RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.48
LINC00888-203ENST00000482098 PCMTD1Q96MG8 357 aaPredicted RBP12.07□□□□□ -0.48
LINC00888-203ENST00000482098 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
LINC00888-203ENST00000482098 GNPATO15228 680 aa12.06□□□□□ -0.48
LINC00888-203ENST00000482098 DSG2Q14126 1118 aa12.06□□□□□ -0.48
LINC00888-203ENST00000482098 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
LINC00888-203ENST00000482098 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
LINC00888-203ENST00000482098 TRAK2O60296 914 aa12.05□□□□□ -0.48
LINC00888-203ENST00000482098 SPATA31D1Q6ZQQ2 1576 aa12.05□□□□□ -0.48
LINC00888-203ENST00000482098 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
LINC00888-203ENST00000482098 HIC1Q14526 733 aa12.04□□□□□ -0.48
LINC00888-203ENST00000482098 CCDC82Q8N4S0 544 aa12.04□□□□□ -0.48
LINC00888-203ENST00000482098 TMC2Q8TDI7 906 aa12.04□□□□□ -0.48
LINC00888-203ENST00000482098 ZMYM4Q5VZL5 1548 aa12.03□□□□□ -0.48
LINC00888-203ENST00000482098 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
LINC00888-203ENST00000482098 CTTNBP2Q8WZ74 1663 aa12.03□□□□□ -0.48
LINC00888-203ENST00000482098 IQSEC2Q5JU85 1478 aa12.02□□□□□ -0.48
LINC00888-203ENST00000482098 TTC37Q6PGP7 1564 aa12.02□□□□□ -0.49
LINC00888-203ENST00000482098 FCHSD2O94868 740 aa12.02□□□□□ -0.49
LINC00888-203ENST00000482098 FOXK1P85037 733 aa12.02□□□□□ -0.49
LINC00888-203ENST00000482098 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
LINC00888-203ENST00000482098 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
LINC00888-203ENST00000482098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC00888-203ENST00000482098 PTPRTO14522 1441 aa12.01□□□□□ -0.49
LINC00888-203ENST00000482098 PRXQ9BXM0 1461 aa12.01□□□□□ -0.49
LINC00888-203ENST00000482098 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00888-203ENST00000482098 MAP3K9P80192 1104 aa12□□□□□ -0.49
LINC00888-203ENST00000482098 RICTORQ6R327 1708 aa12□□□□□ -0.49
LINC00888-203ENST00000482098 PLEKHD1A6NEE1 506 aa11.99□□□□□ -0.49
LINC00888-203ENST00000482098 ZFYVE16Q7Z3T8 1539 aa11.99□□□□□ -0.49
LINC00888-203ENST00000482098 CFAP74Q9C0B2 1584 aa11.97□□□□□ -0.49
LINC00888-203ENST00000482098 ARHGEF12Q9NZN5 1544 aa11.97□□□□□ -0.49
LINC00888-203ENST00000482098 UHRF1BP1Q6BDS2 1440 aa11.97□□□□□ -0.49
LINC00888-203ENST00000482098 PHF12Q96QT6 1004 aa11.97□□□□□ -0.49
LINC00888-203ENST00000482098 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.5
LINC00888-203ENST00000482098 ATP10AO60312 1499 aa11.95□□□□□ -0.5
LINC00888-203ENST00000482098 MLECQ14165 292 aa11.95□□□□□ -0.5
LINC00888-203ENST00000482098 GIGYF2Q6Y7W6 1299 aaKnown RBP11.95□□□□□ -0.5
LINC00888-203ENST00000482098 PLPP6Q8IY26 295 aa11.95□□□□□ -0.5
LINC00888-203ENST00000482098 SETD1BQ9UPS6 1966 aaKnown RBP11.95□□□□□ -0.5
LINC00888-203ENST00000482098 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
LINC00888-203ENST00000482098 RAPGEF6Q8TEU7 1601 aa11.94□□□□□ -0.5
LINC00888-203ENST00000482098 OSBPP22059 807 aa11.94□□□□□ -0.5
LINC00888-203ENST00000482098 C9orf84Q5VXU9 1444 aa11.94□□□□□ -0.5
LINC00888-203ENST00000482098 STRCQ7RTU9 1775 aa11.93□□□□□ -0.5
LINC00888-203ENST00000482098 MCM6Q14566 821 aa11.93□□□□□ -0.5
LINC00888-203ENST00000482098 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
LINC00888-203ENST00000482098 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
LINC00888-203ENST00000482098 FECHP22830 423 aa11.92□□□□□ -0.5
LINC00888-203ENST00000482098 LTBP4Q8N2S1 1624 aa11.92□□□□□ -0.5
LINC00888-203ENST00000482098 HECW1Q76N89 1606 aa11.91□□□□□ -0.5
LINC00888-203ENST00000482098 RAD21O60216 631 aa11.91□□□□□ -0.5
LINC00888-203ENST00000482098 CEBPAP49715 358 aaPredicted RBP11.91□□□□□ -0.5
LINC00888-203ENST00000482098 SH3D19Q5HYK7 790 aa11.91□□□□□ -0.5
LINC00888-203ENST00000482098 PROSER2Q86WR7 435 aaPredicted RBP11.91□□□□□ -0.5
LINC00888-203ENST00000482098 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
LINC00888-203ENST00000482098 CCDC97Q96F63 343 aaPredicted RBP11.91□□□□□ -0.5
LINC00888-203ENST00000482098 SCAPERQ9BY12 1400 aa11.91□□□□□ -0.5
LINC00888-203ENST00000482098 SAMD9Q5K651 1589 aa11.91□□□□□ -0.5
LINC00888-203ENST00000482098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00888-203ENST00000482098 PLCH2O75038 1416 aa11.9□□□□□ -0.5
LINC00888-203ENST00000482098 MS4A1P11836 297 aa11.9□□□□□ -0.5
LINC00888-203ENST00000482098 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
LINC00888-203ENST00000482098 SIGLEC1Q9BZZ2 1709 aa11.9□□□□□ -0.5
LINC00888-203ENST00000482098 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
LINC00888-203ENST00000482098 TIE1P35590 1138 aa11.88□□□□□ -0.51
LINC00888-203ENST00000482098 PTGER2P43116 358 aa11.88□□□□□ -0.51
LINC00888-203ENST00000482098 KCTD17Q8N5Z5 321 aa11.88□□□□□ -0.51
LINC00888-203ENST00000482098 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
LINC00888-203ENST00000482098 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
LINC00888-203ENST00000482098 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
LINC00888-203ENST00000482098 EFCAB2Q5VUJ9 269 aa11.87□□□□□ -0.51
LINC00888-203ENST00000482098 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
LINC00888-203ENST00000482098 TRAIPQ9BWF2 469 aa11.87□□□□□ -0.51
LINC00888-203ENST00000482098 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
LINC00888-203ENST00000482098 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
LINC00888-203ENST00000482098 DDX12PQ92771 950 aa11.86□□□□□ -0.51
LINC00888-203ENST00000482098 CLCN1P35523 988 aa11.85□□□□□ -0.51
LINC00888-203ENST00000482098 PTGDRQ13258 359 aa11.85□□□□□ -0.51
LINC00888-203ENST00000482098 ZNF518AQ6AHZ1 1483 aa11.84□□□□□ -0.51
LINC00888-203ENST00000482098 TBC1D12O60347 775 aa11.84□□□□□ -0.51
LINC00888-203ENST00000482098 SKIV2LQ15477 1246 aaKnown RBP11.84□□□□□ -0.51
LINC00888-203ENST00000482098 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
LINC00888-203ENST00000482098 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
LINC00888-203ENST00000482098 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
LINC00888-203ENST00000482098 UBAP1LF5GYI3 381 aa11.83□□□□□ -0.52
LINC00888-203ENST00000482098 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.522e-7■■■■□ 22.2
LINC00888-203ENST00000482098 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
LINC00888-203ENST00000482098 ESF1Q9H501 851 aaKnown RBP11.82□□□□□ -0.52
LINC00888-203ENST00000482098 CNTLNQ9NXG0 1405 aa11.82□□□□□ -0.52
LINC00888-203ENST00000482098 AGLP35573 1532 aa11.81□□□□□ -0.52
LINC00888-203ENST00000482098 NPATQ14207 1427 aa11.81□□□□□ -0.52
LINC00888-203ENST00000482098 G3V3G9 751 aa11.81□□□□□ -0.52
LINC00888-203ENST00000482098 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
LINC00888-203ENST00000482098 GPCPD1Q9NPB8 672 aa11.8□□□□□ -0.52
LINC00888-203ENST00000482098 KDM5CP41229 1560 aa11.79□□□□□ -0.52
LINC00888-203ENST00000482098 MLH3Q9UHC1 1453 aa11.79□□□□□ -0.52
LINC00888-203ENST00000482098 FNBP4Q8N3X1 1017 aaPredicted RBP11.79□□□□□ -0.52
LINC00888-203ENST00000482098 KIF3CO14782 793 aa11.78□□□□□ -0.52
LINC00888-203ENST00000482098 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms