RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 ZNF518AQ6AHZ1 1483 aa12.65□□□□□ -0.39
TOP3A-203ENST00000469739 TNNT2P45379 298 aaPredicted RBP12.65□□□□□ -0.39
TOP3A-203ENST00000469739 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.39
TOP3A-203ENST00000469739 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
TOP3A-203ENST00000469739 ZBTB22O15209 634 aa12.64□□□□□ -0.39
TOP3A-203ENST00000469739 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
TOP3A-203ENST00000469739 ADGRF5Q8IZF2 1346 aa12.64□□□□□ -0.39
TOP3A-203ENST00000469739 CD109Q6YHK3 1445 aa12.64□□□□□ -0.39
TOP3A-203ENST00000469739 UGGT1Q9NYU2 1555 aa12.64□□□□□ -0.39
TOP3A-203ENST00000469739 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-203ENST00000469739 TRAK1Q9UPV9 953 aa12.63□□□□□ -0.39
TOP3A-203ENST00000469739 LAMC1P11047 1609 aa12.63□□□□□ -0.39
TOP3A-203ENST00000469739 CLTCL1P53675 1640 aa12.63□□□□□ -0.39
TOP3A-203ENST00000469739 KANK1Q14678 1352 aa12.63□□□□□ -0.39
TOP3A-203ENST00000469739 C14orf37Q86TY3 774 aa12.63□□□□□ -0.39
TOP3A-203ENST00000469739 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
TOP3A-203ENST00000469739 RALBP1Q15311 655 aa12.62□□□□□ -0.39
TOP3A-203ENST00000469739 KNSTRNQ9Y448 316 aa12.62□□□□□ -0.39
TOP3A-203ENST00000469739 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
TOP3A-203ENST00000469739 NLRP13Q86W25 1043 aa12.62□□□□□ -0.39
TOP3A-203ENST00000469739 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
TOP3A-203ENST00000469739 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
TOP3A-203ENST00000469739 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
TOP3A-203ENST00000469739 RNF17Q9BXT8 1623 aaKnown RBP12.61□□□□□ -0.39
TOP3A-203ENST00000469739 PLIN1O60240 522 aa12.6□□□□□ -0.39
TOP3A-203ENST00000469739 WASHC2CQ9Y4E1 1318 aa12.6□□□□□ -0.39
TOP3A-203ENST00000469739 PTPRTO14522 1441 aa12.6□□□□□ -0.39
TOP3A-203ENST00000469739 ABCA6Q8N139 1617 aa12.59□□□□□ -0.39
TOP3A-203ENST00000469739 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
TOP3A-203ENST00000469739 MADDQ8WXG6 1647 aa12.59□□□□□ -0.39
TOP3A-203ENST00000469739 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
TOP3A-203ENST00000469739 CCDC136Q96JN2 1154 aa12.59□□□□□ -0.39
TOP3A-203ENST00000469739 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
TOP3A-203ENST00000469739 MAP3K4Q9Y6R4 1608 aa12.59□□□□□ -0.39
TOP3A-203ENST00000469739 EFCAB6Q5THR3 1501 aa12.59□□□□□ -0.39
TOP3A-203ENST00000469739 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
TOP3A-203ENST00000469739 RIMBP3CA6NJZ7 1639 aa12.58□□□□□ -0.39
TOP3A-203ENST00000469739 RIMBP3BA6NNM3 1639 aa12.58□□□□□ -0.39
TOP3A-203ENST00000469739 RIMBP3Q9UFD9 1639 aa12.58□□□□□ -0.39
TOP3A-203ENST00000469739 GPRASP1Q5JY77 1395 aa12.58□□□□□ -0.4
TOP3A-203ENST00000469739 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-203ENST00000469739 ADAMTS8Q9UP79 889 aa12.58□□□□□ -0.4
TOP3A-203ENST00000469739 MLH3Q9UHC1 1453 aa12.57□□□□□ -0.4
TOP3A-203ENST00000469739 MLECQ14165 292 aa12.57□□□□□ -0.4
TOP3A-203ENST00000469739 STK26Q9P289 416 aa12.57□□□□□ -0.4
TOP3A-203ENST00000469739 FANCIQ9NVI1 1328 aa12.57□□□□□ -0.4
TOP3A-203ENST00000469739 NEO1Q92859 1461 aa12.57□□□□□ -0.4
TOP3A-203ENST00000469739 DEKP35659 375 aaKnown RBP12.56□□□□□ -0.4
TOP3A-203ENST00000469739 RICTORQ6R327 1708 aa12.56□□□□□ -0.4
TOP3A-203ENST00000469739 LMTK2Q8IWU2 1503 aa12.55□□□□□ -0.4
TOP3A-203ENST00000469739 BRD4O60885 1362 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-203ENST00000469739 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
TOP3A-203ENST00000469739 KIF1BO60333 1816 aa12.54□□□□□ -0.4
TOP3A-203ENST00000469739 MROH2AA6NES4 1674 aa12.54□□□□□ -0.4
TOP3A-203ENST00000469739 NEURL4Q96JN8 1562 aa12.54□□□□□ -0.4
TOP3A-203ENST00000469739 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
TOP3A-203ENST00000469739 SKAP1Q86WV1 359 aa12.54□□□□□ -0.4
TOP3A-203ENST00000469739 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
TOP3A-203ENST00000469739 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
TOP3A-203ENST00000469739 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
TOP3A-203ENST00000469739 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-203ENST00000469739 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
TOP3A-203ENST00000469739 PARD3Q8TEW0 1356 aa12.53□□□□□ -0.4
TOP3A-203ENST00000469739 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
TOP3A-203ENST00000469739 GLI2P10070 1586 aa12.53□□□□□ -0.4
TOP3A-203ENST00000469739 DIP2CQ9Y2E4 1556 aa12.53□□□□□ -0.4
TOP3A-203ENST00000469739 RCAN3Q9UKA8 241 aa12.53□□□□□ -0.4
TOP3A-203ENST00000469739 SMG6Q86US8 1419 aaKnown RBP12.52□□□□□ -0.41
TOP3A-203ENST00000469739 SLC12A5Q9H2X9 1139 aa12.52□□□□□ -0.41
TOP3A-203ENST00000469739 NOS1P29475 1434 aa12.51□□□□□ -0.41
TOP3A-203ENST00000469739 KIAA1210Q9ULL0 1709 aa12.5□□□□□ -0.41
TOP3A-203ENST00000469739 FAM69CQ0P6D2 419 aa12.5□□□□□ -0.41
TOP3A-203ENST00000469739 LRPPRCP42704 1394 aaKnown RBP12.49□□□□□ -0.41
TOP3A-203ENST00000469739 CAMSAP1Q5T5Y3 1602 aa12.49□□□□□ -0.41
TOP3A-203ENST00000469739 FBXO31Q5XUX0 539 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-203ENST00000469739 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
TOP3A-203ENST00000469739 DIP2BQ9P265 1576 aa12.49□□□□□ -0.41
TOP3A-203ENST00000469739 ABCC3O15438 1527 aa12.49□□□□□ -0.41
TOP3A-203ENST00000469739 RRP1P56182 461 aaKnown RBP12.47□□□□□ -0.41
TOP3A-203ENST00000469739 CDCA8Q53HL2 280 aa12.47□□□□□ -0.41
TOP3A-203ENST00000469739 RRP7AQ9Y3A4 280 aaKnown RBP12.47□□□□□ -0.41
TOP3A-203ENST00000469739 ADGRB3O60242 1522 aa12.47□□□□□ -0.41
TOP3A-203ENST00000469739 SIGLEC1Q9BZZ2 1709 aa12.47□□□□□ -0.41
TOP3A-203ENST00000469739 APAF1O14727 1248 aa12.47□□□□□ -0.41
TOP3A-203ENST00000469739 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
TOP3A-203ENST00000469739 MYOM2P54296 1465 aa12.47□□□□□ -0.41
TOP3A-203ENST00000469739 SCAF11Q99590 1463 aaKnown RBP12.47□□□□□ -0.41
TOP3A-203ENST00000469739 NPATQ14207 1427 aa12.47□□□□□ -0.41
TOP3A-203ENST00000469739 IDI1Q13907 227 aa12.46□□□□□ -0.41
TOP3A-203ENST00000469739 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
TOP3A-203ENST00000469739 TSPOAP1O95153 1857 aa12.46□□□□□ -0.41
TOP3A-203ENST00000469739 C20orf194Q5TEA3 1177 aa12.46□□□□□ -0.42
TOP3A-203ENST00000469739 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-203ENST00000469739 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
TOP3A-203ENST00000469739 PPLO60437 1756 aa12.44□□□□□ -0.42
TOP3A-203ENST00000469739 YEATS2Q9ULM3 1422 aa12.44□□□□□ -0.42
TOP3A-203ENST00000469739 STAC3Q96MF2 364 aa12.44□□□□□ -0.42
TOP3A-203ENST00000469739 ZMYM4Q5VZL5 1548 aa12.44□□□□□ -0.42
TOP3A-203ENST00000469739 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
TOP3A-203ENST00000469739 ERICH6BQ5W0A0 696 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms