RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
TNRC6A-206ENST00000477487 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.25
TNRC6A-206ENST00000477487 TAOK2Q9UL54 1235 aa16.58■□□□□ 0.25
TNRC6A-206ENST00000477487 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
TNRC6A-206ENST00000477487 MYO5BQ9ULV0 1848 aa16.57■□□□□ 0.24
TNRC6A-206ENST00000477487 TULP1O00294 542 aaPredicted RBP16.57■□□□□ 0.24
TNRC6A-206ENST00000477487 AGLP35573 1532 aa16.56■□□□□ 0.24
TNRC6A-206ENST00000477487 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
TNRC6A-206ENST00000477487 REREQ9P2R6 1566 aa16.56■□□□□ 0.24
TNRC6A-206ENST00000477487 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
TNRC6A-206ENST00000477487 CNTLNQ9NXG0 1405 aa16.55■□□□□ 0.24
TNRC6A-206ENST00000477487 CEBPAP49715 358 aaPredicted RBP16.54■□□□□ 0.24
TNRC6A-206ENST00000477487 ZC3H13Q5T200 1668 aaKnown RBP16.54■□□□□ 0.24
TNRC6A-206ENST00000477487 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
TNRC6A-206ENST00000477487 PIK3C2BO00750 1634 aa16.53■□□□□ 0.24
TNRC6A-206ENST00000477487 ARHGAP31Q2M1Z3 1444 aa16.52■□□□□ 0.24
TNRC6A-206ENST00000477487 TMEM132EQ6IEE7 984 aa16.51■□□□□ 0.23
TNRC6A-206ENST00000477487 ERVK-7P63135 1459 aa16.51■□□□□ 0.23
TNRC6A-206ENST00000477487 GPRASP1Q5JY77 1395 aa16.5■□□□□ 0.23
TNRC6A-206ENST00000477487 PPLO60437 1756 aa16.49■□□□□ 0.23
TNRC6A-206ENST00000477487 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
TNRC6A-206ENST00000477487 TESK2Q96S53 571 aa16.48■□□□□ 0.23
TNRC6A-206ENST00000477487 DISP3Q9P2K9 1392 aa16.48■□□□□ 0.23
TNRC6A-206ENST00000477487 POLR1AO95602 1720 aaPredicted RBP16.46■□□□□ 0.23
TNRC6A-206ENST00000477487 TMEM131LA2VDJ0 1609 aa16.46■□□□□ 0.23
TNRC6A-206ENST00000477487 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
TNRC6A-206ENST00000477487 ESF1Q9H501 851 aaKnown RBP16.45■□□□□ 0.22
TNRC6A-206ENST00000477487 CCDC184Q52MB2 194 aa16.45■□□□□ 0.22
TNRC6A-206ENST00000477487 MYOM2P54296 1465 aa16.44■□□□□ 0.22
TNRC6A-206ENST00000477487 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
TNRC6A-206ENST00000477487 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
TNRC6A-206ENST00000477487 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
TNRC6A-206ENST00000477487 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
TNRC6A-206ENST00000477487 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
TNRC6A-206ENST00000477487 ANP32CO43423 234 aa16.42■□□□□ 0.22
TNRC6A-206ENST00000477487 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
TNRC6A-206ENST00000477487 PIK3C2GO75747 1445 aa16.42■□□□□ 0.22
TNRC6A-206ENST00000477487 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
TNRC6A-206ENST00000477487 SPATA31D1Q6ZQQ2 1576 aa16.41■□□□□ 0.22
TNRC6A-206ENST00000477487 LAMC1P11047 1609 aa16.41■□□□□ 0.22
TNRC6A-206ENST00000477487 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.22
TNRC6A-206ENST00000477487 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.22
TNRC6A-206ENST00000477487 C14orf93Q9H972 538 aaKnown RBP16.39■□□□□ 0.21
TNRC6A-206ENST00000477487 SCAF11Q99590 1463 aaKnown RBP16.38■□□□□ 0.21
TNRC6A-206ENST00000477487 STK26Q9P289 416 aa16.38■□□□□ 0.21
TNRC6A-206ENST00000477487 A2ML1A8K2U0 1454 aa16.38■□□□□ 0.21
TNRC6A-206ENST00000477487 SAFB2Q14151 953 aaKnown RBP eCLIP16.38■□□□□ 0.21
TNRC6A-206ENST00000477487 CENPBP07199 599 aaPredicted RBP16.37■□□□□ 0.21
TNRC6A-206ENST00000477487 ADGRB1O14514 1584 aa16.37■□□□□ 0.21
TNRC6A-206ENST00000477487 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
TNRC6A-206ENST00000477487 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
TNRC6A-206ENST00000477487 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
TNRC6A-206ENST00000477487 TPRNQ4KMQ1 711 aa16.35■□□□□ 0.21
TNRC6A-206ENST00000477487 RPGRIP1LQ68CZ1 1315 aa16.35■□□□□ 0.21
TNRC6A-206ENST00000477487 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
TNRC6A-206ENST00000477487 TNRQ92752 1358 aa16.34■□□□□ 0.21
TNRC6A-206ENST00000477487 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
TNRC6A-206ENST00000477487 FER1L4A9Z1Z3 1794 aa16.34■□□□□ 0.21
TNRC6A-206ENST00000477487 C3P01024 1663 aa16.34■□□□□ 0.21
TNRC6A-206ENST00000477487 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
TNRC6A-206ENST00000477487 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
TNRC6A-206ENST00000477487 TMF1P82094 1093 aa16.32■□□□□ 0.2
TNRC6A-206ENST00000477487 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
TNRC6A-206ENST00000477487 PANK3Q9H999 370 aa16.3■□□□□ 0.2
TNRC6A-206ENST00000477487 PTPRMP28827 1452 aa16.29■□□□□ 0.2
TNRC6A-206ENST00000477487 LTKP29376 864 aa16.28■□□□□ 0.2
TNRC6A-206ENST00000477487 ZFYVE9O95405 1425 aa16.28■□□□□ 0.2
TNRC6A-206ENST00000477487 CENPJQ9HC77 1338 aaPredicted RBP16.28■□□□□ 0.2
TNRC6A-206ENST00000477487 SETBP1Q9Y6X0 1596 aa16.28■□□□□ 0.2
TNRC6A-206ENST00000477487 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.2
TNRC6A-206ENST00000477487 UBR1Q8IWV7 1749 aa16.27■□□□□ 0.2
TNRC6A-206ENST00000477487 ALKQ9UM73 1620 aa16.27■□□□□ 0.2
TNRC6A-206ENST00000477487 PER1O15534 1290 aaPredicted RBP16.27■□□□□ 0.19
TNRC6A-206ENST00000477487 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
TNRC6A-206ENST00000477487 QRICH2Q9H0J4 1663 aa16.25■□□□□ 0.19
TNRC6A-206ENST00000477487 BCANQ96GW7 911 aa16.25■□□□□ 0.19
TNRC6A-206ENST00000477487 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
TNRC6A-206ENST00000477487 CCER2I3L3R5 266 aa16.25■□□□□ 0.19
TNRC6A-206ENST00000477487 WAPLQ7Z5K2 1190 aa16.25■□□□□ 0.19
TNRC6A-206ENST00000477487 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
TNRC6A-206ENST00000477487 EIF3AQ14152 1382 aaKnown RBP16.24■□□□□ 0.19
TNRC6A-206ENST00000477487 MYOM1P52179 1685 aa16.24■□□□□ 0.19
TNRC6A-206ENST00000477487 METP08581 1390 aa16.24■□□□□ 0.19
TNRC6A-206ENST00000477487 PRAM1Q96QH2 718 aa16.23■□□□□ 0.19
TNRC6A-206ENST00000477487 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
TNRC6A-206ENST00000477487 PLEKHH1Q9ULM0 1364 aa16.23■□□□□ 0.19
TNRC6A-206ENST00000477487 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
TNRC6A-206ENST00000477487 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
TNRC6A-206ENST00000477487 SLC26A8Q96RN1 970 aa16.22■□□□□ 0.19
TNRC6A-206ENST00000477487 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
TNRC6A-206ENST00000477487 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
TNRC6A-206ENST00000477487 MYO3AQ8NEV4 1616 aa16.22■□□□□ 0.19
TNRC6A-206ENST00000477487 FAM9BQ8IZU0 186 aa16.21■□□□□ 0.19
TNRC6A-206ENST00000477487 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
TNRC6A-206ENST00000477487 SLC12A5Q9H2X9 1139 aa16.21■□□□□ 0.19
TNRC6A-206ENST00000477487 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
TNRC6A-206ENST00000477487 HOMEZQ8IX15 550 aa16.19■□□□□ 0.18
TNRC6A-206ENST00000477487 CARD14Q9BXL6 1004 aa16.19■□□□□ 0.18
TNRC6A-206ENST00000477487 TULP4Q9NRJ4 1543 aa16.19■□□□□ 0.18
TNRC6A-206ENST00000477487 TMC1Q8TDI8 760 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms