RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 LHX6Q9UPM6 363 aa10.05□□□□□ -0.8
CDKN3-205ENST00000458126 UHRF1BP1LA0JNW5 1464 aa10.04□□□□□ -0.8
CDKN3-205ENST00000458126 PBX2P40425 430 aa10.03□□□□□ -0.8
CDKN3-205ENST00000458126 FANCAO15360 1455 aa10.03□□□□□ -0.8
CDKN3-205ENST00000458126 RUSC2Q8N2Y8 1516 aa10.02□□□□□ -0.8
CDKN3-205ENST00000458126 ARHGEF40Q8TER5 1519 aa10.02□□□□□ -0.8
CDKN3-205ENST00000458126 FHAD1B1AJZ9 1412 aa10.02□□□□□ -0.81
CDKN3-205ENST00000458126 PTPRGP23470 1445 aa10.02□□□□□ -0.81
CDKN3-205ENST00000458126 CEBPAP49715 358 aaPredicted RBP10.02□□□□□ -0.81
CDKN3-205ENST00000458126 RAPGEF6Q8TEU7 1601 aa10.02□□□□□ -0.81
CDKN3-205ENST00000458126 CDK12Q9NYV4 1490 aaPredicted RBP10.02□□□□□ -0.81
CDKN3-205ENST00000458126 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
CDKN3-205ENST00000458126 CPS1P31327 1500 aa10.02□□□□□ -0.81
CDKN3-205ENST00000458126 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
CDKN3-205ENST00000458126 LRRC7Q96NW7 1537 aa10.01□□□□□ -0.81
CDKN3-205ENST00000458126 RAPGEF3O95398 923 aa10□□□□□ -0.81
CDKN3-205ENST00000458126 OXER1Q8TDS5 423 aa10□□□□□ -0.81
CDKN3-205ENST00000458126 BBXQ8WY36 941 aaPredicted RBP10□□□□□ -0.81
CDKN3-205ENST00000458126 KDM5BQ9UGL1 1544 aa10□□□□□ -0.81
CDKN3-205ENST00000458126 PTGER2P43116 358 aa9.99□□□□□ -0.81
CDKN3-205ENST00000458126 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
CDKN3-205ENST00000458126 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
CDKN3-205ENST00000458126 MFSD10Q14728 455 aa9.97□□□□□ -0.81
CDKN3-205ENST00000458126 LSM11P83369 360 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDKN3-205ENST00000458126 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
CDKN3-205ENST00000458126 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.82
CDKN3-205ENST00000458126 FRMPD1Q5SYB0 1578 aa9.96□□□□□ -0.82
CDKN3-205ENST00000458126 CAMSAP1Q5T5Y3 1602 aa9.96□□□□□ -0.82
CDKN3-205ENST00000458126 ARHGEF12Q9NZN5 1544 aa9.95□□□□□ -0.82
CDKN3-205ENST00000458126 SIGLEC1Q9BZZ2 1709 aa9.94□□□□□ -0.82
CDKN3-205ENST00000458126 ABCA10Q8WWZ4 1543 aa9.94□□□□□ -0.82
CDKN3-205ENST00000458126 PRELPP51888 382 aa9.94□□□□□ -0.82
CDKN3-205ENST00000458126 ANKRD13DQ6ZTN6 518 aa9.94□□□□□ -0.82
CDKN3-205ENST00000458126 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
CDKN3-205ENST00000458126 ARHGAP33O14559 1287 aa9.93□□□□□ -0.82
CDKN3-205ENST00000458126 ZNF772Q68DY9 489 aaPredicted RBP9.93□□□□□ -0.82
CDKN3-205ENST00000458126 POTEEQ6S8J3 1075 aa9.93□□□□□ -0.82
CDKN3-205ENST00000458126 NHSL1Q5SYE7 1610 aa9.93□□□□□ -0.82
CDKN3-205ENST00000458126 RXRBP28702 533 aa9.92□□□□□ -0.82
CDKN3-205ENST00000458126 MLECQ14165 292 aa9.92□□□□□ -0.82
CDKN3-205ENST00000458126 PPP4R3BQ5MIZ7 849 aa9.92□□□□□ -0.82
CDKN3-205ENST00000458126 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
CDKN3-205ENST00000458126 ZCCHC11Q5TAX3 1644 aaKnown RBP9.91□□□□□ -0.82
CDKN3-205ENST00000458126 UACAQ9BZF9 1416 aa9.9□□□□□ -0.82
CDKN3-205ENST00000458126 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
CDKN3-205ENST00000458126 RNF166Q96A37 237 aaPredicted RBP9.9□□□□□ -0.82
CDKN3-205ENST00000458126 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
CDKN3-205ENST00000458126 TOP2AP11388 1531 aaKnown RBP9.9□□□□□ -0.82
CDKN3-205ENST00000458126 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.89□□□□□ -0.83
CDKN3-205ENST00000458126 AXIN2Q9Y2T1 843 aa9.89□□□□□ -0.83
CDKN3-205ENST00000458126 AKNAQ7Z591 1439 aa9.89□□□□□ -0.83
CDKN3-205ENST00000458126 SHANK2Q9UPX8 1470 aa9.87□□□□□ -0.83
CDKN3-205ENST00000458126 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
CDKN3-205ENST00000458126 TNIKQ9UKE5 1360 aa9.87□□□□□ -0.83
CDKN3-205ENST00000458126 PLA2R1Q13018 1463 aa9.86□□□□□ -0.83
CDKN3-205ENST00000458126 TCOF1Q13428 1488 aaKnown RBP9.86□□□□□ -0.83
CDKN3-205ENST00000458126 TK2O00142 265 aa9.86□□□□□ -0.83
CDKN3-205ENST00000458126 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
CDKN3-205ENST00000458126 MAP3K9P80192 1104 aa9.85□□□□□ -0.83
CDKN3-205ENST00000458126 EVI5O60447 810 aa9.84□□□□□ -0.83
CDKN3-205ENST00000458126 ADGRD1Q6QNK2 874 aa9.84□□□□□ -0.83
CDKN3-205ENST00000458126 ATAD2Q6PL18 1390 aa9.84□□□□□ -0.83
CDKN3-205ENST00000458126 TTBK1Q5TCY1 1321 aaPredicted RBP9.83□□□□□ -0.84
CDKN3-205ENST00000458126 RGS12O14924 1447 aa9.83□□□□□ -0.84
CDKN3-205ENST00000458126 FOSBP53539 338 aa9.83□□□□□ -0.84
CDKN3-205ENST00000458126 ZNF454Q8N9F8 522 aa9.83□□□□□ -0.84
CDKN3-205ENST00000458126 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
CDKN3-205ENST00000458126 EMILIN3Q9NT22 766 aa9.83□□□□□ -0.84
CDKN3-205ENST00000458126 CAMK2BQ13554 666 aa9.82□□□□□ -0.84
CDKN3-205ENST00000458126 RNF17Q9BXT8 1623 aaKnown RBP9.82□□□□□ -0.84
CDKN3-205ENST00000458126 NEO1Q92859 1461 aa9.81□□□□□ -0.84
CDKN3-205ENST00000458126 PSEN2P49810 448 aa9.81□□□□□ -0.84
CDKN3-205ENST00000458126 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
CDKN3-205ENST00000458126 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
CDKN3-205ENST00000458126 RAPGEF2Q9Y4G8 1499 aa9.8□□□□□ -0.84
CDKN3-205ENST00000458126 NUTM2BA6NNL0 878 aaPredicted RBP9.8□□□□□ -0.84
CDKN3-205ENST00000458126 NUTM2EB1AL46 878 aaPredicted RBP9.8□□□□□ -0.84
CDKN3-205ENST00000458126 NUTM2DQ5VT03 806 aaPredicted RBP9.8□□□□□ -0.84
CDKN3-205ENST00000458126 NUTM2AQ8IVF1 878 aaPredicted RBP9.8□□□□□ -0.84
CDKN3-205ENST00000458126 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
CDKN3-205ENST00000458126 EP400Q96L91 3159 aa9.79□□□□□ -0.84
CDKN3-205ENST00000458126 HRO43593 1189 aa9.78□□□□□ -0.84
CDKN3-205ENST00000458126 HRCP23327 699 aa9.78□□□□□ -0.84
CDKN3-205ENST00000458126 CCDC125Q86Z20 511 aa9.78□□□□□ -0.84
CDKN3-205ENST00000458126 KCNK17Q96T54 332 aa9.78□□□□□ -0.84
CDKN3-205ENST00000458126 SLC4A5Q9BY07 1137 aa9.78□□□□□ -0.84
CDKN3-205ENST00000458126 ERICH3Q5RHP9 1530 aa9.77□□□□□ -0.84
CDKN3-205ENST00000458126 FAM135BQ49AJ0 1406 aa9.77□□□□□ -0.85
CDKN3-205ENST00000458126 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
CDKN3-205ENST00000458126 C3P01024 1663 aa9.77□□□□□ -0.85
CDKN3-205ENST00000458126 PTPREP23469 700 aa9.76□□□□□ -0.85
CDKN3-205ENST00000458126 ZFYVE16Q7Z3T8 1539 aa9.76□□□□□ -0.85
CDKN3-205ENST00000458126 BCL9LQ86UU0 1499 aa9.75□□□□□ -0.85
CDKN3-205ENST00000458126 PAXIP1Q6ZW49 1069 aaPredicted RBP9.75□□□□□ -0.85
CDKN3-205ENST00000458126 EFCAB5A4FU69 1503 aa9.75□□□□□ -0.85
CDKN3-205ENST00000458126 FHOD3Q2V2M9 1422 aa9.74□□□□□ -0.85
CDKN3-205ENST00000458126 VPS9D1Q9Y2B5 631 aa9.74□□□□□ -0.85
CDKN3-205ENST00000458126 LRP6O75581 1613 aa9.74□□□□□ -0.85
CDKN3-205ENST00000458126 RICTORQ6R327 1708 aa9.73□□□□□ -0.85
CDKN3-205ENST00000458126 ZMYM4Q5VZL5 1548 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms