RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
ABCA2-217ENST00000479446 FOXD4L6Q3SYB3 417 aaPredicted RBP24.05■■□□□ 1.44
ABCA2-217ENST00000479446 C1orf141Q5JVX7 400 aa24.05■■□□□ 1.44
ABCA2-217ENST00000479446 FOXD4L3Q6VB84 417 aaPredicted RBP24.05■■□□□ 1.44
ABCA2-217ENST00000479446 BECN2A8MW95 431 aa24.05■■□□□ 1.44
ABCA2-217ENST00000479446 CREBRFQ8IUR6 639 aa24.05■■□□□ 1.44
ABCA2-217ENST00000479446 CUX1P39880 1505 aa24.04■■□□□ 1.44
ABCA2-217ENST00000479446 ROCK1Q13464 1354 aa24.04■■□□□ 1.44
ABCA2-217ENST00000479446 ZKSCAN1P17029 563 aaPredicted RBP24.04■■□□□ 1.44
ABCA2-217ENST00000479446 TNNT3P45378 269 aaPredicted RBP24.04■■□□□ 1.44
ABCA2-217ENST00000479446 MIA2Q96PC5 1412 aa24.03■■□□□ 1.44
ABCA2-217ENST00000479446 NEXNQ0ZGT2 675 aa24.02■■□□□ 1.44
ABCA2-217ENST00000479446 FRAT2O75474 233 aaPredicted RBP24.01■■□□□ 1.43
ABCA2-217ENST00000479446 BRD4O60885 1362 aaPredicted RBP24.01■■□□□ 1.43
ABCA2-217ENST00000479446 KIF21BO75037 1637 aa24■■□□□ 1.43
ABCA2-217ENST00000479446 C9orf78Q9NZ63 289 aaPredicted RBP24■■□□□ 1.43
ABCA2-217ENST00000479446 LRRFIP1Q32MZ4 808 aaKnown RBP24■■□□□ 1.43
ABCA2-217ENST00000479446 LRRC9Q6ZRR7 1453 aa24■■□□□ 1.43
ABCA2-217ENST00000479446 CCDC9Q9Y3X0 531 aaKnown RBP23.99■■□□□ 1.43
ABCA2-217ENST00000479446 WASHC2AQ641Q2 1341 aa23.98■■□□□ 1.43
ABCA2-217ENST00000479446 ZNF644Q9H582 1327 aaPredicted RBP23.98■■□□□ 1.43
ABCA2-217ENST00000479446 GTF2E1P29083 439 aaPredicted RBP23.98■■□□□ 1.43
ABCA2-217ENST00000479446 GNAI1P63096 354 aa23.98■■□□□ 1.43
ABCA2-217ENST00000479446 FGD5Q6ZNL6 1462 aa23.98■■□□□ 1.43
ABCA2-217ENST00000479446 CPLX2Q6PUV4 134 aaKnown RBP23.97■■□□□ 1.43
ABCA2-217ENST00000479446 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
ABCA2-217ENST00000479446 NUCB2P80303 420 aa23.97■■□□□ 1.43
ABCA2-217ENST00000479446 INTS3Q68E01 1043 aaKnown RBP23.97■■□□□ 1.43
ABCA2-217ENST00000479446 C22orf23Q9BZE7 217 aa23.97■■□□□ 1.43
ABCA2-217ENST00000479446 GAPVD1Q14C86 1478 aa23.97■■□□□ 1.43
ABCA2-217ENST00000479446 ANO2Q9NQ90 1003 aa23.96■■□□□ 1.43
ABCA2-217ENST00000479446 IFIT2P09913 472 aaKnown RBP23.96■■□□□ 1.43
ABCA2-217ENST00000479446 MCTP1Q6DN14 999 aa23.96■■□□□ 1.43
ABCA2-217ENST00000479446 LNPKQ9C0E8 428 aa23.95■■□□□ 1.42
ABCA2-217ENST00000479446 TPD52L1Q16890 204 aaPredicted RBP23.95■■□□□ 1.42
ABCA2-217ENST00000479446 AKAP17AQ02040 695 aaKnown RBP23.94■■□□□ 1.42
ABCA2-217ENST00000479446 FKBP5Q13451 457 aaPredicted RBP23.94■■□□□ 1.42
ABCA2-217ENST00000479446 ANKRD50Q9ULJ7 1429 aa23.94■■□□□ 1.42
ABCA2-217ENST00000479446 SYNE3Q6ZMZ3 975 aa23.93■■□□□ 1.42
ABCA2-217ENST00000479446 MARCH6O60337 910 aa23.93■■□□□ 1.42
ABCA2-217ENST00000479446 TSR1Q2NL82 804 aaKnown RBP23.93■■□□□ 1.42
ABCA2-217ENST00000479446 PANK1Q8TE04 598 aa23.93■■□□□ 1.42
ABCA2-217ENST00000479446 RNF20Q5VTR2 975 aa23.93■■□□□ 1.42
ABCA2-217ENST00000479446 PES1O00541 588 aaKnown RBP23.92■■□□□ 1.42
ABCA2-217ENST00000479446 TTC5Q8N0Z6 440 aa23.92■■□□□ 1.42
ABCA2-217ENST00000479446 A0A0U1RQG5 324 aaPredicted RBP23.92■■□□□ 1.42
ABCA2-217ENST00000479446 NFKBIBQ15653 356 aa23.91■■□□□ 1.42
ABCA2-217ENST00000479446 ADAMTS8Q9UP79 889 aa23.91■■□□□ 1.42
ABCA2-217ENST00000479446 TPM1P09493 284 aa23.91■■□□□ 1.42
ABCA2-217ENST00000479446 DDX58O95786 925 aaKnown RBP23.9■■□□□ 1.42
ABCA2-217ENST00000479446 FYCO1Q9BQS8 1478 aa23.89■■□□□ 1.42
ABCA2-217ENST00000479446 G3V3G9 751 aa23.89■■□□□ 1.42
ABCA2-217ENST00000479446 DCAF8Q5TAQ9 597 aa23.89■■□□□ 1.42
ABCA2-217ENST00000479446 HSP90AB4PQ58FF6 505 aa23.89■■□□□ 1.42
ABCA2-217ENST00000479446 NECTIN2Q92692 538 aa23.89■■□□□ 1.41
ABCA2-217ENST00000479446 CASKIN1Q8WXD9 1431 aa23.89■■□□□ 1.41
ABCA2-217ENST00000479446 NCBP3Q53F19 620 aaKnown RBP23.88■■□□□ 1.41
ABCA2-217ENST00000479446 G3BP1Q13283 466 aaKnown RBP eCLIP23.88■■□□□ 1.41
ABCA2-217ENST00000479446 NCOA2Q15596 1464 aa23.88■■□□□ 1.41
ABCA2-217ENST00000479446 SMC3Q9UQE7 1217 aa23.87■■□□□ 1.41
ABCA2-217ENST00000479446 BICD2Q8TD16 824 aa23.87■■□□□ 1.41
ABCA2-217ENST00000479446 CPLX1O14810 134 aa23.87■■□□□ 1.41
ABCA2-217ENST00000479446 TRIM29Q14134 588 aa23.87■■□□□ 1.41
ABCA2-217ENST00000479446 CEP89Q96ST8 783 aa23.86■■□□□ 1.41
ABCA2-217ENST00000479446 CDC45O75419 566 aa23.86■■□□□ 1.41
ABCA2-217ENST00000479446 CCAR2Q8N163 923 aaKnown RBP23.86■■□□□ 1.41
ABCA2-217ENST00000479446 TSPYL4Q9UJ04 414 aa23.86■■□□□ 1.41
ABCA2-217ENST00000479446 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
ABCA2-217ENST00000479446 GGNBP2Q9H3C7 697 aa23.85■■□□□ 1.41
ABCA2-217ENST00000479446 VPS37CA5D8V6 355 aaPredicted RBP23.84■■□□□ 1.41
ABCA2-217ENST00000479446 HMOX1P09601 288 aa23.84■■□□□ 1.41
ABCA2-217ENST00000479446 ERC2O15083 957 aa23.84■■□□□ 1.41
ABCA2-217ENST00000479446 TPM2P07951 284 aa23.83■■□□□ 1.41
ABCA2-217ENST00000479446 CDCA7LQ96GN5 454 aa23.83■■□□□ 1.41
ABCA2-217ENST00000479446 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.83■■□□□ 1.41
ABCA2-217ENST00000479446 ZNF592Q92610 1267 aa23.83■■□□□ 1.41
ABCA2-217ENST00000479446 RRBP1Q9P2E9 1410 aaKnown RBP23.83■■□□□ 1.4
ABCA2-217ENST00000479446 FAM43AQ8N2R8 423 aa23.82■■□□□ 1.4
ABCA2-217ENST00000479446 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.82■■□□□ 1.4
ABCA2-217ENST00000479446 TCP11L2Q8N4U5 519 aa23.82■■□□□ 1.4
ABCA2-217ENST00000479446 GPS2Q13227 327 aa23.82■■□□□ 1.4
ABCA2-217ENST00000479446 MTHFSP49914 203 aa23.81■■□□□ 1.4
ABCA2-217ENST00000479446 TRDNQ13061 729 aa23.81■■□□□ 1.4
ABCA2-217ENST00000479446 VPS53Q5VIR6 699 aa23.81■■□□□ 1.4
ABCA2-217ENST00000479446 MRE11P49959 708 aa23.8■■□□□ 1.4
ABCA2-217ENST00000479446 PPP2R1AP30153 589 aa23.8■■□□□ 1.4
ABCA2-217ENST00000479446 APPP05067 770 aa23.79■■□□□ 1.4
ABCA2-217ENST00000479446 VSIG10Q8N0Z9 540 aa23.78■■□□□ 1.4
ABCA2-217ENST00000479446 PDE4CQ08493 712 aa23.78■■□□□ 1.4
ABCA2-217ENST00000479446 CCDC70Q6NSX1 233 aa23.78■■□□□ 1.4
ABCA2-217ENST00000479446 SASS6Q6UVJ0 657 aa23.78■■□□□ 1.4
ABCA2-217ENST00000479446 HOOK1Q9UJC3 728 aaKnown RBP23.78■■□□□ 1.4
ABCA2-217ENST00000479446 ANKRD20A12PQ8NF67 263 aa23.77■■□□□ 1.4
ABCA2-217ENST00000479446 CABP2Q9NPB3 220 aa23.77■■□□□ 1.4
ABCA2-217ENST00000479446 IPO7O95373 1038 aaKnown RBP23.77■■□□□ 1.4
ABCA2-217ENST00000479446 EVA1CP58658 441 aa23.76■■□□□ 1.39
ABCA2-217ENST00000479446 PDE3AQ14432 1141 aa23.76■■□□□ 1.39
ABCA2-217ENST00000479446 FAM13BQ9NYF5 915 aa23.76■■□□□ 1.39
ABCA2-217ENST00000479446 PSME1Q06323 249 aa23.75■■□□□ 1.39
ABCA2-217ENST00000479446 CCDC73Q6ZRK6 1079 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms