RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ABCA9Q8IUA7 1624 aa17.2■□□□□ 0.34
CCNL1-216ENST00000475298 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
CCNL1-216ENST00000475298 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
CCNL1-216ENST00000475298 GSE1Q14687 1217 aa17.2■□□□□ 0.34
CCNL1-216ENST00000475298 KIF3BO15066 747 aa17.2■□□□□ 0.34
CCNL1-216ENST00000475298 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
CCNL1-216ENST00000475298 DEPDC5O75140 1603 aa17.19■□□□□ 0.34
CCNL1-216ENST00000475298 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
CCNL1-216ENST00000475298 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
CCNL1-216ENST00000475298 ADGRL1O94910 1474 aa17.18■□□□□ 0.34
CCNL1-216ENST00000475298 CEP152O94986 1710 aa17.18■□□□□ 0.34
CCNL1-216ENST00000475298 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
CCNL1-216ENST00000475298 PTPRTO14522 1441 aa17.17■□□□□ 0.34
CCNL1-216ENST00000475298 TET3O43151 1660 aa17.16■□□□□ 0.34
CCNL1-216ENST00000475298 ASXL2Q76L83 1435 aa17.16■□□□□ 0.34
CCNL1-216ENST00000475298 UGGT1Q9NYU2 1555 aa17.15■□□□□ 0.34
CCNL1-216ENST00000475298 IQGAP1P46940 1657 aa17.15■□□□□ 0.34
CCNL1-216ENST00000475298 KANK1Q14678 1352 aa17.13■□□□□ 0.33
CCNL1-216ENST00000475298 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
CCNL1-216ENST00000475298 MROH1Q8NDA8 1641 aa17.12■□□□□ 0.33
CCNL1-216ENST00000475298 FRAT1Q92837 279 aaPredicted RBP17.11■□□□□ 0.33
CCNL1-216ENST00000475298 PDE4AP27815 886 aa17.11■□□□□ 0.33
CCNL1-216ENST00000475298 CDCA7LQ96GN5 454 aa17.11■□□□□ 0.33
CCNL1-216ENST00000475298 SCAF11Q99590 1463 aaKnown RBP17.1■□□□□ 0.33
CCNL1-216ENST00000475298 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
CCNL1-216ENST00000475298 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.33
CCNL1-216ENST00000475298 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.32
CCNL1-216ENST00000475298 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
CCNL1-216ENST00000475298 NFKBIBQ15653 356 aa17.07■□□□□ 0.32
CCNL1-216ENST00000475298 CFAP70Q5T0N1 1121 aa17.07■□□□□ 0.32
CCNL1-216ENST00000475298 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
CCNL1-216ENST00000475298 RRP1P56182 461 aaKnown RBP17.07■□□□□ 0.32
CCNL1-216ENST00000475298 RCAN3Q9UKA8 241 aa17.07■□□□□ 0.32
CCNL1-216ENST00000475298 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
CCNL1-216ENST00000475298 BLMP54132 1417 aaPredicted RBP17.06■□□□□ 0.32
CCNL1-216ENST00000475298 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
CCNL1-216ENST00000475298 PPRC1Q5VV67 1664 aaKnown RBP17.04■□□□□ 0.32
CCNL1-216ENST00000475298 EFCAB6Q5THR3 1501 aa17.04■□□□□ 0.32
CCNL1-216ENST00000475298 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
CCNL1-216ENST00000475298 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
CCNL1-216ENST00000475298 ADAMTS8Q9UP79 889 aa17.03■□□□□ 0.32
CCNL1-216ENST00000475298 ABCA6Q8N139 1617 aa17.03■□□□□ 0.32
CCNL1-216ENST00000475298 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
CCNL1-216ENST00000475298 MYOM1P52179 1685 aa17.03■□□□□ 0.32
CCNL1-216ENST00000475298 STAC3Q96MF2 364 aa17.02■□□□□ 0.32
CCNL1-216ENST00000475298 SYNMO15061 1565 aa17.02■□□□□ 0.32
CCNL1-216ENST00000475298 PDE3BQ13370 1112 aa17.02■□□□□ 0.31
CCNL1-216ENST00000475298 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.31
CCNL1-216ENST00000475298 MAP3K4Q9Y6R4 1608 aa17.02■□□□□ 0.31
CCNL1-216ENST00000475298 KIF1BO60333 1816 aa17.01■□□□□ 0.31
CCNL1-216ENST00000475298 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
CCNL1-216ENST00000475298 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCNL1-216ENST00000475298 CHGAP10645 457 aaKnown RBP17.01■□□□□ 0.31
CCNL1-216ENST00000475298 MS4A1P11836 297 aa17.01■□□□□ 0.31
CCNL1-216ENST00000475298 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
CCNL1-216ENST00000475298 EIF3AQ14152 1382 aaKnown RBP17■□□□□ 0.31
CCNL1-216ENST00000475298 ZMYND15Q9H091 742 aa17■□□□□ 0.31
CCNL1-216ENST00000475298 KIAA1210Q9ULL0 1709 aa16.99■□□□□ 0.31
CCNL1-216ENST00000475298 PLIN1O60240 522 aa16.99■□□□□ 0.31
CCNL1-216ENST00000475298 GGT6Q6P531 493 aa16.99■□□□□ 0.31
CCNL1-216ENST00000475298 CD109Q6YHK3 1445 aa16.98■□□□□ 0.31
CCNL1-216ENST00000475298 MYOM2P54296 1465 aa16.98■□□□□ 0.31
CCNL1-216ENST00000475298 ASXL1Q8IXJ9 1541 aa16.98■□□□□ 0.31
CCNL1-216ENST00000475298 KDM5AP29375 1690 aaKnown RBP16.97■□□□□ 0.31
CCNL1-216ENST00000475298 IFT172Q9UG01 1749 aa16.97■□□□□ 0.31
CCNL1-216ENST00000475298 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
CCNL1-216ENST00000475298 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
CCNL1-216ENST00000475298 ZMYM4Q5VZL5 1548 aa16.97■□□□□ 0.31
CCNL1-216ENST00000475298 NOS1P29475 1434 aa16.97■□□□□ 0.31
CCNL1-216ENST00000475298 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
CCNL1-216ENST00000475298 FRMPD1Q5SYB0 1578 aa16.96■□□□□ 0.31
CCNL1-216ENST00000475298 INSRP06213 1382 aa16.96■□□□□ 0.31
CCNL1-216ENST00000475298 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCNL1-216ENST00000475298 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.3
CCNL1-216ENST00000475298 GLIPR1L2Q4G1C9 344 aa16.95■□□□□ 0.3
CCNL1-216ENST00000475298 PLEKHH1Q9ULM0 1364 aa16.95■□□□□ 0.3
CCNL1-216ENST00000475298 NPATQ14207 1427 aa16.95■□□□□ 0.3
CCNL1-216ENST00000475298 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
CCNL1-216ENST00000475298 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
CCNL1-216ENST00000475298 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
CCNL1-216ENST00000475298 ADGRB3O60242 1522 aa16.93■□□□□ 0.3
CCNL1-216ENST00000475298 RAPGEF3O95398 923 aa16.92■□□□□ 0.3
CCNL1-216ENST00000475298 SLC4A3P48751 1232 aa16.92■□□□□ 0.3
CCNL1-216ENST00000475298 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
CCNL1-216ENST00000475298 TRAK1Q9UPV9 953 aa16.92■□□□□ 0.3
CCNL1-216ENST00000475298 NRXN1Q9ULB1 1477 aa16.91■□□□□ 0.3
CCNL1-216ENST00000475298 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
CCNL1-216ENST00000475298 HECW2Q9P2P5 1572 aa16.91■□□□□ 0.3
CCNL1-216ENST00000475298 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
CCNL1-216ENST00000475298 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
CCNL1-216ENST00000475298 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
CCNL1-216ENST00000475298 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
CCNL1-216ENST00000475298 CFAP74Q9C0B2 1584 aa16.89■□□□□ 0.29
CCNL1-216ENST00000475298 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
CCNL1-216ENST00000475298 C20orf194Q5TEA3 1177 aa16.88■□□□□ 0.29
CCNL1-216ENST00000475298 CRBNQ96SW2 442 aa16.88■□□□□ 0.29
CCNL1-216ENST00000475298 FRAT2O75474 233 aaPredicted RBP16.88■□□□□ 0.29
CCNL1-216ENST00000475298 AEBP2Q6ZN18 517 aaPredicted RBP16.88■□□□□ 0.29
CCNL1-216ENST00000475298 CENPJQ9HC77 1338 aaPredicted RBP16.88■□□□□ 0.29
CCNL1-216ENST00000475298 PPLO60437 1756 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms