RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 DHX37Q8IY37 1157 aaKnown RBP8.13□□□□□ -1.11
SF1-217ENST00000486960 CNTLNQ9NXG0 1405 aa8.12□□□□□ -1.11
SF1-217ENST00000486960 PSDA5PKW4 1024 aaPredicted RBP8.12□□□□□ -1.11
SF1-217ENST00000486960 FAM9AQ8IZU1 332 aaPredicted RBP8.12□□□□□ -1.11
SF1-217ENST00000486960 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
SF1-217ENST00000486960 ZBTB12Q9Y330 459 aaPredicted RBP8.12□□□□□ -1.11
SF1-217ENST00000486960 MED14O60244 1454 aa8.12□□□□□ -1.11
SF1-217ENST00000486960 ZMYM3Q14202 1370 aa8.11□□□□□ -1.11
SF1-217ENST00000486960 RGL2O15211 777 aa8.11□□□□□ -1.11
SF1-217ENST00000486960 NPHP4O75161 1426 aaPredicted RBP8.11□□□□□ -1.11
SF1-217ENST00000486960 APBB1O00213 710 aa8.1□□□□□ -1.11
SF1-217ENST00000486960 NEFLP07196 543 aa8.1□□□□□ -1.11
SF1-217ENST00000486960 BCL11AQ9H165 835 aa8.1□□□□□ -1.11
SF1-217ENST00000486960 PLCH2O75038 1416 aa8.1□□□□□ -1.11
SF1-217ENST00000486960 NWD1Q149M9 1564 aa8.1□□□□□ -1.11
SF1-217ENST00000486960 CARMIL1Q5VZK9 1371 aa8.1□□□□□ -1.11
SF1-217ENST00000486960 MAP3K1Q13233 1512 aa8.09□□□□□ -1.11
SF1-217ENST00000486960 AFF2P51816 1311 aa8.09□□□□□ -1.11
SF1-217ENST00000486960 RBM25P49756 843 aaKnown RBP8.09□□□□□ -1.11
SF1-217ENST00000486960 MEX3CQ5U5Q3 659 aaKnown RBP8.09□□□□□ -1.11
SF1-217ENST00000486960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.09□□□□□ -1.11
SF1-217ENST00000486960 CHD4Q14839 1912 aa8.09□□□□□ -1.11
SF1-217ENST00000486960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.09□□□□□ -1.12
SF1-217ENST00000486960 ABCC1P33527 1531 aa8.08□□□□□ -1.12
SF1-217ENST00000486960 DEFB132Q7Z7B7 95 aa8.08□□□□□ -1.12
SF1-217ENST00000486960 DIP2AQ14689 1571 aa8.07□□□□□ -1.12
SF1-217ENST00000486960 MTMR7Q9Y216 660 aa8.07□□□□□ -1.12
SF1-217ENST00000486960 CTTNBP2Q8WZ74 1663 aa8.07□□□□□ -1.12
SF1-217ENST00000486960 SPOCK2Q92563 424 aa8.06□□□□□ -1.12
SF1-217ENST00000486960 KIDINS220Q9ULH0 1771 aa8.06□□□□□ -1.12
SF1-217ENST00000486960 SPATA31A6Q5VVP1 1343 aa8.05□□□□□ -1.12
SF1-217ENST00000486960 RBM6P78332 1123 aaKnown RBP8.05□□□□□ -1.12
SF1-217ENST00000486960 TMCO4Q5TGY1 634 aa8.05□□□□□ -1.12
SF1-217ENST00000486960 BRWD3Q6RI45 1802 aa8.04□□□□□ -1.12
SF1-217ENST00000486960 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
SF1-217ENST00000486960 SCAF11Q99590 1463 aaKnown RBP8.04□□□□□ -1.12
SF1-217ENST00000486960 PCNTO95613 3336 aa8.04□□□□□ -1.12
SF1-217ENST00000486960 SPDYE4A6NLX3 237 aa8.03□□□□□ -1.12
SF1-217ENST00000486960 E9PSI1 815 aa8.03□□□□□ -1.12
SF1-217ENST00000486960 P3H3Q8IVL6 736 aa8.03□□□□□ -1.12
SF1-217ENST00000486960 TRAIPQ9BWF2 469 aa8.03□□□□□ -1.12
SF1-217ENST00000486960 QTRT2Q9H974 415 aaKnown RBP8.03□□□□□ -1.12
SF1-217ENST00000486960 BCCIPQ9P287 314 aaKnown RBP eCLIP8.03□□□□□ -1.12
SF1-217ENST00000486960 FGD6Q6ZV73 1430 aa8.03□□□□□ -1.12
SF1-217ENST00000486960 ZNF518AQ6AHZ1 1483 aa8.02□□□□□ -1.13
SF1-217ENST00000486960 AFAP1Q8N556 730 aa8.02□□□□□ -1.13
SF1-217ENST00000486960 USP35Q9P2H5 1018 aa8.02□□□□□ -1.13
SF1-217ENST00000486960 MYO5CQ9NQX4 1742 aa8□□□□□ -1.13
SF1-217ENST00000486960 LRRC9Q6ZRR7 1453 aa8□□□□□ -1.13
SF1-217ENST00000486960 AEBP1Q8IUX7 1158 aa8□□□□□ -1.13
SF1-217ENST00000486960 PROM2Q8N271 834 aa8□□□□□ -1.13
SF1-217ENST00000486960 RTEL1-TNFRSF6BF6WH68 1400 aa8□□□□□ -1.13
SF1-217ENST00000486960 KIF27Q86VH2 1401 aa8□□□□□ -1.13
SF1-217ENST00000486960 NUP153P49790 1475 aaKnown RBP8□□□□□ -1.13
SF1-217ENST00000486960 KIF14Q15058 1648 aa8□□□□□ -1.13
SF1-217ENST00000486960 AHDC1Q5TGY3 1603 aaPredicted RBP8□□□□□ -1.13
SF1-217ENST00000486960 KDM5DQ9BY66 1539 aa7.99□□□□□ -1.13
SF1-217ENST00000486960 MFAP1P55081 439 aaKnown RBP7.99□□□□□ -1.13
SF1-217ENST00000486960 TIAM1Q13009 1591 aa7.99□□□□□ -1.13
SF1-217ENST00000486960 FOXD4L5Q5VV16 416 aaPredicted RBP7.99□□□□□ -1.13
SF1-217ENST00000486960 FOXD4L4Q8WXT5 416 aaPredicted RBP7.99□□□□□ -1.13
SF1-217ENST00000486960 SLC24A3Q9HC58 644 aa7.99□□□□□ -1.13
SF1-217ENST00000486960 MLH3Q9UHC1 1453 aa7.99□□□□□ -1.13
SF1-217ENST00000486960 BLMP54132 1417 aaPredicted RBP7.98□□□□□ -1.13
SF1-217ENST00000486960 RSPH4AQ5TD94 716 aa7.98□□□□□ -1.13
SF1-217ENST00000486960 ANKLE2Q86XL3 938 aa7.98□□□□□ -1.13
SF1-217ENST00000486960 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
SF1-217ENST00000486960 ATP7AQ04656 1500 aa7.98□□□□□ -1.13
SF1-217ENST00000486960 TMEM94Q12767 1356 aa7.97□□□□□ -1.13
SF1-217ENST00000486960 GOLGB1Q14789 3259 aaKnown RBP7.97□□□□□ -1.13
SF1-217ENST00000486960 PRELPP51888 382 aa7.97□□□□□ -1.13
SF1-217ENST00000486960 ZC3H15Q8WU90 426 aaKnown RBP7.97□□□□□ -1.13
SF1-217ENST00000486960 ZNF428Q96B54 188 aa7.97□□□□□ -1.13
SF1-217ENST00000486960 GOLGA3Q08378 1498 aa7.97□□□□□ -1.13
SF1-217ENST00000486960 COL13A1Q5TAT6 717 aaPredicted RBP7.96□□□□□ -1.14
SF1-217ENST00000486960 KDM5AP29375 1690 aaKnown RBP7.95□□□□□ -1.14
SF1-217ENST00000486960 UGGT1Q9NYU2 1555 aa7.95□□□□□ -1.14
SF1-217ENST00000486960 MAST1Q9Y2H9 1570 aa7.94□□□□□ -1.14
SF1-217ENST00000486960 FAM177A1Q8N128 213 aaPredicted RBP7.94□□□□□ -1.14
SF1-217ENST00000486960 RBM42Q9BTD8 480 aaKnown RBP7.94□□□□□ -1.14
SF1-217ENST00000486960 PLXNC1O60486 1568 aa7.93□□□□□ -1.14
SF1-217ENST00000486960 R3HDM1Q15032 1099 aaKnown RBP7.93□□□□□ -1.14
SF1-217ENST00000486960 FBXO31Q5XUX0 539 aaPredicted RBP7.93□□□□□ -1.14
SF1-217ENST00000486960 HS6ST3Q8IZP7 471 aa7.93□□□□□ -1.14
SF1-217ENST00000486960 CCDC82Q8N4S0 544 aa7.93□□□□□ -1.14
SF1-217ENST00000486960 C8orf37Q96NL8 207 aa7.93□□□□□ -1.14
SF1-217ENST00000486960 SHANK3Q9BYB0 1731 aa7.92□□□□□ -1.14
SF1-217ENST00000486960 CDC42BPBQ9Y5S2 1711 aa7.92□□□□□ -1.14
SF1-217ENST00000486960 GZF1Q9H116 711 aaPredicted RBP7.92□□□□□ -1.14
SF1-217ENST00000486960 TNRQ92752 1358 aa7.92□□□□□ -1.14
SF1-217ENST00000486960 UNC13BO14795 1591 aa7.92□□□□□ -1.14
SF1-217ENST00000486960 PPM1GO15355 546 aaPredicted RBP7.91□□□□□ -1.14
SF1-217ENST00000486960 CLSTN1O94985 981 aa7.91□□□□□ -1.14
SF1-217ENST00000486960 WDR70Q9NW82 654 aa7.91□□□□□ -1.14
SF1-217ENST00000486960 ATRNO75882 1429 aa7.91□□□□□ -1.14
SF1-217ENST00000486960 SPHKAPQ2M3C7 1700 aa7.9□□□□□ -1.14
SF1-217ENST00000486960 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.14
SF1-217ENST00000486960 NGLY1Q96IV0 654 aa7.9□□□□□ -1.14
SF1-217ENST00000486960 PSMD1Q99460 953 aa7.9□□□□□ -1.14
SF1-217ENST00000486960 SLAIN2Q9P270 581 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms