RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 TSPOAP1O95153 1857 aa20.58■□□□□ 0.88
ABCF3-206ENST00000466742 DCAF11Q8TEB1 546 aa20.58■□□□□ 0.88
ABCF3-206ENST00000466742 GGT6Q6P531 493 aa20.56■□□□□ 0.88
ABCF3-206ENST00000466742 RNF123Q5XPI4 1314 aa20.56■□□□□ 0.88
ABCF3-206ENST00000466742 SPATA31E1Q6ZUB1 1445 aa20.55■□□□□ 0.88
ABCF3-206ENST00000466742 FRAT1Q92837 279 aaPredicted RBP20.55■□□□□ 0.88
ABCF3-206ENST00000466742 RALGAPBQ86X10 1494 aa20.54■□□□□ 0.88
ABCF3-206ENST00000466742 SPHKAPQ2M3C7 1700 aa20.54■□□□□ 0.88
ABCF3-206ENST00000466742 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
ABCF3-206ENST00000466742 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
ABCF3-206ENST00000466742 KDM2AQ9Y2K7 1162 aa20.53■□□□□ 0.88
ABCF3-206ENST00000466742 ABCC3O15438 1527 aa20.52■□□□□ 0.88
ABCF3-206ENST00000466742 PRAG1Q86YV5 1406 aa20.51■□□□□ 0.87
ABCF3-206ENST00000466742 COL17A1Q9UMD9 1497 aaPredicted RBP20.51■□□□□ 0.87
ABCF3-206ENST00000466742 REREQ9P2R6 1566 aa20.51■□□□□ 0.87
ABCF3-206ENST00000466742 NPATQ14207 1427 aa20.5■□□□□ 0.87
ABCF3-206ENST00000466742 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
ABCF3-206ENST00000466742 NEURL4Q96JN8 1562 aa20.49■□□□□ 0.87
ABCF3-206ENST00000466742 CLTCL1P53675 1640 aa20.49■□□□□ 0.87
ABCF3-206ENST00000466742 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
ABCF3-206ENST00000466742 CEP152O94986 1710 aa20.49■□□□□ 0.87
ABCF3-206ENST00000466742 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
ABCF3-206ENST00000466742 NFKBIBQ15653 356 aa20.48■□□□□ 0.87
ABCF3-206ENST00000466742 STAC3Q96MF2 364 aa20.48■□□□□ 0.87
ABCF3-206ENST00000466742 AGLP35573 1532 aa20.47■□□□□ 0.87
ABCF3-206ENST00000466742 ARHGAP31Q2M1Z3 1444 aa20.46■□□□□ 0.87
ABCF3-206ENST00000466742 USP47Q96K76 1375 aa20.46■□□□□ 0.87
ABCF3-206ENST00000466742 CNTLNQ9NXG0 1405 aa20.45■□□□□ 0.86
ABCF3-206ENST00000466742 CCDC184Q52MB2 194 aa20.44■□□□□ 0.86
ABCF3-206ENST00000466742 PDE4AP27815 886 aa20.44■□□□□ 0.86
ABCF3-206ENST00000466742 CARD11Q9BXL7 1154 aa20.44■□□□□ 0.86
ABCF3-206ENST00000466742 ZC3H13Q5T200 1668 aaKnown RBP20.43■□□□□ 0.86
ABCF3-206ENST00000466742 RRP9O43818 475 aaKnown RBP20.43■□□□□ 0.86
ABCF3-206ENST00000466742 BACH2Q9BYV9 841 aa20.43■□□□□ 0.86
ABCF3-206ENST00000466742 DDRGK1Q96HY6 314 aa20.43■□□□□ 0.86
ABCF3-206ENST00000466742 GPRASP1Q5JY77 1395 aa20.43■□□□□ 0.86
ABCF3-206ENST00000466742 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
ABCF3-206ENST00000466742 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
ABCF3-206ENST00000466742 CAMSAP1Q5T5Y3 1602 aa20.42■□□□□ 0.86
ABCF3-206ENST00000466742 NOS1P29475 1434 aa20.42■□□□□ 0.86
ABCF3-206ENST00000466742 ARHGEF40Q8TER5 1519 aa20.41■□□□□ 0.86
ABCF3-206ENST00000466742 MS4A1P11836 297 aa20.41■□□□□ 0.86
ABCF3-206ENST00000466742 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
ABCF3-206ENST00000466742 UGGT1Q9NYU2 1555 aa20.4■□□□□ 0.86
ABCF3-206ENST00000466742 CCDC7Q96M83 1385 aa20.39■□□□□ 0.85
ABCF3-206ENST00000466742 HSP90AA2PQ14568 343 aaPredicted RBP20.38■□□□□ 0.85
ABCF3-206ENST00000466742 FAM9BQ8IZU0 186 aa20.38■□□□□ 0.85
ABCF3-206ENST00000466742 NUDCQ9Y266 331 aa20.37■□□□□ 0.85
ABCF3-206ENST00000466742 ADGRB3O60242 1522 aa20.35■□□□□ 0.85
ABCF3-206ENST00000466742 NBPF1Q3BBV0 1214 aa20.35■□□□□ 0.85
ABCF3-206ENST00000466742 LAMC1P11047 1609 aa20.35■□□□□ 0.85
ABCF3-206ENST00000466742 MADDQ8WXG6 1647 aa20.34■□□□□ 0.85
ABCF3-206ENST00000466742 ARID4BQ4LE39 1312 aaPredicted RBP20.34■□□□□ 0.85
ABCF3-206ENST00000466742 MYOM2P54296 1465 aa20.34■□□□□ 0.85
ABCF3-206ENST00000466742 PRKRIP1Q9H875 184 aaPredicted RBP20.33■□□□□ 0.85
ABCF3-206ENST00000466742 KIF7Q2M1P5 1343 aa20.33■□□□□ 0.85
ABCF3-206ENST00000466742 MRS2Q9HD23 443 aa20.33■□□□□ 0.84
ABCF3-206ENST00000466742 RRAGDQ9NQL2 400 aaPredicted RBP20.33■□□□□ 0.84
ABCF3-206ENST00000466742 KIF1BO60333 1816 aa20.32■□□□□ 0.84
ABCF3-206ENST00000466742 SIGLEC1Q9BZZ2 1709 aa20.31■□□□□ 0.84
ABCF3-206ENST00000466742 ST20-MTHFSA0A0A6YYL1 179 aa20.31■□□□□ 0.84
ABCF3-206ENST00000466742 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
ABCF3-206ENST00000466742 SYNMO15061 1565 aa20.31■□□□□ 0.84
ABCF3-206ENST00000466742 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
ABCF3-206ENST00000466742 RPGRIP1LQ68CZ1 1315 aa20.29■□□□□ 0.84
ABCF3-206ENST00000466742 HSP90AA1P07900 732 aaKnown RBP20.28■□□□□ 0.84
ABCF3-206ENST00000466742 NRXN1Q9ULB1 1477 aa20.28■□□□□ 0.84
ABCF3-206ENST00000466742 MROH2AA6NES4 1674 aa20.27■□□□□ 0.84
ABCF3-206ENST00000466742 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
ABCF3-206ENST00000466742 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.84
ABCF3-206ENST00000466742 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
ABCF3-206ENST00000466742 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
ABCF3-206ENST00000466742 IDI1Q13907 227 aa20.25■□□□□ 0.83
ABCF3-206ENST00000466742 IFT172Q9UG01 1749 aa20.25■□□□□ 0.83
ABCF3-206ENST00000466742 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
ABCF3-206ENST00000466742 PREX1Q8TCU6 1659 aa20.24■□□□□ 0.83
ABCF3-206ENST00000466742 KIAA1210Q9ULL0 1709 aa20.23■□□□□ 0.83
ABCF3-206ENST00000466742 MLECQ14165 292 aa20.22■□□□□ 0.83
ABCF3-206ENST00000466742 CFAP65Q6ZU64 1925 aaKnown RBP20.22■□□□□ 0.83
ABCF3-206ENST00000466742 FBXO31Q5XUX0 539 aaPredicted RBP20.21■□□□□ 0.83
ABCF3-206ENST00000466742 SCAF11Q99590 1463 aaKnown RBP20.2■□□□□ 0.82
ABCF3-206ENST00000466742 NAP1L5Q96NT1 182 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-206ENST00000466742 TESK2Q96S53 571 aa20.2■□□□□ 0.82
ABCF3-206ENST00000466742 CLTCQ00610 1675 aaKnown RBP20.2■□□□□ 0.82
ABCF3-206ENST00000466742 PIK3C2GO75747 1445 aa20.19■□□□□ 0.82
ABCF3-206ENST00000466742 FRAT2O75474 233 aaPredicted RBP20.19■□□□□ 0.82
ABCF3-206ENST00000466742 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
ABCF3-206ENST00000466742 CFAP70Q5T0N1 1121 aa20.18■□□□□ 0.82
ABCF3-206ENST00000466742 ESF1Q9H501 851 aaKnown RBP20.18■□□□□ 0.82
ABCF3-206ENST00000466742 PPLO60437 1756 aa20.17■□□□□ 0.82
ABCF3-206ENST00000466742 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
ABCF3-206ENST00000466742 CLCN1P35523 988 aa20.16■□□□□ 0.82
ABCF3-206ENST00000466742 PNNQ9H307 717 aaKnown RBP20.16■□□□□ 0.82
ABCF3-206ENST00000466742 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
ABCF3-206ENST00000466742 IQGAP1P46940 1657 aa20.16■□□□□ 0.82
ABCF3-206ENST00000466742 ZFYVE9O95405 1425 aa20.16■□□□□ 0.82
ABCF3-206ENST00000466742 NEXMIFQ5QGS0 1516 aa20.16■□□□□ 0.82
ABCF3-206ENST00000466742 RBM10P98175 930 aaKnown RBP20.16■□□□□ 0.82
ABCF3-206ENST00000466742 L1TD1Q5T7N2 865 aaKnown RBP20.15■□□□□ 0.82
ABCF3-206ENST00000466742 C14orf93Q9H972 538 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms