RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 IPO4Q8TEX9 1081 aaKnown RBP10.76□□□□□ -0.69
NELFCD-206ENST00000478389 HECW1Q76N89 1606 aa10.76□□□□□ -0.69
NELFCD-206ENST00000478389 SPATA31E1Q6ZUB1 1445 aa10.76□□□□□ -0.69
NELFCD-206ENST00000478389 ISY1Q9ULR0 285 aaKnown RBP10.75□□□□□ -0.69
NELFCD-206ENST00000478389 FOXD4L6Q3SYB3 417 aaPredicted RBP10.75□□□□□ -0.69
NELFCD-206ENST00000478389 C8orf34Q49A92 452 aa10.75□□□□□ -0.69
NELFCD-206ENST00000478389 FOXD4L3Q6VB84 417 aaPredicted RBP10.75□□□□□ -0.69
NELFCD-206ENST00000478389 MRE11P49959 708 aa10.75□□□□□ -0.69
NELFCD-206ENST00000478389 CRBNQ96SW2 442 aa10.75□□□□□ -0.69
NELFCD-206ENST00000478389 XRCC6P12956 609 aaKnown RBP eCLIP10.74□□□□□ -0.69
NELFCD-206ENST00000478389 RALBP1Q15311 655 aa10.74□□□□□ -0.69
NELFCD-206ENST00000478389 MAP7D2Q96T17 732 aa10.74□□□□□ -0.69
NELFCD-206ENST00000478389 KIF15Q9NS87 1388 aa10.74□□□□□ -0.69
NELFCD-206ENST00000478389 CASKIN1Q8WXD9 1431 aa10.74□□□□□ -0.69
NELFCD-206ENST00000478389 MFAP1P55081 439 aaKnown RBP10.74□□□□□ -0.69
NELFCD-206ENST00000478389 TRIM44Q96DX7 344 aaPredicted RBP10.74□□□□□ -0.69
NELFCD-206ENST00000478389 MPHOSPH9Q99550 1183 aa10.74□□□□□ -0.69
NELFCD-206ENST00000478389 MYBBP1AQ9BQG0 1328 aaKnown RBP10.73□□□□□ -0.69
NELFCD-206ENST00000478389 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
NELFCD-206ENST00000478389 ESPNB1AK53 854 aa10.73□□□□□ -0.69
NELFCD-206ENST00000478389 SAMD9Q5K651 1589 aa10.73□□□□□ -0.69
NELFCD-206ENST00000478389 MYH16Q9H6N6 1097 aa10.73□□□□□ -0.69
NELFCD-206ENST00000478389 KDM2BQ8NHM5 1336 aa10.73□□□□□ -0.69
NELFCD-206ENST00000478389 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
NELFCD-206ENST00000478389 PTPRKQ15262 1439 aa10.73□□□□□ -0.69
NELFCD-206ENST00000478389 FSD2A1L4K1 749 aa10.72□□□□□ -0.69
NELFCD-206ENST00000478389 PLEKHD1A6NEE1 506 aa10.72□□□□□ -0.69
NELFCD-206ENST00000478389 GPATCH11Q8N954 259 aa10.72□□□□□ -0.69
NELFCD-206ENST00000478389 KAT6BQ8WYB5 2073 aa10.72□□□□□ -0.69
NELFCD-206ENST00000478389 FAM69CQ0P6D2 419 aa10.71□□□□□ -0.69
NELFCD-206ENST00000478389 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.69
NELFCD-206ENST00000478389 FAM193AP78312 1265 aa10.71□□□□□ -0.7
NELFCD-206ENST00000478389 TMCO4Q5TGY1 634 aa10.71□□□□□ -0.7
NELFCD-206ENST00000478389 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.7
NELFCD-206ENST00000478389 CLASP1Q7Z460 1538 aa10.7□□□□□ -0.7
NELFCD-206ENST00000478389 SOX12O15370 315 aa10.7□□□□□ -0.7
NELFCD-206ENST00000478389 GZF1Q9H116 711 aaPredicted RBP10.7□□□□□ -0.7
NELFCD-206ENST00000478389 MYOM3Q5VTT5 1437 aa10.7□□□□□ -0.7
NELFCD-206ENST00000478389 RIMBP3CA6NJZ7 1639 aa10.7□□□□□ -0.7
NELFCD-206ENST00000478389 RIMBP3BA6NNM3 1639 aa10.7□□□□□ -0.7
NELFCD-206ENST00000478389 RIMBP3Q9UFD9 1639 aa10.7□□□□□ -0.7
NELFCD-206ENST00000478389 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
NELFCD-206ENST00000478389 SPRYD3Q8NCJ5 442 aa10.7□□□□□ -0.7
NELFCD-206ENST00000478389 RPRD2Q5VT52 1461 aaKnown RBP10.69□□□□□ -0.7
NELFCD-206ENST00000478389 NBPF8Q3BBV2 869 aa10.69□□□□□ -0.7
NELFCD-206ENST00000478389 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
NELFCD-206ENST00000478389 UPF2Q9HAU5 1272 aaKnown RBP10.69□□□□□ -0.7
NELFCD-206ENST00000478389 PLB1Q6P1J6 1458 aa10.68□□□□□ -0.7
NELFCD-206ENST00000478389 SLKQ9H2G2 1235 aaPredicted RBP10.68□□□□□ -0.7
NELFCD-206ENST00000478389 PLEKHH2Q8IVE3 1493 aa10.68□□□□□ -0.7
NELFCD-206ENST00000478389 INSRP06213 1382 aa10.68□□□□□ -0.7
NELFCD-206ENST00000478389 GCC2Q8IWJ2 1684 aa10.67□□□□□ -0.7
NELFCD-206ENST00000478389 PLIN1O60240 522 aa10.67□□□□□ -0.7
NELFCD-206ENST00000478389 NLRP13Q86W25 1043 aa10.67□□□□□ -0.7
NELFCD-206ENST00000478389 SKAP1Q86WV1 359 aa10.67□□□□□ -0.7
NELFCD-206ENST00000478389 CCDC82Q8N4S0 544 aa10.67□□□□□ -0.7
NELFCD-206ENST00000478389 RGS3P49796 1198 aa10.67□□□□□ -0.7
NELFCD-206ENST00000478389 USP47Q96K76 1375 aa10.67□□□□□ -0.7
NELFCD-206ENST00000478389 MTERF4Q7Z6M4 381 aaKnown RBP10.67□□□□□ -0.7
NELFCD-206ENST00000478389 TEX14Q8IWB6 1497 aa10.67□□□□□ -0.7
NELFCD-206ENST00000478389 SMARCA5O60264 1052 aaPredicted RBP10.66□□□□□ -0.7
NELFCD-206ENST00000478389 TERF1P54274 439 aa10.66□□□□□ -0.7
NELFCD-206ENST00000478389 PRDM4Q9UKN5 801 aa10.66□□□□□ -0.7
NELFCD-206ENST00000478389 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
NELFCD-206ENST00000478389 PANK2Q9BZ23 570 aa10.66□□□□□ -0.7
NELFCD-206ENST00000478389 ZNF777Q9ULD5 760 aaPredicted RBP10.66□□□□□ -0.7
NELFCD-206ENST00000478389 GRPEL1Q9HAV7 217 aa10.65□□□□□ -0.7
NELFCD-206ENST00000478389 BRD1O95696 1058 aa10.65□□□□□ -0.7
NELFCD-206ENST00000478389 MCM4P33991 863 aa10.65□□□□□ -0.7
NELFCD-206ENST00000478389 E9PSI1 815 aa10.65□□□□□ -0.71
NELFCD-206ENST00000478389 FOXD4L1Q9NU39 408 aa10.65□□□□□ -0.71
NELFCD-206ENST00000478389 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.64□□□□□ -0.71
NELFCD-206ENST00000478389 KIAA1211Q6ZU35 1233 aa10.64□□□□□ -0.71
NELFCD-206ENST00000478389 MAPK8IP3Q9UPT6 1336 aa10.64□□□□□ -0.71
NELFCD-206ENST00000478389 DENND4BO75064 1496 aaPredicted RBP10.64□□□□□ -0.71
NELFCD-206ENST00000478389 ZMYM4Q5VZL5 1548 aa10.64□□□□□ -0.71
NELFCD-206ENST00000478389 UGGT2Q9NYU1 1516 aa10.64□□□□□ -0.71
NELFCD-206ENST00000478389 ANKRD30BQ9BXX2 1392 aa10.64□□□□□ -0.71
NELFCD-206ENST00000478389 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
NELFCD-206ENST00000478389 CANXP27824 592 aaKnown RBP10.64□□□□□ -0.71
NELFCD-206ENST00000478389 SMAP1Q8IYB5 467 aaPredicted RBP10.64□□□□□ -0.71
NELFCD-206ENST00000478389 CHRM1P11229 460 aaPredicted RBP10.63□□□□□ -0.71
NELFCD-206ENST00000478389 TRAK2O60296 914 aa10.63□□□□□ -0.71
NELFCD-206ENST00000478389 ANP32BQ92688 251 aaKnown RBP10.63□□□□□ -0.71
NELFCD-206ENST00000478389 ANTXR1Q9H6X2 564 aa10.63□□□□□ -0.71
NELFCD-206ENST00000478389 CARD11Q9BXL7 1154 aa10.62□□□□□ -0.71
NELFCD-206ENST00000478389 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
NELFCD-206ENST00000478389 PTMAP06454 111 aaKnown RBP10.62□□□□□ -0.71
NELFCD-206ENST00000478389 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
NELFCD-206ENST00000478389 MAGI3Q5TCQ9 1506 aa10.62□□□□□ -0.71
NELFCD-206ENST00000478389 CDCA8Q53HL2 280 aa10.62□□□□□ -0.71
NELFCD-206ENST00000478389 SUPT6HQ7KZ85 1726 aaKnown RBP10.62□□□□□ -0.71
NELFCD-206ENST00000478389 CHMP5Q9NZZ3 219 aa10.61□□□□□ -0.71
NELFCD-206ENST00000478389 KIAA0556O60303 1618 aa10.61□□□□□ -0.71
NELFCD-206ENST00000478389 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
NELFCD-206ENST00000478389 GTF2E1P29083 439 aaPredicted RBP10.6□□□□□ -0.71
NELFCD-206ENST00000478389 MSNP26038 577 aaKnown RBP10.6□□□□□ -0.71
NELFCD-206ENST00000478389 TNNT2P45379 298 aaPredicted RBP10.6□□□□□ -0.71
NELFCD-206ENST00000478389 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
NELFCD-206ENST00000478389 USP19O94966 1318 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms