP17.97■□□□□ 0.47
EPHB4-206ENST00000487222 GNAI1P63096 354 aa17.97■□□□□ 0.47
EPHB4-206ENST00000487222 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
EPHB4-206ENST00000487222 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
EPHB4-206ENST00000487222 C9orf78Q9NZ63 289 aaPredicted RBP17.97■□□□□ 0.47
EPHB4-206ENST00000487222 CPLX2Q6PUV4 134 aaKnown RBP17.96■□□□□ 0.47
EPHB4-206ENST00000487222 NFKBIBQ15653 356 aa17.96■□□□□ 0.47
EPHB4-206ENST00000487222 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.95■□□□□ 0.46
EPHB4-206ENST00000487222 LNPKQ9C0E8 428 aa17.95■□□□□ 0.46
EPHB4-206ENST00000487222 ANO2Q9NQ90 1003 aa17.95■□□□□ 0.46
EPHB4-206ENST00000487222 FRAT2O75474 233 aaPredicted RBP17.95■□□□□ 0.46
EPHB4-206ENST00000487222 IFIT2P09913 472 aaKnown RBP17.94■□□□□ 0.46
EPHB4-206ENST00000487222 PRDM2Q13029 1718 aa17.94■□□□□ 0.46
EPHB4-206ENST00000487222 MCTP1Q6DN14 999 aa17.94■□□□□ 0.46
EPHB4-206ENST00000487222 EIF2S2P20042 333 aaKnown RBP17.93■□□□□ 0.46
EPHB4-206ENST00000487222 FAM69CQ0P6D2 419 aa17.93■□□□□ 0.46
EPHB4-206ENST00000487222 TPD52L1Q16890 204 aaPredicted RBP17.93■□□□□ 0.46
EPHB4-206ENST00000487222 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
EPHB4-206ENST00000487222 RNF20Q5VTR2 975 aa17.93■□□□□ 0.46
EPHB4-206ENST00000487222 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
EPHB4-206ENST00000487222 GTF2E1P29083 439 aaPredicted RBP17.93■□□□□ 0.46
EPHB4-206ENST00000487222 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
EPHB4-206ENST00000487222 AKAP17AQ02040 695 aaKnown RBP17.92■□□□□ 0.46
EPHB4-206ENST00000487222 TSR1Q2NL82 804 aaKnown RBP17.92■□□□□ 0.46
EPHB4-206ENST00000487222 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
EPHB4-206ENST00000487222 SYNJ1O43426 1573 aa17.92■□□□□ 0.46
EPHB4-206ENST00000487222 SYNE3Q6ZMZ3 975 aa17.92■□□□□ 0.46
EPHB4-206ENST00000487222 TPM1P09493 284 aa17.91■□□□□ 0.46
EPHB4-206ENST00000487222 A0A0U1RQG5 324 aaPredicted RBP17.9■□□□□ 0.46
EPHB4-206ENST00000487222 HSP90AB4PQ58FF6 505 aa17.9■□□□□ 0.46
EPHB4-206ENST00000487222 MARCH6O60337 910 aa17.9■□□□□ 0.46
EPHB4-206ENST00000487222 PES1O00541 588 aaKnown RBP17.9■□□□□ 0.46
EPHB4-206ENST00000487222 DDX58O95786 925 aaKnown RBP17.9■□□□□ 0.46
EPHB4-206ENST00000487222 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
EPHB4-206ENST00000487222 SYNJ2O15056 1496 aa17.89■□□□□ 0.46
EPHB4-206ENST00000487222 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.89■□□□□ 0.45
EPHB4-206ENST00000487222 TTC5Q8N0Z6 440 aa17.89■□□□□ 0.45
EPHB4-206ENST00000487222 SMC3Q9UQE7 1217 aa17.89■□□□□ 0.45
EPHB4-206ENST00000487222 FAM43AQ8N2R8 423 aa17.89■□□□□ 0.45
EPHB4-206ENST00000487222 PRXQ9BXM0 1461 aa17.89■□□□□ 0.45
EPHB4-206ENST00000487222 CDC45O75419 566 aa17.89■□□□□ 0.45
EPHB4-206ENST00000487222 BICD2Q8TD16 824 aa17.89■□□□□ 0.45
EPHB4-206ENST00000487222 MRE11P49959 708 aa17.88■□□□□ 0.45
EPHB4-206ENST00000487222 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
EPHB4-206ENST00000487222 CPLX1O14810 134 aa17.87■□□□□ 0.45
EPHB4-206ENST00000487222 CDCA7LQ96GN5 454 aa17.87■□□□□ 0.45
EPHB4-206ENST00000487222 TRIM29Q14134 588 aa17.87■□□□□ 0.45
EPHB4-206ENST00000487222 VSIG10Q8N0Z9 540 aa17.87■□□□□ 0.45
EPHB4-206ENST00000487222 CCAR2Q8N163 923 aaKnown RBP17.87■□□□□ 0.45
EPHB4-206ENST00000487222 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
EPHB4-206ENST00000487222 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
EPHB4-206ENST00000487222 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
EPHB4-206ENST00000487222 VPS37CA5D8V6 355 aaPredicted RBP17.86■□□□□ 0.45
EPHB4-206ENST00000487222 GPS2Q13227 327 aa17.86■□□□□ 0.45
EPHB4-206ENST00000487222 CEP89Q96ST8 783 aa17.86■□□□□ 0.45
EPHB4-206ENST00000487222 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
EPHB4-206ENST00000487222 ERC2O15083 957 aa17.86■□□□□ 0.45
EPHB4-206ENST00000487222 TCP11L2Q8N4U5 519 aa17.86■□□□□ 0.45
EPHB4-206ENST00000487222 ZNF592Q92610 1267 aa17.86■□□□□ 0.45
EPHB4-206ENST00000487222 GGNBP2Q9H3C7 697 aa17.86■□□□□ 0.45
EPHB4-206ENST00000487222 PRG4Q92954 1404 aaPredicted RBP17.85■□□□□ 0.45
EPHB4-206ENST00000487222 G3V3G9 751 aa17.85■□□□□ 0.45
EPHB4-206ENST00000487222 DCAF8Q5TAQ9 597 aa17.85■□□□□ 0.45
EPHB4-206ENST00000487222 TPM2P07951 284 aa17.84■□□□□ 0.45
EPHB4-206ENST00000487222 HMOX1P09601 288 aa17.84■□□□□ 0.45
EPHB4-206ENST00000487222 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms