RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 EVX2Q03828 476 aa6.67□□□□□ -1.34
POLR2B-208ENST00000478188 MLECQ14165 292 aa6.67□□□□□ -1.34
POLR2B-208ENST00000478188 CEBPAP49715 358 aaPredicted RBP6.67□□□□□ -1.34
POLR2B-208ENST00000478188 PLA2R1Q13018 1463 aa6.67□□□□□ -1.34
POLR2B-208ENST00000478188 ROCK1Q13464 1354 aa6.66□□□□□ -1.34
POLR2B-208ENST00000478188 A2ML1A8K2U0 1454 aa6.66□□□□□ -1.34
POLR2B-208ENST00000478188 UHRF1BP1Q6BDS2 1440 aa6.66□□□□□ -1.34
POLR2B-208ENST00000478188 SPDYE4A6NLX3 237 aa6.65□□□□□ -1.34
POLR2B-208ENST00000478188 MYO5BQ9ULV0 1848 aa6.65□□□□□ -1.34
POLR2B-208ENST00000478188 STRCP1A6NGW2 1772 aa6.64□□□□□ -1.35
POLR2B-208ENST00000478188 NLRP1Q9C000 1473 aa6.64□□□□□ -1.35
POLR2B-208ENST00000478188 NOS1P29475 1434 aa6.63□□□□□ -1.35
POLR2B-208ENST00000478188 UGGT1Q9NYU2 1555 aa6.63□□□□□ -1.35
POLR2B-208ENST00000478188 ANKRD30AQ9BXX3 1397 aa6.63□□□□□ -1.35
POLR2B-208ENST00000478188 ARHGAP23Q9P227 1491 aa6.63□□□□□ -1.35
POLR2B-208ENST00000478188 SLIT1O75093 1534 aa6.63□□□□□ -1.35
POLR2B-208ENST00000478188 CFAP65Q6ZU64 1925 aaKnown RBP6.63□□□□□ -1.35
POLR2B-208ENST00000478188 FARP1Q9Y4F1 1045 aaPredicted RBP6.63□□□□□ -1.35
POLR2B-208ENST00000478188 MED14O60244 1454 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 SPHKAPQ2M3C7 1700 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 KIF3BO15066 747 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 IQGAP1P46940 1657 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 ANKRD50Q9ULJ7 1429 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 ADGRB3O60242 1522 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 TSPY4P0CV99 314 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 TSPY10P0CW01 314 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 TMEM131LA2VDJ0 1609 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 TNRQ92752 1358 aa6.62□□□□□ -1.35
POLR2B-208ENST00000478188 RPRD2Q5VT52 1461 aaKnown RBP6.62□□□□□ -1.35
POLR2B-208ENST00000478188 HSPA2P54652 639 aa6.61□□□□□ -1.35
POLR2B-208ENST00000478188 XIRP1Q702N8 1843 aaKnown RBP6.61□□□□□ -1.35
POLR2B-208ENST00000478188 NAIPQ13075 1403 aa6.61□□□□□ -1.35
POLR2B-208ENST00000478188 FKBP8Q14318 412 aa6.61□□□□□ -1.35
POLR2B-208ENST00000478188 GGT6Q6P531 493 aa6.61□□□□□ -1.35
POLR2B-208ENST00000478188 MYT1LQ9UL68 1186 aa6.61□□□□□ -1.35
POLR2B-208ENST00000478188 FBXO31Q5XUX0 539 aaPredicted RBP6.6□□□□□ -1.35
POLR2B-208ENST00000478188 ALKQ9UM73 1620 aa6.59□□□□□ -1.35
POLR2B-208ENST00000478188 CD44P16070 742 aaKnown RBP6.59□□□□□ -1.35
POLR2B-208ENST00000478188 RRP7BPQ9NSQ0 103 aa6.59□□□□□ -1.35
POLR2B-208ENST00000478188 HFM1A2PYH4 1435 aa6.59□□□□□ -1.35
POLR2B-208ENST00000478188 GABBR2O75899 941 aa6.58□□□□□ -1.36
POLR2B-208ENST00000478188 CLTCL1P53675 1640 aa6.58□□□□□ -1.36
POLR2B-208ENST00000478188 NRXN3Q9Y4C0 1643 aa6.58□□□□□ -1.36
POLR2B-208ENST00000478188 SETD1AO15047 1707 aaKnown RBP6.58□□□□□ -1.36
POLR2B-208ENST00000478188 CLCN6P51797 869 aa6.58□□□□□ -1.36
POLR2B-208ENST00000478188 NWD1Q149M9 1564 aa6.58□□□□□ -1.36
POLR2B-208ENST00000478188 TRPM2O94759 1503 aa6.57□□□□□ -1.36
POLR2B-208ENST00000478188 CHIC2Q9UKJ5 165 aa6.57□□□□□ -1.36
POLR2B-208ENST00000478188 WASHC2CQ9Y4E1 1318 aa6.57□□□□□ -1.36
POLR2B-208ENST00000478188 IFT172Q9UG01 1749 aa6.57□□□□□ -1.36
POLR2B-208ENST00000478188 ZFYVE9O95405 1425 aa6.57□□□□□ -1.36
POLR2B-208ENST00000478188 FAM50AQ14320 339 aaKnown RBP6.56□□□□□ -1.36
POLR2B-208ENST00000478188 PPARGC1BQ86YN6 1023 aaKnown RBP6.56□□□□□ -1.36
POLR2B-208ENST00000478188 CPS1P31327 1500 aa6.56□□□□□ -1.36
POLR2B-208ENST00000478188 CHD2O14647 1828 aaKnown RBP6.54□□□□□ -1.36
POLR2B-208ENST00000478188 SCAF11Q99590 1463 aaKnown RBP6.54□□□□□ -1.36
POLR2B-208ENST00000478188 PPLO60437 1756 aa6.54□□□□□ -1.36
POLR2B-208ENST00000478188 KANK1Q14678 1352 aa6.54□□□□□ -1.36
POLR2B-208ENST00000478188 NCKAP5LQ9HCH0 1330 aa6.54□□□□□ -1.36
POLR2B-208ENST00000478188 CREBZFQ9NS37 354 aa6.54□□□□□ -1.36
POLR2B-208ENST00000478188 NEXMIFQ5QGS0 1516 aa6.54□□□□□ -1.36
POLR2B-208ENST00000478188 KIF1BO60333 1816 aa6.54□□□□□ -1.36
POLR2B-208ENST00000478188 ESF1Q9H501 851 aaKnown RBP6.53□□□□□ -1.36
POLR2B-208ENST00000478188 NPHP4O75161 1426 aaPredicted RBP6.53□□□□□ -1.36
POLR2B-208ENST00000478188 PKD2Q13563 968 aa6.53□□□□□ -1.36
POLR2B-208ENST00000478188 XRN1Q8IZH2 1706 aaKnown RBP6.52□□□□□ -1.36
POLR2B-208ENST00000478188 DIP2AQ14689 1571 aa6.52□□□□□ -1.37
POLR2B-208ENST00000478188 SETBP1Q9Y6X0 1596 aa6.52□□□□□ -1.37
POLR2B-208ENST00000478188 TMEM2Q9UHN6 1383 aa6.52□□□□□ -1.37
POLR2B-208ENST00000478188 PAK3O75914 559 aaPredicted RBP6.52□□□□□ -1.37
POLR2B-208ENST00000478188 LRP5O75197 1615 aa6.51□□□□□ -1.37
POLR2B-208ENST00000478188 ZRANB1Q9UGI0 708 aa6.51□□□□□ -1.37
POLR2B-208ENST00000478188 LRRC7Q96NW7 1537 aa6.5□□□□□ -1.37
POLR2B-208ENST00000478188 LTKP29376 864 aa6.5□□□□□ -1.37
POLR2B-208ENST00000478188 NUP155O75694 1391 aa6.5□□□□□ -1.37
POLR2B-208ENST00000478188 IDI1Q13907 227 aa6.5□□□□□ -1.37
POLR2B-208ENST00000478188 ADAMTS13Q76LX8 1427 aa6.5□□□□□ -1.37
POLR2B-208ENST00000478188 ZNF335Q9H4Z2 1342 aaPredicted RBP6.5□□□□□ -1.37
POLR2B-208ENST00000478188 PLEKHG1Q9ULL1 1385 aa6.48□□□□□ -1.37
POLR2B-208ENST00000478188 PRAG1Q86YV5 1406 aa6.48□□□□□ -1.37
POLR2B-208ENST00000478188 RIMS2Q9UQ26 1411 aa6.48□□□□□ -1.37
POLR2B-208ENST00000478188 THEMISQ8N1K5 641 aaPredicted RBP6.48□□□□□ -1.37
POLR2B-208ENST00000478188 ZNF579Q8NAF0 562 aaKnown RBP6.48□□□□□ -1.37
POLR2B-208ENST00000478188 CDK12Q9NYV4 1490 aaPredicted RBP6.48□□□□□ -1.37
POLR2B-208ENST00000478188 PROM2Q8N271 834 aa6.48□□□□□ -1.37
POLR2B-208ENST00000478188 NKTRP30414 1462 aaKnown RBP6.48□□□□□ -1.37
POLR2B-208ENST00000478188 SPATA31E1Q6ZUB1 1445 aa6.47□□□□□ -1.37
POLR2B-208ENST00000478188 SLC52A1Q9NWF4 448 aa6.47□□□□□ -1.37
POLR2B-208ENST00000478188 KNDC1Q76NI1 1749 aa6.47□□□□□ -1.37
POLR2B-208ENST00000478188 ASXL1Q8IXJ9 1541 aa6.47□□□□□ -1.37
POLR2B-208ENST00000478188 DCBLD2Q96PD2 775 aa6.47□□□□□ -1.37
POLR2B-208ENST00000478188 ITGAEP38570 1179 aa6.46□□□□□ -1.38
POLR2B-208ENST00000478188 PTPRUQ92729 1446 aa6.46□□□□□ -1.38
POLR2B-208ENST00000478188 SETD5Q9C0A6 1442 aa6.46□□□□□ -1.38
POLR2B-208ENST00000478188 NRXN1Q9ULB1 1477 aa6.46□□□□□ -1.38
POLR2B-208ENST00000478188 NALCNQ8IZF0 1738 aa6.46□□□□□ -1.38
POLR2B-208ENST00000478188 ANKLE2Q86XL3 938 aa6.46□□□□□ -1.38
POLR2B-208ENST00000478188 PLEKHG5O94827 1062 aa6.45□□□□□ -1.38
POLR2B-208ENST00000478188 RAB3GAP2Q9H2M9 1393 aa6.44□□□□□ -1.38
POLR2B-208ENST00000478188 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms