RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 NISCHQ9Y2I1 1504 aa15.59■□□□□ 0.09
NELFCD-206ENST00000478389 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
NELFCD-206ENST00000478389 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
NELFCD-206ENST00000478389 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
NELFCD-206ENST00000478389 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
NELFCD-206ENST00000478389 PLPPR3Q6T4P5 718 aa14.24□□□□□ -0.13
NELFCD-206ENST00000478389 DAXXQ9UER7 740 aaPredicted RBP14.16□□□□□ -0.14
NELFCD-206ENST00000478389 MYT1Q01538 1121 aa14.11□□□□□ -0.15
NELFCD-206ENST00000478389 HRCP23327 699 aa14.09□□□□□ -0.15
NELFCD-206ENST00000478389 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
NELFCD-206ENST00000478389 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
NELFCD-206ENST00000478389 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
NELFCD-206ENST00000478389 APLP2Q06481 763 aa13.84□□□□□ -0.19
NELFCD-206ENST00000478389 DCAF8L2P0C7V8 631 aa13.75□□□□□ -0.21
NELFCD-206ENST00000478389 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
NELFCD-206ENST00000478389 ABCC9O60706 1549 aa13.64□□□□□ -0.23
NELFCD-206ENST00000478389 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
NELFCD-206ENST00000478389 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.23
NELFCD-206ENST00000478389 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
NELFCD-206ENST00000478389 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
NELFCD-206ENST00000478389 CCDC180Q9P1Z9 1646 aa13.55□□□□□ -0.24
NELFCD-206ENST00000478389 TIMELESSQ9UNS1 1208 aa13.43□□□□□ -0.26
NELFCD-206ENST00000478389 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
NELFCD-206ENST00000478389 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
NELFCD-206ENST00000478389 ZEB1P37275 1124 aaPredicted RBP13.35□□□□□ -0.27
NELFCD-206ENST00000478389 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
NELFCD-206ENST00000478389 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.28
NELFCD-206ENST00000478389 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
NELFCD-206ENST00000478389 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
NELFCD-206ENST00000478389 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
NELFCD-206ENST00000478389 CHIC1Q5VXU3 224 aa13.25□□□□□ -0.29
NELFCD-206ENST00000478389 KCNA4P22459 653 aa13.22□□□□□ -0.29
NELFCD-206ENST00000478389 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
NELFCD-206ENST00000478389 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
NELFCD-206ENST00000478389 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
NELFCD-206ENST00000478389 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
NELFCD-206ENST00000478389 ARXQ96QS3 562 aa13.1□□□□□ -0.31
NELFCD-206ENST00000478389 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
NELFCD-206ENST00000478389 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
NELFCD-206ENST00000478389 PODXL2Q9NZ53 605 aa13.02□□□□□ -0.32
NELFCD-206ENST00000478389 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
NELFCD-206ENST00000478389 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.348e-7■■□□□ 12.1
NELFCD-206ENST00000478389 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
NELFCD-206ENST00000478389 GTF3C3Q9Y5Q9 886 aa12.94□□□□□ -0.34
NELFCD-206ENST00000478389 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
NELFCD-206ENST00000478389 AEBP2Q6ZN18 517 aaPredicted RBP12.92□□□□□ -0.34
NELFCD-206ENST00000478389 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
NELFCD-206ENST00000478389 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
NELFCD-206ENST00000478389 TPRNQ4KMQ1 711 aa12.87□□□□□ -0.35
NELFCD-206ENST00000478389 NACADO15069 1562 aa12.87□□□□□ -0.35
NELFCD-206ENST00000478389 LOC105371045A0A1W2PR82 267 aa12.87□□□□□ -0.35
NELFCD-206ENST00000478389 HOMEZQ8IX15 550 aa12.82□□□□□ -0.36
NELFCD-206ENST00000478389 FAM9AQ8IZU1 332 aaPredicted RBP12.74□□□□□ -0.37
NELFCD-206ENST00000478389 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
NELFCD-206ENST00000478389 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.37
NELFCD-206ENST00000478389 C14orf37Q86TY3 774 aa12.63□□□□□ -0.39
NELFCD-206ENST00000478389 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
NELFCD-206ENST00000478389 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
NELFCD-206ENST00000478389 HAP1P54257 671 aaPredicted RBP12.53□□□□□ -0.4
NELFCD-206ENST00000478389 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
NELFCD-206ENST00000478389 ANP32EQ9BTT0 268 aa12.53□□□□□ -0.4
NELFCD-206ENST00000478389 BCANQ96GW7 911 aa12.51□□□□□ -0.41
NELFCD-206ENST00000478389 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
NELFCD-206ENST00000478389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
NELFCD-206ENST00000478389 YTHDC1Q96MU7 727 aaKnown RBP12.44□□□□□ -0.42
NELFCD-206ENST00000478389 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
NELFCD-206ENST00000478389 UNC13AQ9UPW8 1703 aa12.39□□□□□ -0.43
NELFCD-206ENST00000478389 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
NELFCD-206ENST00000478389 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
NELFCD-206ENST00000478389 BICRAQ9NZM4 1560 aa12.39□□□□□ -0.43
NELFCD-206ENST00000478389 DHX37Q8IY37 1157 aaKnown RBP12.32□□□□□ -0.44
NELFCD-206ENST00000478389 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
NELFCD-206ENST00000478389 MIER1Q8N108 512 aa12.27□□□□□ -0.44
NELFCD-206ENST00000478389 PLCB2Q00722 1185 aa12.27□□□□□ -0.45
NELFCD-206ENST00000478389 TSHZ2Q9NRE2 1034 aa12.27□□□□□ -0.45
NELFCD-206ENST00000478389 SUPT16HQ9Y5B9 1047 aaKnown RBP12.27□□□□□ -0.45
NELFCD-206ENST00000478389 CECR2Q9BXF3 1484 aa12.26□□□□□ -0.45
NELFCD-206ENST00000478389 CHMP4AQ9BY43 222 aa12.26□□□□□ -0.45
NELFCD-206ENST00000478389 PDE4CQ08493 712 aa12.23□□□□□ -0.45
NELFCD-206ENST00000478389 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
NELFCD-206ENST00000478389 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
NELFCD-206ENST00000478389 UBE2Q2Q8WVN8 375 aa12.18□□□□□ -0.46
NELFCD-206ENST00000478389 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
NELFCD-206ENST00000478389 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
NELFCD-206ENST00000478389 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
NELFCD-206ENST00000478389 PKNOX2Q96KN3 472 aa12.09□□□□□ -0.47
NELFCD-206ENST00000478389 WRNQ14191 1432 aaPredicted RBP eCLIP12.09□□□□□ -0.47
NELFCD-206ENST00000478389 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
NELFCD-206ENST00000478389 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
NELFCD-206ENST00000478389 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
NELFCD-206ENST00000478389 MROH2BQ7Z745 1585 aa12.08□□□□□ -0.48
NELFCD-206ENST00000478389 SLC4A1APQ9BWU0 796 aaKnown RBP12.08□□□□□ -0.48
NELFCD-206ENST00000478389 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
NELFCD-206ENST00000478389 SAMD1Q6SPF0 538 aaPredicted RBP12.04□□□□□ -0.48
NELFCD-206ENST00000478389 SMARCA4P51532 1647 aa12.02□□□□□ -0.49
NELFCD-206ENST00000478389 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.49
NELFCD-206ENST00000478389 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
NELFCD-206ENST00000478389 CCDC136Q96JN2 1154 aa12.01□□□□□ -0.49
NELFCD-206ENST00000478389 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
NELFCD-206ENST00000478389 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms