RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 NEXMIFQ5QGS0 1516 aa19.22■□□□□ 0.67
HDAC1-208ENST00000482310 SPATA31E1Q6ZUB1 1445 aa19.22■□□□□ 0.67
HDAC1-208ENST00000482310 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
HDAC1-208ENST00000482310 RIMS2Q9UQ26 1411 aa19.21■□□□□ 0.67
HDAC1-208ENST00000482310 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
HDAC1-208ENST00000482310 ILDR2Q71H61 639 aa19.2■□□□□ 0.66
HDAC1-208ENST00000482310 SLIT1O75093 1534 aa19.2■□□□□ 0.66
HDAC1-208ENST00000482310 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
HDAC1-208ENST00000482310 IQGAP1P46940 1657 aa19.18■□□□□ 0.66
HDAC1-208ENST00000482310 NEURL4Q96JN8 1562 aa19.18■□□□□ 0.66
HDAC1-208ENST00000482310 ARHGAP23Q9P227 1491 aa19.17■□□□□ 0.66
HDAC1-208ENST00000482310 PPP1R15AO75807 674 aaPredicted RBP19.17■□□□□ 0.66
HDAC1-208ENST00000482310 NCKAP5LQ9HCH0 1330 aa19.17■□□□□ 0.66
HDAC1-208ENST00000482310 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
HDAC1-208ENST00000482310 SCAF11Q99590 1463 aaKnown RBP19.16■□□□□ 0.66
HDAC1-208ENST00000482310 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
HDAC1-208ENST00000482310 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
HDAC1-208ENST00000482310 TONSLQ96HA7 1378 aa19.15■□□□□ 0.66
HDAC1-208ENST00000482310 LTKP29376 864 aa19.14■□□□□ 0.65
HDAC1-208ENST00000482310 EID1Q9Y6B2 187 aa19.14■□□□□ 0.65
HDAC1-208ENST00000482310 ANKLE2Q86XL3 938 aa19.13■□□□□ 0.65
HDAC1-208ENST00000482310 BCANQ96GW7 911 aa19.13■□□□□ 0.65
HDAC1-208ENST00000482310 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
HDAC1-208ENST00000482310 DCAF11Q8TEB1 546 aa19.12■□□□□ 0.65
HDAC1-208ENST00000482310 NRXN3Q9Y4C0 1643 aa19.11■□□□□ 0.65
HDAC1-208ENST00000482310 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
HDAC1-208ENST00000482310 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.09■□□□□ 0.65
HDAC1-208ENST00000482310 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
HDAC1-208ENST00000482310 NPHP4O75161 1426 aaPredicted RBP19.08■□□□□ 0.65
HDAC1-208ENST00000482310 RPGRIP1LQ68CZ1 1315 aa19.08■□□□□ 0.65
HDAC1-208ENST00000482310 ADGRF5Q8IZF2 1346 aa19.08■□□□□ 0.65
HDAC1-208ENST00000482310 MYOM2P54296 1465 aa19.08■□□□□ 0.64
HDAC1-208ENST00000482310 ZNF335Q9H4Z2 1342 aaPredicted RBP19.07■□□□□ 0.64
HDAC1-208ENST00000482310 HDGFP51858 240 aaKnown RBP19.07■□□□□ 0.64
HDAC1-208ENST00000482310 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
HDAC1-208ENST00000482310 VGFO15240 615 aaPredicted RBP19.05■□□□□ 0.64
HDAC1-208ENST00000482310 SETBP1Q9Y6X0 1596 aa19.05■□□□□ 0.64
HDAC1-208ENST00000482310 PLEKHG1Q9ULL1 1385 aa19.05■□□□□ 0.64
HDAC1-208ENST00000482310 IQSEC2Q5JU85 1478 aa19.04■□□□□ 0.64
HDAC1-208ENST00000482310 MED14O60244 1454 aa19.03■□□□□ 0.64
HDAC1-208ENST00000482310 SLC26A8Q96RN1 970 aa19.03■□□□□ 0.64
HDAC1-208ENST00000482310 LAMC1P11047 1609 aa19.03■□□□□ 0.64
HDAC1-208ENST00000482310 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
HDAC1-208ENST00000482310 PIK3C2GO75747 1445 aa19.02■□□□□ 0.64
HDAC1-208ENST00000482310 TRPM1Q7Z4N2 1603 aa19.01■□□□□ 0.63
HDAC1-208ENST00000482310 NRXN1Q9ULB1 1477 aa19.01■□□□□ 0.63
HDAC1-208ENST00000482310 DIP2AQ14689 1571 aa19■□□□□ 0.63
HDAC1-208ENST00000482310 STRCP1A6NGW2 1772 aa19■□□□□ 0.63
HDAC1-208ENST00000482310 ADAMTS13Q76LX8 1427 aa19■□□□□ 0.63
HDAC1-208ENST00000482310 PRAG1Q86YV5 1406 aa19■□□□□ 0.63
HDAC1-208ENST00000482310 CHD2O14647 1828 aaKnown RBP18.99■□□□□ 0.63
HDAC1-208ENST00000482310 KIAA1210Q9ULL0 1709 aa18.99■□□□□ 0.63
HDAC1-208ENST00000482310 SOCS7O14512 581 aa18.98■□□□□ 0.63
HDAC1-208ENST00000482310 ASXL1Q8IXJ9 1541 aa18.96■□□□□ 0.63
HDAC1-208ENST00000482310 CFAP70Q5T0N1 1121 aa18.96■□□□□ 0.63
HDAC1-208ENST00000482310 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
HDAC1-208ENST00000482310 METP08581 1390 aa18.93■□□□□ 0.62
HDAC1-208ENST00000482310 TMEM132EQ6IEE7 984 aa18.93■□□□□ 0.62
HDAC1-208ENST00000482310 UBAP1LF5GYI3 381 aa18.92■□□□□ 0.62
HDAC1-208ENST00000482310 XRN1Q8IZH2 1706 aaKnown RBP18.91■□□□□ 0.62
HDAC1-208ENST00000482310 STAC3Q96MF2 364 aa18.91■□□□□ 0.62
HDAC1-208ENST00000482310 C14orf93Q9H972 538 aaKnown RBP18.9■□□□□ 0.62
HDAC1-208ENST00000482310 STK26Q9P289 416 aa18.9■□□□□ 0.62
HDAC1-208ENST00000482310 KNDC1Q76NI1 1749 aa18.9■□□□□ 0.62
HDAC1-208ENST00000482310 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
HDAC1-208ENST00000482310 NWD1Q149M9 1564 aa18.89■□□□□ 0.62
HDAC1-208ENST00000482310 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
HDAC1-208ENST00000482310 TIMELESSQ9UNS1 1208 aa18.89■□□□□ 0.61
HDAC1-208ENST00000482310 TBX22Q9Y458 520 aa18.89■□□□□ 0.61
HDAC1-208ENST00000482310 ROCK2O75116 1388 aaKnown RBP18.89■□□□□ 0.61
HDAC1-208ENST00000482310 ADGRB1O14514 1584 aa18.89■□□□□ 0.61
HDAC1-208ENST00000482310 ARHGEF28Q8N1W1 1705 aaKnown RBP18.88■□□□□ 0.61
HDAC1-208ENST00000482310 RALGAPBQ86X10 1494 aa18.88■□□□□ 0.61
HDAC1-208ENST00000482310 XIRP1Q702N8 1843 aaKnown RBP18.87■□□□□ 0.61
HDAC1-208ENST00000482310 YTHDC2Q9H6S0 1430 aaKnown RBP18.85■□□□□ 0.61
HDAC1-208ENST00000482310 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
HDAC1-208ENST00000482310 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.6
HDAC1-208ENST00000482310 TRAK1Q9UPV9 953 aa18.83■□□□□ 0.6
HDAC1-208ENST00000482310 KCNA6P17658 529 aa18.82■□□□□ 0.6
HDAC1-208ENST00000482310 CPS1P31327 1500 aa18.82■□□□□ 0.6
HDAC1-208ENST00000482310 QRICH2Q9H0J4 1663 aa18.82■□□□□ 0.6
HDAC1-208ENST00000482310 PIK3R4Q99570 1358 aa18.81■□□□□ 0.6
HDAC1-208ENST00000482310 LRPPRCP42704 1394 aaKnown RBP18.81■□□□□ 0.6
HDAC1-208ENST00000482310 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
HDAC1-208ENST00000482310 HSPA1LP34931 641 aa18.8■□□□□ 0.6
HDAC1-208ENST00000482310 CARD11Q9BXL7 1154 aa18.8■□□□□ 0.6
HDAC1-208ENST00000482310 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
HDAC1-208ENST00000482310 SAFB2Q14151 953 aaKnown RBP eCLIP18.79■□□□□ 0.6
HDAC1-208ENST00000482310 ROBO2Q9HCK4 1378 aa18.79■□□□□ 0.6
HDAC1-208ENST00000482310 PROSER2Q86WR7 435 aaPredicted RBP18.77■□□□□ 0.6
HDAC1-208ENST00000482310 PLEKHH1Q9ULM0 1364 aa18.77■□□□□ 0.6
HDAC1-208ENST00000482310 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.59
HDAC1-208ENST00000482310 LRRC7Q96NW7 1537 aa18.76■□□□□ 0.59
HDAC1-208ENST00000482310 DLC1Q96QB1 1528 aa18.76■□□□□ 0.59
HDAC1-208ENST00000482310 PIP4K2BP78356 416 aa18.76■□□□□ 0.59
HDAC1-208ENST00000482310 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
HDAC1-208ENST00000482310 ZEB1P37275 1124 aaPredicted RBP18.75■□□□□ 0.59
HDAC1-208ENST00000482310 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
HDAC1-208ENST00000482310 C14orf37Q86TY3 774 aa18.75■□□□□ 0.59
HDAC1-208ENST00000482310 GPRASP1Q5JY77 1395 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms