RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TRPM2O94759 1503 aa15.19■□□□□ 0.02
HDAC6-222ENST00000478095 LTKP29376 864 aa15.19■□□□□ 0.02
HDAC6-222ENST00000478095 TXNDC2Q86VQ3 553 aa15.19■□□□□ 0.02
HDAC6-222ENST00000478095 ARHGAP23Q9P227 1491 aa15.19■□□□□ 0.02
HDAC6-222ENST00000478095 SLIT1O75093 1534 aa15.18■□□□□ 0.02
HDAC6-222ENST00000478095 HRCP23327 699 aa15.18■□□□□ 0.02
HDAC6-222ENST00000478095 NEURL4Q96JN8 1562 aa15.18■□□□□ 0.02
HDAC6-222ENST00000478095 NPHP4O75161 1426 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-222ENST00000478095 SPHKAPQ2M3C7 1700 aa15.17■□□□□ 0.02
HDAC6-222ENST00000478095 SCAF11Q99590 1463 aaKnown RBP15.17■□□□□ 0.02
HDAC6-222ENST00000478095 EID1Q9Y6B2 187 aa15.17■□□□□ 0.02
HDAC6-222ENST00000478095 NUTM2DQ5VT03 806 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-222ENST00000478095 CLTCL1P53675 1640 aa15.16■□□□□ 0.02
HDAC6-222ENST00000478095 TMEM131LA2VDJ0 1609 aa15.15■□□□□ 0.02
HDAC6-222ENST00000478095 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
HDAC6-222ENST00000478095 RIMS2Q9UQ26 1411 aa15.15■□□□□ 0.02
HDAC6-222ENST00000478095 CCDC144AA2RUR9 1427 aa15.14■□□□□ 0.01
HDAC6-222ENST00000478095 ZNF335Q9H4Z2 1342 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-222ENST00000478095 MED14O60244 1454 aa15.14■□□□□ 0.01
HDAC6-222ENST00000478095 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-222ENST00000478095 ZFYVE9O95405 1425 aa15.13■□□□□ 0.01
HDAC6-222ENST00000478095 KDM5AP29375 1690 aaKnown RBP15.12■□□□□ 0.01
HDAC6-222ENST00000478095 POLR1AO95602 1720 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-222ENST00000478095 BCANQ96GW7 911 aa15.11■□□□□ 0.01
HDAC6-222ENST00000478095 FOXD4L1Q9NU39 408 aa15.1■□□□□ 0.01
HDAC6-222ENST00000478095 HDGFP51858 240 aaKnown RBP15.09■□□□□ 0.01
HDAC6-222ENST00000478095 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.09■□□□□ 0.01
HDAC6-222ENST00000478095 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
HDAC6-222ENST00000478095 RGL3Q3MIN7 710 aa15.08■□□□□ 0
HDAC6-222ENST00000478095 IQGAP1P46940 1657 aa15.08■□□□□ 0
HDAC6-222ENST00000478095 ANKRD30BQ9BXX2 1392 aa15.08■□□□□ 0
HDAC6-222ENST00000478095 PLEKHG1Q9ULL1 1385 aa15.08■□□□□ 0
HDAC6-222ENST00000478095 MYO5BQ9ULV0 1848 aa15.07■□□□□ 0
HDAC6-222ENST00000478095 PCGF6Q9BYE7 350 aa15.06■□□□□ 0
HDAC6-222ENST00000478095 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
HDAC6-222ENST00000478095 LTBP4Q8N2S1 1624 aa15.04■□□□□ -0
HDAC6-222ENST00000478095 NEXMIFQ5QGS0 1516 aa15.04■□□□□ -0
HDAC6-222ENST00000478095 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
HDAC6-222ENST00000478095 CERKQ8TCT0 537 aa15.04■□□□□ -0
HDAC6-222ENST00000478095 DHX57Q6P158 1386 aaKnown RBP15.02■□□□□ -0
HDAC6-222ENST00000478095 RPGRIP1LQ68CZ1 1315 aa15.02■□□□□ -0
HDAC6-222ENST00000478095 ADAMTS13Q76LX8 1427 aa15.01□□□□□ -0.01
HDAC6-222ENST00000478095 KIF1BO60333 1816 aa15.01□□□□□ -0.01
HDAC6-222ENST00000478095 VGFO15240 615 aaPredicted RBP15□□□□□ -0.01
HDAC6-222ENST00000478095 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
HDAC6-222ENST00000478095 ADGRF5Q8IZF2 1346 aa14.99□□□□□ -0.01
HDAC6-222ENST00000478095 TBX22Q9Y458 520 aa14.99□□□□□ -0.01
HDAC6-222ENST00000478095 CAPN15O75808 1086 aa14.98□□□□□ -0.01
HDAC6-222ENST00000478095 CPS1P31327 1500 aa14.97□□□□□ -0.01
HDAC6-222ENST00000478095 KCNA6P17658 529 aa14.97□□□□□ -0.01
HDAC6-222ENST00000478095 SETBP1Q9Y6X0 1596 aa14.96□□□□□ -0.01
HDAC6-222ENST00000478095 NRXN3Q9Y4C0 1643 aa14.95□□□□□ -0.02
HDAC6-222ENST00000478095 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
HDAC6-222ENST00000478095 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
HDAC6-222ENST00000478095 METP08581 1390 aa14.95□□□□□ -0.02
HDAC6-222ENST00000478095 DIP2AQ14689 1571 aa14.94□□□□□ -0.02
HDAC6-222ENST00000478095 LRRC7Q96NW7 1537 aa14.94□□□□□ -0.02
HDAC6-222ENST00000478095 KDM2AQ9Y2K7 1162 aa14.94□□□□□ -0.02
HDAC6-222ENST00000478095 PTPRUQ92729 1446 aa14.93□□□□□ -0.02
HDAC6-222ENST00000478095 NEUROD1Q13562 356 aa14.93□□□□□ -0.02
HDAC6-222ENST00000478095 DCAF11Q8TEB1 546 aa14.93□□□□□ -0.02
HDAC6-222ENST00000478095 SPINK5Q9NQ38 1064 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-222ENST00000478095 STRCP1A6NGW2 1772 aa14.93□□□□□ -0.02
HDAC6-222ENST00000478095 ZBTB22O15209 634 aa14.92□□□□□ -0.02
HDAC6-222ENST00000478095 PROSER2Q86WR7 435 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-222ENST00000478095 AMOTL2Q9Y2J4 779 aa14.92□□□□□ -0.02
HDAC6-222ENST00000478095 PIK3R4Q99570 1358 aa14.92□□□□□ -0.02
HDAC6-222ENST00000478095 PPLO60437 1756 aa14.92□□□□□ -0.02
HDAC6-222ENST00000478095 NWD1Q149M9 1564 aa14.91□□□□□ -0.02
HDAC6-222ENST00000478095 MYOM2P54296 1465 aa14.91□□□□□ -0.02
HDAC6-222ENST00000478095 TMEM94Q12767 1356 aa14.91□□□□□ -0.02
HDAC6-222ENST00000478095 PIK3C2GO75747 1445 aa14.91□□□□□ -0.02
HDAC6-222ENST00000478095 NKTRP30414 1462 aaKnown RBP14.9□□□□□ -0.02
HDAC6-222ENST00000478095 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
HDAC6-222ENST00000478095 ALKQ9UM73 1620 aa14.9□□□□□ -0.02
HDAC6-222ENST00000478095 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
HDAC6-222ENST00000478095 UBAP1LF5GYI3 381 aa14.89□□□□□ -0.03
HDAC6-222ENST00000478095 ILDR1Q86SU0 546 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-222ENST00000478095 IFT172Q9UG01 1749 aa14.89□□□□□ -0.03
HDAC6-222ENST00000478095 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
HDAC6-222ENST00000478095 CFAP70Q5T0N1 1121 aa14.88□□□□□ -0.03
HDAC6-222ENST00000478095 TMEM132EQ6IEE7 984 aa14.87□□□□□ -0.03
HDAC6-222ENST00000478095 STK26Q9P289 416 aa14.86□□□□□ -0.03
HDAC6-222ENST00000478095 C14orf37Q86TY3 774 aa14.85□□□□□ -0.03
HDAC6-222ENST00000478095 L3MBTL2Q969R5 705 aa14.85□□□□□ -0.03
HDAC6-222ENST00000478095 C14orf93Q9H972 538 aaKnown RBP14.85□□□□□ -0.03
HDAC6-222ENST00000478095 ASXL1Q8IXJ9 1541 aa14.84□□□□□ -0.03
HDAC6-222ENST00000478095 ROBO2Q9HCK4 1378 aa14.84□□□□□ -0.03
HDAC6-222ENST00000478095 SETD1AO15047 1707 aaKnown RBP14.83□□□□□ -0.03
HDAC6-222ENST00000478095 XRN1Q8IZH2 1706 aaKnown RBP14.83□□□□□ -0.03
HDAC6-222ENST00000478095 CHD2O14647 1828 aaKnown RBP14.83□□□□□ -0.04
HDAC6-222ENST00000478095 TOM1O60784 492 aa14.83□□□□□ -0.04
HDAC6-222ENST00000478095 PIP4K2BP78356 416 aa14.83□□□□□ -0.04
HDAC6-222ENST00000478095 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
HDAC6-222ENST00000478095 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
HDAC6-222ENST00000478095 MSH6P52701 1360 aa14.82□□□□□ -0.04
HDAC6-222ENST00000478095 PTCH1Q13635 1447 aa14.81□□□□□ -0.04
HDAC6-222ENST00000478095 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-222ENST00000478095 TONSLQ96HA7 1378 aa14.8□□□□□ -0.04
HDAC6-222ENST00000478095 PRAG1Q86YV5 1406 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms